prot_Ecto-sp13_S_contig7269.18413.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7269.18413.1
Unique Nameprot_Ecto-sp13_S_contig7269.18413.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length280
Homology
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: A0A6H5K9Y9_9PHAE (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y9_9PHAE)

HSP 1 Score: 468 bits (1203), Expect = 3.900e-162
Identity = 261/324 (80.56%), Postives = 264/324 (81.48%), Query Frame = 0
Query:    1 RAPRVFLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXX---------------------SAGGADKDVELRVECLTRRQPGIGGGG--EVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRN---------------------GDRSLPDIVFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            RAPRV+LNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATS                             S  GADK VELRVECLTRRQPGIGGGG  EVEDVD PEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKG VSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTL+SYLR+                     GD SLPDIVFVCKERDVDAPPLLEALAEYEQA SEERRQDHVNSS GSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL
Sbjct:  142 RAPRVYLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSSSTSSSSRLERSGEKIGSGRGGRRGRGKRSTVGADKVVELRVECLTRRQPGIGGGGDGEVEDVDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLASYLRSLELRQSSCDLSSIIGLARDRGGDLSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEERRQDHVNSSDGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 465          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: D7G8G1_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G1_ECTSI)

HSP 1 Score: 404 bits (1039), Expect = 8.040e-140
Identity = 225/291 (77.32%), Postives = 234/291 (80.41%), Query Frame = 0
Query:   32 MRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXX-------------------SAGGADKDVELRVECLTRRQPGIGGGG--EVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRN---------------------GDRSLPDIVFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            MRLRDG+PVRVFDGVNGEFLAAVATS                           SAGGA+K +ELRVECLTRRQPGIGGGG  EVED+D PEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKG VSDASMLDRLGAVTAVEAAEQCERMTVPP+ASPVTL+SYLR+                     GDRSLPDIVFVCKERDVDAPPLLEALAEYEQA SE+RRQDHVNSS  +RNANAAFLIGPEGGFDPDEIG LAQYPFVRFVSLGRTVLRAETAAVYAL
Sbjct:    1 MRLRDGNPVRVFDGVNGEFLAAVATSSSSSSRLERSGEKIGSGRGGRRGRGKRSAGGAEKVIELRVECLTRRQPGIGGGGGGEVEDLDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPMASPVTLASYLRSLELRHSSCDGSSIVGLARDRDGDRSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEQRRQDHVNSSDDNRNANAAFLIGPEGGFDPDEIGTLAQYPFVRFVSLGRTVLRAETAAVYAL 291          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: A0A835ZHN8_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN8_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.470e-40
Identity = 110/255 (43.14%), Postives = 146/255 (57.25%), Query Frame = 0
Query:   32 MRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXXSAGG---ADKDVELRVECLTRRQPGIGGGGEVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYL---RNGDRSLPDIVFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            MRLRDGS VR F+G +GE+L  ++ +        +  G   A   + L+VE   R Q          D+D   + L+ API++QR+K+LVEKA E+G + + PVLTA TQ+    DA    RL  + A+EAAEQCER+++P +  P  L   L    +   +    +FVC+ER   +PPLLEALA    A         V SS     A AAFL+GPEGGF  DE   LA  P+++ VSLG TVLRAETAA+YAL
Sbjct:    1 MRLRDGSTVRAFNGRDGEYLCTLSQTDGSSSSKPAGKGRRSAKPALALQVEQQLRSQ----AEDSCADLD---VWLLCAPIKRQRMKLLVEKATELGVTCIAPVLTAHTQEAL--DAEGTSRLLPI-AIEAAEQCERLSLPHLHPPAPLPELLARWHSEPHTRARQLFVCQERSPQSPPLLEALAAASAARG-------VPSSA----APAAFLVGPEGGFSADEREMLAGLPWIQGVSLGATVLRAETAALYAL 234          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: W7TJZ1_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJZ1_9STRA)

