prot_Ecto-sp13_S_contig7265.18408.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7265.18408.1
Unique Nameprot_Ecto-sp13_S_contig7265.18408.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length197
Homology
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BLAST of mRNA_Ecto-sp13_S_contig7265.18408.1 vs. uniprot
Match: D7G8F1_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8F1_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 5.020e-35
Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 0 
Query:    1 MPWPTCKGPSRLSYGSTPVQHPGDGAFVGFDAIFGCNGAVFSVSKADDASGGIPAAASSLGGGATGGTGRGMADAQAXXXXXXXXLRSARFE 92
            MPWPTCKGPSRLSYGSTPVQHPG GAF GFDAIFGCNGAV SVS ADDASGG+PAAA+SLGGGATGG GRGM DAQAXXXXXXXX  SAR +
Sbjct:  373 MPWPTCKGPSRLSYGSTPVQHPGGGAFGGFDAIFGCNGAVSSVSTADDASGGVPAAAASLGGGATGGAGRGMTDAQAXXXXXXXXXXSARVD 464
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7265.18408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8F1_ECTSI5.020e-3586.96Putative NIN-like transcription factor n=1 Tax=Ect... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7265contigEcto-sp13_S_contig7265:5175..5765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7265.18408.1mRNA_Ecto-sp13_S_contig7265.18408.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7265 5148..5765 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7265.18408.1 ID=prot_Ecto-sp13_S_contig7265.18408.1|Name=mRNA_Ecto-sp13_S_contig7265.18408.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=197bp
MPWPTCKGPSRLSYGSTPVQHPGDGAFVGFDAIFGCNGAVFSVSKADDAS
GGIPAAASSLGGGATGGTGRGMADAQAGVAEAQAGLRSARFEELCALDRL
LFGDRSLSPPAAATAAVAAAAPGTVAASAVAATAASGSCAAGRLSDIARR
TTGCANGATNLNPESAASAFLGRVGDKASSPAHVGADPWRVDATRQ*
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