mRNA_Ecto-sp13_S_contig7246.18378.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: D8LQN5_ECTSI (Similar to putative chromatin structure regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN5_ECTSI) HSP 1 Score: 481 bits (1239), Expect = 1.490e-165 Identity = 280/283 (98.94%), Postives = 280/283 (98.94%), Query Frame = 1
Query: 745 MHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAAPAPAAGQPQYPAYSGGAYGYNSDQPSYGSQAGYAGAPVPARPGTRW 1593
MHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPAAPAPAAGQPQYPAYSGGAYGYNS QPSYGSQAGYAGAP PARPGTRW
Sbjct: 1 MHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RPAAPAPAAGQPQYPAYSGGAYGYNSGQPSYGSQAGYAGAPAPARPGTRW 282
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: D8LQN4_ECTSI (GTB1 RNA binding / hydrolase, acting on ester bonds, also similar to transcription elogantion facto n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN4_ECTSI) HSP 1 Score: 372 bits (956), Expect = 7.460e-111 Identity = 187/205 (91.22%), Postives = 188/205 (91.71%), Query Frame = 1
Query: 1 NINCQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFN 615
N+N VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYR DRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDK RFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFN
Sbjct: 1348 NLNDSVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYR--------------DRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKGRFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFN 1538
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A6H5L9M6_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M6_9PHAE) HSP 1 Score: 306 bits (785), Expect = 1.150e-93 Identity = 156/174 (89.66%), Postives = 158/174 (90.80%), Query Frame = 1
Query: 4 INCQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDK 525
++ QVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGN E DRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQ GVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDK
Sbjct: 349 LDVQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNDEMINQMVVHVDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQ-----GVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDK 517
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A836C842_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C842_9STRA) HSP 1 Score: 279 bits (713), Expect = 1.000e-78 Identity = 177/505 (35.05%), Postives = 254/505 (50.30%), Query Frame = 1
Query: 4 INCQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEG-GPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQH----RKAINRAGRGGGASSAVQAGVR-YPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTD-------------IKELGKQP------------------GSMLAPRLK-------------------------IGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKS 1332
+ ++ +LDL +A EL+RQG GKR QL+++ +EIR+PYR +RR P+ +D++FEW+TGE DATLR G++V + H GVR +EG L GF+P D + DD LPPD ADL + N + A I + K RFE++LSLR+SDT +P W + W RP SLP +D +F++++ ++E ER+ + + + + GG A G R + RSI+HP F+N T EAE LK ++ G+ +IRPSSK D L++TWMW GEF H + I L MLA R+ GGEEYE LDEI++R ++ ND V ++LA KY EVE + + K AP+ IPYL R G PGY L Y+P +VR ++EV+ +G+ + + +T+PEL WFK N L R+ + S