HSP 1 Score: 149 bits (376), Expect = 2.490e-38
Identity = 102/283 (36.04%), Postives = 156/283 (55.12%), Query Frame = 0
Query:    1 RAPRVFLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXXSAGGADKDVELR---VECLTRRQPGIGGGGEVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRNGDRSLPDIVFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            R+PR+++  A L     V ++ +Q  YL+ VMRLR G+ VRVF+  +GE++A VA            G +DK    R   V  + + +   GGG +  D    ++ L FAP+++ RLK+L EKA E+G + L PVLT  T         M+ ++     VEAAEQCER+ VP V   +T  + L   +R     +++C+ER+  A P++E L    + ++E+R+        G+     + +IGPEGGF P E+ A+  +P  R VSLG +VLRAETA + A+
Sbjct:  156 RSPRLYVPEALLGKHVPVPISTDQRHYLLKVMRLRPGAYVRVFNRRDGEWIAVVADEAPDMEPKREIGRSDKKRTRRGSDVSLIAKARIREGGGEQRNDEGESKLRLCFAPLKRARLKILFEKATEMGVTHLQPVLTEHTDVAPRHAEEMMKKMEGGL-VEAAEQCERIGVPEVLPAMTFDALLEE-ERGGGGRLYICRERE-GARPIMEVLERDWKEINEDRKNGKKEEHRGT----PSIVIGPEGGFSPRELAAMKGHP--RLVSLGPSVLRAETAGLVAV 429          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: A0A199YJ05_9PROT (Ribosomal RNA small subunit methyltransferase E n=12 Tax=Thalassospira TaxID=168934 RepID=A0A199YJ05_9PROT)

HSP 1 Score: 142 bits (357), Expect = 2.960e-37
Identity = 106/265 (40.00%), Postives = 144/265 (54.34%), Query Frame = 0
Query:   18 VQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXXSAGGADKDVELRVECLTRRQPGIGGGGEVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRNGDRSLPDI--VFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            ++L PEQ+ YL  VMRL+ G+PV++F+G++GE+L  ++            G    + +LR +           G EV         LVFAPI+KQRL  L+EKAVE+GA  L PV+T   Q G ++D   LDRL A   +EAAEQCER+TVP V  PV L  ++ N    LP+   +  C E      P+ E L++   A       D+ N        N A +IGPEGGF  DE+  + + PF   VSLG  +LRAETAA+ AL
Sbjct:   24 IELAPEQSHYLEHVMRLKPGTPVKIFNGLDGEWLGTISE------LRKKKGSVTAERQLRAQ-----------GNEVGPT------LVFAPIKKQRLDFLIEKAVELGAQSLQPVIT---QHG-ITDKVRLDRLQAQV-IEAAEQCERLTVPEVCEPVRLLDWVAN----LPENHHLLFCDETG-SGSPIGEVLSQL-LAKGAGSFIDNTNV------VNHAIVIGPEGGFSADELERIRKQPFATPVSLGPRILRAETAAIAAL 248          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: A0A367XFC7_9PROT (Ribosomal RNA small subunit methyltransferase E n=5 Tax=Thalassospira TaxID=168934 RepID=A0A367XFC7_9PROT)

HSP 1 Score: 141 bits (356), Expect = 4.170e-37
Identity = 102/277 (36.82%), Postives = 147/277 (53.07%), Query Frame = 0
Query:    4 RVFLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXXSAGGADKDVELRVECLTRRQPGIGGGGEVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRNGDRSLPDIVFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            R+F++ A +  G  + L+PEQ+ YL  VMRL+ G+PV++F+G +GE+LA ++                K   + VE   R Q    G             L FAPI+KQRL  L+EK+VE+G +RL P++TA +    ++D   LDRL A   +EAAEQ ER+ VP + +PV L  +L N   +    +  C E    +P     + EY   L+E   +   +    +   N   +IGPEGGF PDEI  + +  F   VSLG  +LRAETAA+ AL
Sbjct:   11 RLFVSDA-ITAGAEMALSPEQSHYLEHVMRLKPGTPVKIFNGADGEWLATISELRK------------KKGAVTVESRLRDQQNSTGPA-----------LAFAPIKKQRLDFLIEKSVELGVTRLMPIITAHS----ITDKVRLDRLQAQV-IEAAEQSERLDVPEIDAPVKLYDWLANWPEN--SHLLFCDETGSGSP-----IGEY---LTESLAKPAGSVIDNNNVVNHTLVIGPEGGFAPDEIDRIRKQSFATAVSLGPRILRAETAAIAAL 248          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: UPI00143106BB (16S rRNA (uracil(1498)-N(3))-methyltransferase n=2 Tax=Thalassospira TaxID=168934 RepID=UPI00143106BB)

