prot_Ecto-sp13_S_contig1219.1837.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1219.1837.1
Unique Nameprot_Ecto-sp13_S_contig1219.1837.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length323
Homology
BLAST of mRNA_Ecto-sp13_S_contig1219.1837.1 vs. uniprot
Match: D7FZT2_ECTSI (DM13 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT2_ECTSI)

HSP 1 Score: 483 bits (1243), Expect = 2.600e-170
Identity = 251/267 (94.01%), Postives = 260/267 (97.38%), Query Frame = 0
Query:   56 PDDIETQERTESDSTTAEELSILKTATLSSSEVSGTVSLLSVAADNSSFLALNDFVMNEACDEAEIRLQEAGFTSGTTSGVVVVPLTADTASAVELDFTEPLDEDFEAELYDQVALWCGEAQLSDAVDLVTPTTVGDGGPLLLREAVMSGTSSYTVEGMVQIVGSGSIVDDALITTYSLRFQDIEVSSGPDVFVYLTADLDNPEDVDSEGSLRVELDGAERGTFSFTGNFTDAVPEGFVSPEDYAAAVVWCDQFSAFFGSGLFEDVA 322
            PDDIETQERTES  TTAEELSILKTATLSSSEVSGTVSLLSVAADNSSFLALNDFV+N+ACD+AEIRLQEAGFTSGTTSGVVVVPLTADTASAVELDFTEPLDEDFEAEL+DQVALWCG AQL DAVDLVTPTTVGDGGPLLLREAVMSGTSSYTVEGMVQI+GSGSIVDDAL+TTYSLRFQDIEVSSGPDVF+YLTAD D+PEDVDSEGSLRVELDG ERGTFSFTGNFTDAVPEGF+SPEDYAAAVVWCDQFS FFGSGLFEDVA
Sbjct:   24 PDDIETQERTESGPTTAEELSILKTATLSSSEVSGTVSLLSVAADNSSFLALNDFVINDACDDAEIRLQEAGFTSGTTSGVVVVPLTADTASAVELDFTEPLDEDFEAELFDQVALWCGGAQLGDAVDLVTPTTVGDGGPLLLREAVMSGTSSYTVEGMVQIIGSGSIVDDALVTTYSLRFQDIEVSSGPDVFLYLTADFDDPEDVDSEGSLRVELDGTERGTFSFTGNFTDAVPEGFISPEDYAAAVVWCDQFSVFFGSGLFEDVA 290          
BLAST of mRNA_Ecto-sp13_S_contig1219.1837.1 vs. uniprot
Match: A0A6H5KF23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF23_9PHAE)

HSP 1 Score: 216 bits (550), Expect = 5.060e-67
Identity = 127/167 (76.05%), Postives = 134/167 (80.24%), Query Frame = 0
Query:   16 MEGSKTCYGYPRKRVLFCAVPTVLTIIA---------GVTVLVVLLLRNPDDIETQERTESDSTTAEELSILKTATLSSSEVSGTVSLLSVAADNSSFLALNDFVMNEACDEAEIRLQEAGFTSGTTSGVVVVPLTADTASAVELDFTEPLDEDFEAELYDQVALWC 173
            MEGSKTC GYPRKRVLFC VP VL IIA         G          +PD IET ERTESDSTTAEELSILKTATLSSSEVSGTV LLSVAA NSSF+ALNDFV+NEACDEAEIRLQE GFTSGTTSGV+V+PLTADTASAVELDFTEPLDE+F A L+DQV   C
Sbjct:    1 MEGSKTCCGYPRKRVLFCTVPAVLAIIASHHCQGDRAG----------SPDFIETPERTESDSTTAEELSILKTATLSSSEVSGTVPLLSVAAGNSSFVALNDFVINEACDEAEIRLQEKGFTSGTTSGVIVMPLTADTASAVELDFTEPLDENFAAVLHDQVRALC 157          
BLAST of mRNA_Ecto-sp13_S_contig1219.1837.1 vs. uniprot
Match: A0A1E5QQV7_9CYAN (DM13 domain-containing protein n=2 Tax=Desertifilum sp. IPPAS B-1220 TaxID=1781255 RepID=A0A1E5QQV7_9CYAN)