Sbjct: 510 LKDKLEELDLVEFAGELERQGLGKRRMQLEAVKDEIRFPYR--------------ERRRPFQRASDDDVFEWITGEDDATLRPGMVVTCSVSGHTRGGVRATVEGLSRALLGFIPMDKLQDDPLPPD------ADLALMFPRNSIRSAVIADIRKPRFEVQLSLRRSDTQQNPAAW-----------GTQWRRPMSLPPIDREFDHDKCQREWAERLAETQALLAQVRLQDVAQRGGTGGAPPKGSRIFQRSIVHPNFRNVTFQEAEAKLKAGAEV-GDVIIRPSSKSRDMLTITWMWQPGEFKHIEEEYESLDEIMARYIAPLNXXXXXXXXXXXXXXXXXXLGVAEMLAHRINPLTLIMNKTECSHFVAFHMCAGGPITGGEEYESLDEIMARYIAPLNDGVAEMLAHPKYKDLPRKEVEDLVMEMKRSAPSSIPYLFARHGSPGYFVLFYIPGKSVRSELIEVTDKGFKIRTKELRTVPELVNWFKKNFNNLPPMPRSQQCS 982
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A151ZDL6_9MYCE (Transcription elongation factor spt6 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZDL6_9MYCE) HSP 1 Score: 182 bits (461), Expect = 7.680e-45 Identity = 128/437 (29.29%), Postives = 219/437 (50.11%), Query Frame = 1
Query: 16 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLM-CRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTS 1323
+++LD ++D ++RQ + L I +E+ P+ QD R PY P D++F WLTGE+D T R+G LV V R D ++VRLE G L G + + ++D QK +G + I+ +DK RF++ LS ++SD D +KW+ L F N L DE + K++ +++ R R+++HP + +++ +EAE++LK+ GEA++RPSSKG DH+++T+ + +G +H DIKE K L +G +Y+ LDEI++R V + +N++ + + GT E+++ ++++K + P RIPY + PG+V L ++P T R + + +G+++ K+ F +L +L K+FK N QL +S S
Sbjct: 1039 LDRLDYDHFSDIIERQVGRPMKRTLAFIRKELTNPF--------------QDFRAPYQQPSNDQIFNWLTGESDHTFRKGTLVSVTTNRTFDNAIKVRLENG--LEGSISTNDISDQ-------NDQKTIPRGTT-----LNCRILSIDKDRFQVNLSCKQSDL--DVNKWEQQLS----FDIKMDNENRYLLTGDEVPRPQEVKKKPLPTKRER----------------------RIKRTVVHPLWHSYSCMEAEKYLKDKPV--GEALLRPSSKGFDHITVTFKFWDGIILHHDIKEADKPNAVSLGKSFFMGETKYDSLDEILARHVEYLINNLNEVKSHQYWKNGTQEEIDQLIRQEKINNPKRIPYYFGINQSHPGFVTLYHVPTSTPRHEHIFIKSDGFLLRKKLFHSLNDLIKYFKTNYAQLLQSRAPS 1417
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: F4QFF8_CAVFA (Transcription elongation factor spt6 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QFF8_CAVFA) HSP 1 Score: 178 bits (451), Expect = 1.480e-43 Identity = 133/443 (30.02%), Postives = 211/443 (47.63%), Query Frame = 1
Query: 25 LDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKW------DAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAV-------QAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGV----PGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQL 1302
+DL A+AD L+ + ++ + L I E+ P+ D R Y P D++F WLTGETD T + G LV V +R++ GVR RLE G L +P D ++D TG D K + L + VDK RF + LS + SD D KW D + + P +L + + +G G S A+ + R R+++HP +K+ +EAE++LK+ GEA++RPSS+G DH+++T+ + +G +H DIKE K L +G +++ LDEI++R V + +ND+ + G+ E+++ ++K+K P IPY R G+ PGY+ L ++P+++ R + V PEG+ M K+ + +L EL K FK N QL
Sbjct: 1007 IDLDAFADILESRNNTQKKKVLYMIKNELTSPFA--------------DIRNYYHPPTYDQIFTWLTGETDETFKSGTLVSVSTIRNSPEGVRCRLENG--LEAVIPSDCISD--------TG---DTKSFPRGTTL-SCRVKSVDKERFNVTLSCKPSDM--DISKWEDMIYHDLKMNGDNKYLNLDPTPPTALLTM------------------------TSLSGGNNGNSKALVERRPVPKKEARQKRNVVHPLWKSMNFMEAEKYLKDKPV--GEAILRPSSRGHDHITVTFKFWDGIILHHDIKEADKPNAVSLGKSFYMGETKFDSLDEILARHVEYLINNLNDVKTHRYWKSGSKDEIDEFMRKEKSKNPKHIPY---RFGIAIERPGYIVLYHVPSNSPRHEYILVKPEGFEMRKKMYASLDELIKHFKNNYAQL 1390