HSP 1 Score: 141 bits (356), Expect = 4.170e-37
Identity = 105/266 (39.47%), Postives = 141/266 (53.01%), Query Frame = 0
Query:   15 GQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXXSAGGADKDVELRVECLTRRQPGIGGGGEVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRNGDRSLPDIVFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            G  ++L PEQ+ YL  VMRL+ G+PV++F+G++GE+L  +             G    D +LR +           G EV         LVFAPI+KQRL  L+EKAVE+G  RL PV+T   Q G ++D   LDRL +   +EAAEQCER+TVP V  PV L  ++ N   S    +  C E      P+ E L++   A       D+ N        N A +IGPEGGF  DE+  + +  F   VSLG  +LRAETAA+ AL
Sbjct:   21 GSEIELAPEQSHYLEHVMRLKPGTPVKIFNGLDGEWLGTIIA------LRKKKGSVTADRQLREQ-----------GSEVGPT------LVFAPIKKQRLDFLIEKAVELGVERLQPVIT---QHG-ITDKVRLDRLQSQV-IEAAEQCERLTVPEVCEPVRLLDWVANVPES--HHLLFCDETG-SGSPIGEVLSQL-LAKGAGSVIDNTNV------VNHAIVIGPEGGFSADELERIRKQSFATPVSLGPRILRAETAAIAAL 248          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: A0A4D9D730_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D730_9STRA)

HSP 1 Score: 149 bits (375), Expect = 7.930e-37
Identity = 102/283 (36.04%), Postives = 155/283 (54.77%), Query Frame = 0
Query:    1 RAPRVFLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXXSAGGADKDVELR---VECLTRRQPGIGGGGEVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRNGDRSLPDIVFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            R+PR+++  A L     V ++ +Q  YL+ VMRLR G+ VRVF+  +GE++A +A            G +DK    R   V  + + Q   GGG +  D    ++ L FAP+++ RLK+L EKA E+G + L PVLT  T         M+ ++     VEAAEQCER+ VP V   +T  + L   +R     +++C+ER   A P++E L    + ++E+R+        G+     + +IGPEGGF P E+ A+  +P  R VSLG +VLRAETA + A+
Sbjct:  607 RSPRLYVPEALLGRHVPVPISADQRHYLLKVMRLRPGAYVRVFNRRDGEWIAVIADEAPDMEPKREIGRSDKKRTRRGSDVSLIAKAQIREGGGEQRNDEGESKLRLCFAPLKRARLKILFEKATEMGVTHLQPVLTEYTDVAPRHAEEMMTKMERGL-VEAAEQCERIGVPEVLPAMTFDALLEE-ERDGGGRLYICRERG-GARPIMEVLERDSKEINEDRKNGKKEEHRGT----PSIVIGPEGGFSPRELAAMKGHP--RLVSLGPSVLRAETAGLVAV 880          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: K2LDN9_9PROT (Ribosomal RNA small subunit methyltransferase E n=9 Tax=Thalassospiraceae TaxID=2844866 RepID=K2LDN9_9PROT)

HSP 1 Score: 139 bits (349), Expect = 4.530e-36
Identity = 105/265 (39.62%), Postives = 144/265 (54.34%), Query Frame = 0
Query:   18 VQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXXSAGGADKDVELRVECLTRRQPGIGGGGEVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRNGDRSLPDI--VFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            ++L PEQ+ YL  VMRL+ G+PV++F+G++GE+L  ++            G    + +LR +           G E+         LVFAPI+KQRL  L+EKAVE+G  +L PV+T   Q G ++D   LDRL A   VEAAEQCER+TVP V  PV L  ++ N    LP+   +  C E      P+ E L++   A       D+ N        N A +IGPEGGF  DE+  + + PF   VSLG  +LRAETAA+ AL
Sbjct:   24 IELAPEQSHYLEHVMRLKPGTPVKIFNGLDGEWLGTISE------LRKKKGRVTAEQQLREQ-----------GQELGPT------LVFAPIKKQRLDFLIEKAVELGVEKLQPVIT---QHG-ITDKVRLDRLQAQV-VEAAEQCERLTVPEVCEPVRLLDWVAN----LPENHRLLFCDETG-SGSPIGEVLSQL-LAKGAGSFIDNTNV------VNHAIVIGPEGGFSADELERIRKQPFATPVSLGPRILRAETAAIAAL 248          
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Match: A0A8J6LQW5_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Euryhalocaulis TaxID=1712422 RepID=A0A8J6LQW5_9PROT)