HSP 1 Score: 52.8 bits (125), Expect = 2.810e-5
Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = 0
Query:  198 LREAVMSGTSSYTVEGMVQIVGSGSIVDDALITTYSLRFQDIEVSSGPDVFVYLTADLDNPEDVDSEGSLRVELDGAERGTFSFTGNFTDAVPEGFVSPEDYAAAVVWCDQFSAFFGS 315
            + E   +GT +Y V G VQ++     ++D  I    L+F D   SSGPD+ VY++ +L +P      G L+     A  G FS+      A+P+ F   +  +  +++C++FSA FGS
Sbjct:    1 MYEGNFNGTRNYRVSGKVQVIQ----LEDKTI----LQFIDFSSSSGPDLKVYISPEL-SPSQFIHLGDLK-----ALNGVFSY------ALPDDFSIEQSGSFVLIYCERFSALFGS 98          
BLAST of mRNA_Ecto-sp13_S_contig1219.1837.1 vs. uniprot
Match: A0A0L0LNG3_9BACT (Putative secreted protein n=1 Tax=Parcubacteria bacterium C7867-007 TaxID=1659201 RepID=A0A0L0LNG3_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 7.820e-5
Identity = 38/125 (30.40%), Postives = 62/125 (49.60%), Query Frame = 0
Query:  195 PLLLREAVMSGTSSYTVEGMVQIVGSGSIVDDALITTYSLRFQDIEVSSGPDVFVYLTADLDNPEDVDSEGSLRVELDGAERGTFSFTGNFTDAVPEGFVSPEDYAAAVVWCDQFSAFFGSGLFE 319
            P+++  A +  T ++   G  +IV S         TTY LR+++++  +GPD++VYL+ DLD  E V S G ++              GN    +P G ++  +Y  A+VWC QF   F S   +
Sbjct:   55 PVIMPAAQIVDTPAHPASGTARIVISKG-------TTY-LRYENLKTINGPDLYVYLSKDLDAKEFV-SLGRIKAT-----------EGNVNYEIP-GNINLTEYPYALVWCKQFGVLFNSAKLQ 158          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1219.1837.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FZT2_ECTSI2.600e-17094.01DM13 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KF23_9PHAE5.060e-6776.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1E5QQV7_9CYAN2.810e-532.20DM13 domain-containing protein n=2 Tax=Desertifilu... [more]
A0A0L0LNG3_9BACT7.820e-530.40Putative secreted protein n=1 Tax=Parcubacteria ba... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019545DM13 domainPFAMPF10517DM13coord: 219..315
e-value: 1.3E-8
score: 35.3
IPR019545DM13 domainPROSITEPS51549DM13coord: 205..319
score: 23.686
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..322
NoneNo IPR availableTMHMMTMhelixcoord: 30..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1219contigEcto-sp13_S_contig1219:494..3426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1219.1837.1mRNA_Ecto-sp13_S_contig1219.1837.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1219 494..3426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1219.1837.1 ID=prot_Ecto-sp13_S_contig1219.1837.1|Name=mRNA_Ecto-sp13_S_contig1219.1837.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=323bp
EGKWREQKGGFVDQAMEGSKTCYGYPRKRVLFCAVPTVLTIIAGVTVLVV
LLLRNPDDIETQERTESDSTTAEELSILKTATLSSSEVSGTVSLLSVAAD
NSSFLALNDFVMNEACDEAEIRLQEAGFTSGTTSGVVVVPLTADTASAVE
LDFTEPLDEDFEAELYDQVALWCGEAQLSDAVDLVTPTTVGDGGPLLLRE
AVMSGTSSYTVEGMVQIVGSGSIVDDALITTYSLRFQDIEVSSGPDVFVY
LTADLDNPEDVDSEGSLRVELDGAERGTFSFTGNFTDAVPEGFVSPEDYA
AAVVWCDQFSAFFGSGLFEDVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019545DM13_domain