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A7S4ELD9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELD9_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.580e-43 Identity = 133/434 (30.65%), Postives = 203/434 (46.77%), Query Frame = 1
Query: 16 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNY-------ERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTR-GEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGV-PGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLN 1290
V +LDL +A ++ G GK ++ I E R P+ D R P T D+LF +TGETD +LR G + +I+ + D G +V+LEG + F+ + DD + + VV ++ A I V K + LSLR+ D + P WD RP SL LDE F+ E+ +E R++ K N+ G G V R+ HP F+N E EE LK GEA+IRPSSK D L++ WM+ +G+ ++ E K + + LKI GE Y +DE++ R ++ NDLV +L+ K+ + ++++ L+K K N IPY +C + PGY +L ++ + T R+ + +SP G+V + FK+L L FK N
Sbjct: 1435 VEELDLDTFAQMIEENGHGKWHSHMEMIKWEFRLPF--------------VDPRNPMDTLAGDKLFRLITGETDQSLRPGKEITGKILANTDFGSKVKLEGD--IPAFISLRNLADDHVEA---------AEDVVGVGTIVTAIITAVKKDHMSVDLSLRREDFIKQPSTWD---------------RPESLTPLDENFDEIACKTIEEKKSKEREARLEAMQIKLSNKVGEDGKRIGRVTR-----RACAHPAFRNAKGTELEEELKSGGPAMVGEALIRPSSKSVDSLAIHWMYSDGKIKIIEVNEEDKDTDASVGNVLKIKGESYGSIDELMGRYIAPMNDLVEELVNHRKFVDRSEDDLDEELRKGKAANKNSIPYNICWMEMHPGYSSLRFILSSTPRQHPIGISPNGFVWGAKTFKSLDILLNDFKKN 1823
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A8J4PXP9_9MYCE (Transcription elongation factor spt6 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PXP9_9MYCE) HSP 1 Score: 177 bits (449), Expect = 2.720e-43 Identity = 124/443 (27.99%), Postives = 220/443 (49.66%), Query Frame = 1
Query: 16 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGV----PGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKS 1332
+++LD A++D L++ + L I E+ P+ D R PY P ++F+WLTGETD TLR G L+ +R+ + V+ RL+ G L G +P D ++D+ D+K + + + +I VDK RF + LS ++SD P +W+ + + + + A L D + + +Q +++ + RK R+++HP + +FT LEAE +L++ GE ++RPSSKG DH+++T+ + + +H DIKE K L +G +++ LDEI++R V + +N++ + GT +E+++ ++++K P R+PY G+ PG++ L ++P T R + + +GYVM K+ F TL +L K+FK N QL ++ +S +
Sbjct: 1065 LDRLDFDAFSDILEKHNGHSVKKMLALIKRELTNPFA--------------DIRSPYRPPNFAQIFQWLTGETDQTLRPGTLISATTIRNFEHNVKCRLDNG--LEGTIPSDNISDN-----------NDVKSLPR-GLTLNCRVINVDKERFGVTLSCKESDL--SPKRWEEKI----FYDLTSNGQNAYLKLDDNPPSLAKLQQSEKKKPVKKERKV--------------------KRTVIHPLWHSFTCLEAENYLRDKQI--GEPILRPSSKGFDHITVTFKFWDDIILHHDIKEADKPNAVSLGKSFYMGDVKFDSLDEILARHVEYLINNLNEIRNHQYWKNGTKSEIDEMIKQEKLKNPKRLPYYF---GIDHQHPGFIILYHVPTSTPRHEPILIKSDGYVMRKQNFPTLNDLIKFFKQNYAQLLQNKPSSNST 1448
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A7M7PAU0_STRPU (Transcription elongation factor spt6 n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7PAU0_STRPU) HSP 1 Score: 175 bits (444), Expect = 1.250e-42 Identity = 142/480 (29.58%), Postives = 210/480 (43.75%), Query Frame = 1
Query: 16 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLV-----------PVRIM--------------------------------RHNDAG--------VRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNP---GTSAEVEKTLQKQKDDAPNRIPYLMCR-RGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLN 1290