HSP 1 Score: 137 bits (345), Expect = 9.560e-36
Identity = 104/278 (37.41%), Postives = 141/278 (50.72%), Query Frame = 0
Query:    3 PRVFLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSXXXXXXXXSAGGADKDVELRVECLTRRQPGIGGGGEVEDVDTPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDRLGAVTAVEAAEQCERMTVPPVASPVTLSSYLRNGDRSLPDIVFVCKERDVDAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYAL 280
            PR+F++ A L  G  + L  +Q  YLV+VMR +DG PVRVF+G +GE+ A VA           A      ++L  +   +  P             P++ L+FAP++K R   +VEKA E+GA+R+ PV T  T     S+   +DR+ A+ A EAAEQ ER+ +P +A   TL   L   D + P  +  C E   + PP+L+AL                   GG      A LIGPEGGF  DE   L    FVR VSLG  +LRA+TAA  AL
Sbjct:    5 PRLFIDAA-LGKGAEIALEKDQAHYLVNVMRRKDGDPVRVFNGKDGEWRAEVA----------QATKRAATIKLAEQTRPQHAP-------------PDLWLLFAPVKKSRTDFIVEKATELGAARIAPVFTRYTN----SERVRMDRMEAL-AREAAEQTERLDLPDIAEARTLDQALDGWDAARP--LIYCDEGG-EVPPMLKAL-------------------GGLETGKLAVLIGPEGGFSEDERARLKSLDFVRPVSLGPRILRADTAAAAAL 231          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7269.18413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Y9_9PHAE3.900e-16280.5616S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
D7G8G1_ECTSI8.040e-14077.3216S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A835ZHN8_9STRA1.470e-4043.1416S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
W7TJZ1_9STRA2.490e-3836.0416S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A199YJ05_9PROT2.960e-3740.00Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A367XFC7_9PROT4.170e-3736.82Ribosomal RNA small subunit methyltransferase E n=... [more]
UPI00143106BB4.170e-3739.4716S rRNA (uracil(1498)-N(3))-methyltransferase n=2... [more]
A0A4D9D730_9STRA7.930e-3736.0416S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
K2LDN9_9PROT4.530e-3639.62Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A8J6LQW5_9PROT9.560e-3637.41Ribosomal RNA small subunit methyltransferase E n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029026tRNA (guanine-N1-)-methyltransferase, N-terminalGENE3D3.40.1280.10coord: 98..280
e-value: 7.1E-36
score: 125.3
IPR006700Ribosomal RNA small subunit methyltransferase EPIRSFPIRSF015601MTase_slr0722coord: 1..280
e-value: 4.8E-40
score: 135.3
IPR006700Ribosomal RNA small subunit methyltransferase EPFAMPF04452Methyltrans_RNAcoord: 18..280
e-value: 6.4E-40
score: 136.9
IPR006700Ribosomal RNA small subunit methyltransferase ETIGRFAMTIGR00046TIGR00046coord: 101..280
e-value: 2.7E-22
score: 77.2
IPR006700Ribosomal RNA small subunit methyltransferase EPANTHERPTHR30027RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE Ecoord: 3..280
NoneNo IPR availableGENE3D2.40.240.20coord: 4..65
e-value: 4.8E-13
score: 50.5
IPR015947PUA-like superfamilySUPERFAMILY88697PUA domain-likecoord: 3..60
IPR029028Alpha/beta knot methyltransferasesSUPERFAMILY75217alpha/beta knotcoord: 100..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7269contigEcto-sp13_S_contig7269:3310..4269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7269.18413.1mRNA_Ecto-sp13_S_contig7269.18413.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7269 3310..4269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7269.18413.1 ID=prot_Ecto-sp13_S_contig7269.18413.1|Name=mRNA_Ecto-sp13_S_contig7269.18413.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=280bp
RAPRVFLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEF
LAAVATSSSSSSRKRSAGGADKDVELRVECLTRRQPGIGGGGEVEDVDTP
EIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGTVSDASMLDR
LGAVTAVEAAEQCERMTVPPVASPVTLSSYLRNGDRSLPDIVFVCKERDV
DAPPLLEALAEYEQALSEERRQDHVNSSGGSRNANAAFLIGPEGGFDPDE
IGALAQYPFVRFVSLGRTVLRAETAAVYAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029026tRNA_m1G_MTases_N
IPR006700rRNA_ssu_MeTrfase-E
IPR015947PUA-like_sf
IPR029028Alpha/beta_knot_MTases