prot_Ecto-sp13_S_contig7246.18378.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7246.18378.1
Unique Nameprot_Ecto-sp13_S_contig7246.18378.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length588
Homology
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: D8LQN5_ECTSI (Similar to putative chromatin structure regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN5_ECTSI)

HSP 1 Score: 481 bits (1239), Expect = 1.490e-165
Identity = 280/283 (98.94%), Postives = 280/283 (98.94%), Query Frame = 0
Query:  249 MHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPAAPAPAAGQPQYPAYSGGAYGYNSDQPSYGSQAGYAGAPVPARPGTRW 531
            MHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPAAPAPAAGQPQYPAYSGGAYGYNS QPSYGSQAGYAGAP PARPGTRW
Sbjct:    1 MHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RPAAPAPAAGQPQYPAYSGGAYGYNSGQPSYGSQAGYAGAPAPARPGTRW 282          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: D8LQN4_ECTSI (GTB1 RNA binding / hydrolase, acting on ester bonds, also similar to transcription elogantion facto n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN4_ECTSI)

HSP 1 Score: 372 bits (956), Expect = 7.460e-111
Identity = 187/205 (91.22%), Postives = 188/205 (91.71%), Query Frame = 0
Query:    1 NINCQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFN 205
            N+N  VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYR              DRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDK RFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFN
Sbjct: 1348 NLNDSVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYR--------------DRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKGRFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFN 1538          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A6H5L9M6_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M6_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 1.150e-93
Identity = 156/174 (89.66%), Postives = 158/174 (90.80%), Query Frame = 0
Query:    2 INCQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDK 175
            ++ QVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGN E         DRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQ     GVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDK
Sbjct:  349 LDVQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNDEMINQMVVHVDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQ-----GVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDK 517          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A836C842_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C842_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.000e-78
Identity = 177/505 (35.05%), Postives = 254/505 (50.30%), Query Frame = 0
Query:    2 INCQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEG-GPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQH----RKAINRAGRGGGASSAVQAGVR-YPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTD-------------IKELGKQP------------------GSMLAPRLK-------------------------IGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKS 444
            +  ++ +LDL  +A EL+RQG GKR  QL+++ +EIR+PYR              +RR P+    +D++FEW+TGE DATLR G++V   +  H   GVR  +EG    L GF+P D + DD LPPD      ADL  +   N +  A I  + K RFE++LSLR+SDT  +P  W            + W RP SLP +D +F++++ ++E  ER+ +      +  +    + GG   A   G R + RSI+HP F+N T  EAE  LK  ++  G+ +IRPSSK  D L++TWMW  GEF H +             I  L                        MLA R+                           GGEEYE LDEI++R ++  ND V ++LA  KY      EVE  + + K  AP+ IPYL  R G PGY  L Y+P  +VR  ++EV+ +G+ +  +  +T+PEL  WFK N   L    R+ + S
Sbjct:  510 LKDKLEELDLVEFAGELERQGLGKRRMQLEAVKDEIRFPYR--------------ERRRPFQRASDDDVFEWITGEDDATLRPGMVVTCSVSGHTRGGVRATVEGLSRALLGFIPMDKLQDDPLPPD------ADLALMFPRNSIRSAVIADIRKPRFEVQLSLRRSDTQQNPAAW-----------GTQWRRPMSLPPIDREFDHDKCQREWAERLAETQALLAQVRLQDVAQRGGTGGAPPKGSRIFQRSIVHPNFRNVTFQEAEAKLKAGAEV-GDVIIRPSSKSRDMLTITWMWQPGEFKHIEEEYESLDEIMARYIAPLNXXXXXXXXXXXXXXXXXXLGVAEMLAHRINPLTLIMNKTECSHFVAFHMCAGGPITGGEEYESLDEIMARYIAPLNDGVAEMLAHPKYKDLPRKEVEDLVMEMKRSAPSSIPYLFARHGSPGYFVLFYIPGKSVRSELIEVTDKGFKIRTKELRTVPELVNWFKKNFNNLPPMPRSQQCS 982          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A151ZDL6_9MYCE (Transcription elongation factor spt6 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZDL6_9MYCE)

HSP 1 Score: 182 bits (461), Expect = 7.680e-45
Identity = 128/437 (29.29%), Postives = 219/437 (50.11%), Query Frame = 0
Query:    6 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLM-CRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTS 441
            +++LD   ++D ++RQ      + L  I +E+  P+              QD R PY  P  D++F WLTGE+D T R+G LV V   R  D  ++VRLE G  L G +  + ++D          QK   +G       +   I+ +DK RF++ LS ++SD   D +KW+  L     F     N    L   DE    +  K++     +++                      R  R+++HP + +++ +EAE++LK+     GEA++RPSSKG DH+++T+ + +G  +H DIKE  K     L     +G  +Y+ LDEI++R V    + +N++ +   +  GT  E+++ ++++K + P RIPY     +  PG+V L ++P  T R   + +  +G+++ K+ F +L +L K+FK N  QL +S   S
Sbjct: 1039 LDRLDYDHFSDIIERQVGRPMKRTLAFIRKELTNPF--------------QDFRAPYQQPSNDQIFNWLTGESDHTFRKGTLVSVTTNRTFDNAIKVRLENG--LEGSISTNDISDQ-------NDQKTIPRGTT-----LNCRILSIDKDRFQVNLSCKQSDL--DVNKWEQQLS----FDIKMDNENRYLLTGDEVPRPQEVKKKPLPTKRER----------------------RIKRTVVHPLWHSYSCMEAEKYLKDKPV--GEALLRPSSKGFDHITVTFKFWDGIILHHDIKEADKPNAVSLGKSFFMGETKYDSLDEILARHVEYLINNLNEVKSHQYWKNGTQEEIDQLIRQEKINNPKRIPYYFGINQSHPGFVTLYHVPTSTPRHEHIFIKSDGFLLRKKLFHSLNDLIKYFKTNYAQLLQSRAPS 1417          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: F4QFF8_CAVFA (Transcription elongation factor spt6 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QFF8_CAVFA)

HSP 1 Score: 178 bits (451), Expect = 1.480e-43
Identity = 133/443 (30.02%), Postives = 211/443 (47.63%), Query Frame = 0
Query:    9 LDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKW------DAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAV-------QAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGV----PGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQL 434
            +DL A+AD L+ +   ++ + L  I  E+  P+               D R  Y  P  D++F WLTGETD T + G LV V  +R++  GVR RLE G  L   +P D ++D        TG   D K   +   L    +  VDK RF + LS + SD   D  KW      D  +     +       P +L  +                         + +G   G S A+       +   R  R+++HP +K+   +EAE++LK+     GEA++RPSS+G DH+++T+ + +G  +H DIKE  K     L     +G  +++ LDEI++R V    + +ND+     +  G+  E+++ ++K+K   P  IPY   R G+    PGY+ L ++P+++ R   + V PEG+ M K+ + +L EL K FK N  QL
Sbjct: 1007 IDLDAFADILESRNNTQKKKVLYMIKNELTSPFA--------------DIRNYYHPPTYDQIFTWLTGETDETFKSGTLVSVSTIRNSPEGVRCRLENG--LEAVIPSDCISD--------TG---DTKSFPRGTTL-SCRVKSVDKERFNVTLSCKPSDM--DISKWEDMIYHDLKMNGDNKYLNLDPTPPTALLTM------------------------TSLSGGNNGNSKALVERRPVPKKEARQKRNVVHPLWKSMNFMEAEKYLKDKPV--GEAILRPSSRGHDHITVTFKFWDGIILHHDIKEADKPNAVSLGKSFYMGETKFDSLDEILARHVEYLINNLNDVKTHRYWKSGSKDEIDEFMRKEKSKNPKHIPY---RFGIAIERPGYIVLYHVPSNSPRHEYILVKPEGFEMRKKMYASLDELIKHFKNNYAQL 1390          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A7S4ELD9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ELD9_9STRA)

HSP 1 Score: 178 bits (451), Expect = 1.580e-43
Identity = 133/434 (30.65%), Postives = 203/434 (46.77%), Query Frame = 0
Query:    6 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNY-------ERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTR-GEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGV-PGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLN 430
            V +LDL  +A  ++  G GK    ++ I  E R P+               D R P  T   D+LF  +TGETD +LR G  +  +I+ + D G +V+LEG   +  F+    + DD +            + VV    ++ A I  V K    + LSLR+ D +  P  WD               RP SL  LDE F+        E+  +E   R++    K  N+ G  G     V       R+  HP F+N    E EE LK       GEA+IRPSSK  D L++ WM+ +G+    ++ E  K   + +   LKI GE Y  +DE++ R ++  NDLV +L+   K+   +  ++++ L+K K    N IPY +C   + PGY +L ++ + T R+  + +SP G+V   + FK+L  L   FK N
Sbjct: 1435 VEELDLDTFAQMIEENGHGKWHSHMEMIKWEFRLPF--------------VDPRNPMDTLAGDKLFRLITGETDQSLRPGKEITGKILANTDFGSKVKLEGD--IPAFISLRNLADDHVEA---------AEDVVGVGTIVTAIITAVKKDHMSVDLSLRREDFIKQPSTWD---------------RPESLTPLDENFDEIACKTIEEKKSKEREARLEAMQIKLSNKVGEDGKRIGRVTR-----RACAHPAFRNAKGTELEEELKSGGPAMVGEALIRPSSKSVDSLAIHWMYSDGKIKIIEVNEEDKDTDASVGNVLKIKGESYGSIDELMGRYIAPMNDLVEELVNHRKFVDRSEDDLDEELRKGKAANKNSIPYNICWMEMHPGYSSLRFILSSTPRQHPIGISPNGFVWGAKTFKSLDILLNDFKKN 1823          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A8J4PXP9_9MYCE (Transcription elongation factor spt6 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PXP9_9MYCE)

HSP 1 Score: 177 bits (449), Expect = 2.720e-43
Identity = 124/443 (27.99%), Postives = 220/443 (49.66%), Query Frame = 0
Query:    6 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGV----PGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKS 444
            +++LD  A++D L++       + L  I  E+  P+               D R PY  P   ++F+WLTGETD TLR G L+    +R+ +  V+ RL+ G  L G +P D ++D+            D+K + +    +   +I VDK RF + LS ++SD    P +W+  +     +  +   + A L   D   +  + +Q  +++   + RK                      R+++HP + +FT LEAE +L++     GE ++RPSSKG DH+++T+ + +   +H DIKE  K     L     +G  +++ LDEI++R V    + +N++     +  GT +E+++ ++++K   P R+PY     G+    PG++ L ++P  T R   + +  +GYVM K+ F TL +L K+FK N  QL ++  +S  +
Sbjct: 1065 LDRLDFDAFSDILEKHNGHSVKKMLALIKRELTNPFA--------------DIRSPYRPPNFAQIFQWLTGETDQTLRPGTLISATTIRNFEHNVKCRLDNG--LEGTIPSDNISDN-----------NDVKSLPR-GLTLNCRVINVDKERFGVTLSCKESDL--SPKRWEEKI----FYDLTSNGQNAYLKLDDNPPSLAKLQQSEKKKPVKKERKV--------------------KRTVIHPLWHSFTCLEAENYLRDKQI--GEPILRPSSKGFDHITVTFKFWDDIILHHDIKEADKPNAVSLGKSFYMGDVKFDSLDEILARHVEYLINNLNEIRNHQYWKNGTKSEIDEMIKQEKLKNPKRLPYYF---GIDHQHPGFIILYHVPTSTPRHEPILIKSDGYVMRKQNFPTLNDLIKFFKQNYAQLLQNKPSSNST 1448          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A7M7PAU0_STRPU (Transcription elongation factor spt6 n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7PAU0_STRPU)

HSP 1 Score: 175 bits (444), Expect = 1.250e-42
Identity = 142/480 (29.58%), Postives = 210/480 (43.75%), Query Frame = 0
Query:    6 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLV-----------PVRIM--------------------------------RHNDAG--------VRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNP---GTSAEVEKTLQKQKDDAPNRIPYLMCR-RGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLN 430
            +  LDL A+A+EL+RQG G R+  L  I  E+   Y+              D R P+     +E F  LT ET  T   G +V           P R M                                 H D G        V+VRL+ G  + GF+   +++D  +          + +  VK    + A I+K+D  RF++ L+ + SD      +W                     P  D  ++YE A+ + +   KD+  K             A  +     R I+HP F+N T+ +AE+ ++E SD  G+ +IRPSSKG DHL++TW   +G + H D++E GK     L   LKIG EE+EDLDEII+R +      V D+ +   Y+    G+   +EK LQ +K   PNRIPY MC  +  PG   L Y P    R   V ++P+GY    + F T+  L +WFK++
Sbjct: 1230 LKDLDLDAFAEELERQGYGNRSITLYDIRAELNSRYK--------------DLRTPFHPFTPEEAFSILTKETPETFYRGKMVTCKVTGIARRRPTREMLDDANPSKNDETGLWLCPFCQQDNFFELNEVWSHFDTGNCPGQAVGVKVRLDNG--IMGFIHTKFLSDSKV---------KNPEDRVKIGMTLHARIMKIDIERFQVDLTSKSSDLQDRNGEW--------------------APPRDTYYDYESAEMDKQ---KDEEVK-----------KKAAASSTYVKRVIVHPSFQNITYKQAEKVMRE-SDV-GDVIIRPSSKGADHLTVTWKVEDGVYQHIDVQEEGKDNDFSLGSTLKIGEEEFEDLDEIIARHIQPMAAFVRDVTSHKYYHAVEGGSKELMEKYLQTEKKKTPNRIPYFMCLCQNYPGKFLLSYQPRSKGRHEYVSITPDGYKFRGQTFTTINSLHRWFKVH 1648          
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Match: A0A3B4XSJ0_SERLL (Transcription elongation factor spt6 n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4XSJ0_SERLL)

HSP 1 Score: 175 bits (443), Expect = 1.590e-42
Identity = 129/440 (29.32%), Postives = 198/440 (45.00%), Query Frame = 0
Query:    6 VNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNGVTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAG--------VRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKY---NPGTSAEVEKTLQKQKDDAPNRIPYLMCR-RGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQ 433
            +  LDL A+A+EL+RQG G +   L  I  E+              +C  +D R+PY  P  +E+F  LT ET  T   G      +  H D+G        VR RL+ G  + GF+P  +++D V+            +  VK    +   I+K+D  +F + L+ R SD M   ++W  P  +   F                    E  KQE   + K Q    I R                    I HP F N +  +AE+ ++ +   +G+ +IRPSSKG +HL++TW   +G + H D++E GK+    L   L I  EE+EDLDEI +R +        DLL    +   N G   ++E+ L + K + P  IPY +   + +PG   L Y P    R   V ++P+G+    + F T+  LF+WFK + Q+
Sbjct: 1061 LKDLDLDAFAEELERQGYGNKGITLYDIRAEL--------------SCRYKDLRVPYRVPNTEEVFNLLTKETPETFYIGNTHCTEVWNHFDSGSCPGQAIGVRSRLDNG--VQGFIPTKFLSDKVVKHP---------EERVKVGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTES----------------EDQKQEEEFKKKQQRTPYIKRV-------------------IAHPNFHNISFNQAEKMMETLD--QGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQDCNGGNKEKMEELLVRTKREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFRWFKDHYQE 1438          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7246.18378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQN5_ECTSI1.490e-16598.94Similar to putative chromatin structure regulator ... [more]
D8LQN4_ECTSI7.460e-11191.22GTB1 RNA binding / hydrolase, acting on ester bond... [more]
A0A6H5L9M6_9PHAE1.150e-9389.66S1 motif domain-containing protein n=1 Tax=Ectocar... [more]
A0A836C842_9STRA1.000e-7835.05S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A151ZDL6_9MYCE7.680e-4529.29Transcription elongation factor spt6 n=1 Tax=Tiegh... [more]
F4QFF8_CAVFA1.480e-4330.02Transcription elongation factor spt6 n=1 Tax=Caven... [more]
A0A7S4ELD9_9STRA1.580e-4330.65Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A8J4PXP9_9MYCE2.720e-4327.99Transcription elongation factor spt6 n=1 Tax=Polys... [more]
A0A7M7PAU0_STRPU1.250e-4229.58Transcription elongation factor spt6 n=3 Tax=Echin... [more]
A0A3B4XSJ0_SERLL1.590e-4229.32Transcription elongation factor spt6 n=1 Tax=Serio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 203..223
NoneNo IPR availableGENE3D2.40.50.140coord: 62..170
e-value: 3.6E-24
score: 86.7
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 83..165
e-value: 3.7E-4
score: 29.8
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 238..344
e-value: 1.5E-29
score: 103.9
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 345..444
e-value: 2.4E-9
score: 38.7
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 254..333
IPR035420Spt6, SH2 domainPFAMPF14633SH2_2coord: 243..429
e-value: 8.2E-55
score: 185.5
IPR017072Transcription elongation factor Spt6PANTHERPTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6coord: 6..432
IPR003029S1 domainPROSITEPS50126S1coord: 85..165
score: 11.899
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 80..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7246contigEcto-sp13_S_contig7246:1667..7515 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7246.18378.1mRNA_Ecto-sp13_S_contig7246.18378.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7246 1667..7515 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7246.18378.1 ID=prot_Ecto-sp13_S_contig7246.18378.1|Name=mRNA_Ecto-sp13_S_contig7246.18378.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=588bp
NINCQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNVESNG
VTCAIQDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGV
RVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAI
IKVDKARFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRL
DEKFNYERAKQEARERIKDQHRKAINRAGRGGGASSAVQAGVRYPRSIMH
PQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMH
TDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASD
KYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRK
IVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRKSSSRQAS
SSNGTSSSSSHNQNYQQPPLPPDNVPPPPPPRPAAPAPAAGQPQYPAYSG
GAYGYNSDQPSYGSQAGYAGAPVPARPGTRWGQTPATTPAAGSQDAAAAA
YQAQYAPQPQQPQQQQQQVRVRVVMMVGERITYSSLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR036860SH2_dom_sf
IPR035420Spt6_SH2
IPR017072TF_Spt6
IPR003029S1_domain
IPR012340NA-bd_OB-fold