+ LDL A+A+EL+RQG G R+ L I E+ Y+ D R P+ +E F LT ET T G +V P R M H D G V+VRL+ G + GF+ +++D + + + VK + A I+K+D RF++ L+ + SD +W P D ++YE A+ + + KD+ K A + R I+HP F+N T+ +AE+ ++E SD G+ +IRPSSKG DHL++TW +G + H D++E GK L LKIG EE+EDLDEII+R + V D+ + Y+ G+ +EK LQ +K PNRIPY MC + PG L Y P R V ++P+GY + F T+ L +WFK++
Sbjct: 1230 LKDLDLDAFAEELERQGYGNRSITLYDIRAELNSRYK--------------DLRTPFHPFTPEEAFSILTKETPETFYRGKMVTCKVTGIARRRPTREMLDDANPSKNDETGLWLCPFCQQDNFFELNEVWSHFDTGNCPGQAVGVKVRLDNG--IMGFIHTKFLSDSKV---------KNPEDRVKIGMTLHARIMKIDIERFQVDLTSKSSDLQDRNGEW--------------------APPRDTYYDYESAEMDKQ---KDEEVK-----------KKAAASSTYVKRVIVHPSFQNITYKQAEKVMRE-SDV-GDVIIRPSSKGADHLTVTWKVEDGVYQHIDVQEEGKDNDFSLGSTLKIGEEEFEDLDEIIARHIQPMAAFVRDVTSHKYYHAVEGGSKELMEKYLQTEKKKTPNRIPYFMCLCQNYPGKFLLSYQPRSKGRHEYVSITPDGYKFRGQTFTTINSLHRWFKVH 1648
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A3B4XSJ0_SERLL (Transcription elongation factor spt6 n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4XSJ0_SERLL) HSP 1 Score: 175 bits (443), Expect = 1.590e-42 Identity = 129/440 (29.32%), Postives = 198/440 (45.00%), Query Frame = 1
Query: 16 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAG--------VRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKY---NPGTSAEVEKTLQKQKDDAPNRIPYLMCR-RGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQ 1299
+ LDL A+A+EL+RQG G + L I E+ +C +D R+PY P +E+F LT ET T G + H D+G VR RL+ G + GF+P +++D V+ + VK + I+K+D +F + L+ R SD M ++W P + F E KQE + K Q I R I HP F N + +AE+ ++ + +G+ +IRPSSKG +HL++TW +G + H D++E GK+ L L I EE+EDLDEI +R + DLL + N G ++E+ L + K + P IPY + + +PG L Y P R V ++P+G+ + F T+ LF+WFK + Q+
Sbjct: 1061 LKDLDLDAFAEELERQGYGNKGITLYDIRAEL--------------SCRYKDLRVPYRVPNTEEVFNLLTKETPETFYIGNTHCTEVWNHFDSGSCPGQAIGVRSRLDNG--VQGFIPTKFLSDKVVKHP---------EERVKVGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTES----------------EDQKQEEEFKKKQQRTPYIKRV-------------------IAHPNFHNISFNQAEKMMETLD--QGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQDCNGGNKEKMEELLVRTKREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQE 1438 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7246.18378.1 >prot_Ecto-sp13_S_contig7246.18378.1 ID=prot_Ecto-sp13_S_contig7246.18378.1|Name=mRNA_Ecto-sp13_S_contig7246.18378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=588bp NINCQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGback to top mRNA from alignment at Ecto-sp13_S_contig7246:1667..7515- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7246.18378.1 ID=mRNA_Ecto-sp13_S_contig7246.18378.1|Name=mRNA_Ecto-sp13_S_contig7246.18378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5849bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7246:1667..7515- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7246:1667..7515- >mRNA_Ecto-sp13_S_contig7246.18378.1 ID=mRNA_Ecto-sp13_S_contig7246.18378.1|Name=mRNA_Ecto-sp13_S_contig7246.18378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1764bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7246:1667..7515- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |