mRNA_Ecto-sp13_S_contig7208.18331.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: D8LF18_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LF18_ECTSI) HSP 1 Score: 578 bits (1491), Expect = 1.780e-200 Identity = 301/311 (96.78%), Postives = 308/311 (99.04%), Query Frame = 1
Query: 70 MPQHEDSIARKPLQRFKRLTGSLETLISSIAQDWEDLATAPAADAVGLLDDDGPTVHGKMRKAQLLFTELHSTTRKMHSAIETIRNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDTLQTAEEHAGNLAILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHERSSELPGPLFTLYCQLEAYCDSVLAATGGMDESGAFSPLATFGGDGGDVGGDRHPPGLAASVTIEPAKACVSASAKAAAAGPKDA 1002
MP+HEDSIARKPLQRFKRLTGSLETLISS+AQDWEDLATAPAADAVGLL DDGP+VHGKMRKAQLLFTELHSTTRK+HSAIETIRNKVA+ KQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEE+EEQGFLEDVDTLQTAEEHAGNLAILK QKEQRINAQLALKATQIRVKAA+STVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHERSSELPGPLFTLYCQLEAYCDSVLAATGGMDESGAFSPLATFGGDGGDVGGDRHPPGLAASVTIEPAKACVSASAKAAAAGPKDA
Sbjct: 1 MPEHEDSIARKPLQRFKRLTGSLETLISSMAQDWEDLATAPAADAVGLLHDDGPSVHGKMRKAQLLFTELHSTTRKIHSAIETIRNKVATAKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEDEEQGFLEDVDTLQTAEEHAGNLAILKDQKEQRINAQLALKATQIRVKAASSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHERSSELPGPLFTLYCQLEAYCDSVLAATGGMDESGAFSPLATFGGDGGDVGGDRHPPGLAASVTIEPAKACVSASAKAAAAGPKDA 311
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: A0A835YW19_9STRA (Fms-interacting protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW19_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 2.610e-17 Identity = 67/184 (36.41%), Postives = 92/184 (50.00%), Query Frame = 1
Query: 331 VASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDTLQTAEEHAGNLA-----------------------ILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHERSSELPGPLFTLYCQLEAYCDS 813
V ++ +D HLQL+NLLYERD+L RE QLCRD +L+KM +E L +D +A+ HA + ILKG+ R L+ Q R +A ++V E + +L LP L +E A PL+ M RR R+++LP PLFTL+CQLEAY S
Sbjct: 55 VVERRRELDGVHLQLQNLLYERDHLLREIQLCRDHPTPQLDKMARDEGAPILPSMDDAVSADAHANHQEHPSAARSPHAHMHXXXXXAAHSQILKGELTARDKMTRQLRELQERARAQAASVAEQQRWLAGLPRALAALEDASKPLQAYMRSGKSERRALQHRAADLPKPLFTLFCQLEAYAFS 238
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: A0A0P1B7G5_PLAHL (Conserved coiled/coiled coil protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B7G5_PLAHL) HSP 1 Score: 83.2 bits (204), Expect = 9.820e-14 Identity = 55/163 (33.74%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 322 RNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDTLQT-AEEHAGNLAILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHE-RSSELPGPLFTLYCQLEAY 804
R +V K + + LQL+NLLYE+D+L RE Q CR F+ EL+K++ F++ +Q A+ H +L L + R Q LK + ++ N+ ++ + +LD LP +L +E A L++ M +R + +ELP PL+ LYC+LEAY
Sbjct: 66 RTRVQEQKNLAETHQLQLQNLLYEKDHLLREIQSCRGFSTKELDKID------FVDGPIPIQVDADVHRQHLNQLTQELNARKRLQAELKEIKAKIAVINNVIETKQTFLDELPHHLAGIEAATMGLQEYMGQNITVQRNEQQVAGTELPTPLYALYCELEAY 222
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: W2QE63_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora TaxID=4783 RepID=W2QE63_PHYPN) HSP 1 Score: 83.2 bits (204), Expect = 9.920e-14 Identity = 57/183 (31.15%), Postives = 97/183 (53.01%), Query Frame = 1
Query: 262 LLFTELHSTTRKMHSAIETIRNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDTLQTAEE-HAGNLAILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHERS-SELPGPLFTLYCQLEAY 804
LL + + S R ++ R +V K + + LQL+NLLYE+D+L RE + CR F+ E++K+E F + ++ + H +L L + R Q LK ++++ + + +L+ LP++L +E A L+K M ++R RH+ + +ELP PL+ LYC+LEAY
Sbjct: 48 LLLSAMKSGLRDTFLEADSRRTRVQEQKDVAEAHQLQLQNLLYEKDHLLREIRRCRGFSTKEMDKIE------FADGPLPIKVDPDVHRQHLDQLTQELHARKRLQTELKELKLKIAKVEDATETKQAFLNALPDHLAGIEAATTGLQKYMGEPVTAQRNRHQAAGTELPTPLYALYCELEAY 224
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: A0A5D6XH11_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XH11_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 8.130e-12 Identity = 63/241 (26.14%), Postives = 116/241 (48.13%), Query Frame = 1
Query: 85 DSIARKPLQRFKRLTGSLETLISSIA-QDWEDLATAPAADAVGLLDDDGPTVHGKMRKAQLLFTELHSTTRKMHSAIETIRNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDTLQTAEEHAGNLAILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHERSSELPGPLFTLYCQLEAY 804
+S A PL + KR + L++++ Q T D L + + +L + + R +A + +++VA K ++ + L+L+NLLYE+D+L RE + CR F+ E++K+E E + + + AE H +L L + E R LK + R++ ++ + + +LD L + +E A L+ M ++ R +++L PL+TL+C+LEAY
Sbjct: 8 ESAAAPPLAQLKRACAEIRELLATLVDQRVRAKETGRTLDKAAL--------RAQRWRLLVLLRGVKAGLRATFTAADDWKSRVARQKDVVEAHQLKLQNLLYEKDHLLREIRRCRGFSTKEMDKIEFEGGK-----LPIVGDAETHRQHLDQLTKELETRKRMITQLKDLKERIEKIDAATQAKQAFLDGLRHEVAAIENATTGLQLYMGAPVTAQLNRQHEANQLAAPLYTLFCELEAY 235
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: A0A8K1FD71_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FD71_PYTOL) HSP 1 Score: 76.3 bits (186), Expect = 1.870e-11 Identity = 62/211 (29.38%), Postives = 107/211 (50.71%), Query Frame = 1
Query: 208 GLLDDDGPTVH-GKMRKAQL---------LFTELHSTTRKMHSAIETIRNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDTLQTAEEHAGNLAILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRP--GSRRGRHERSSELPGPLFTLYCQLEAY 804
G+L D H G + KA+L L + + R+ A + + +V K ++ + L+L+NLLYE+D+L+RE + CR F E++K+E E + + AE H +L L + E R + LK + ++ + ++ + +LD L L +E + L+K M +P + + + + S+ LP PL+TLYC+LEAY
Sbjct: 24 GILADVDKQKHAGAVDKARLKQQRWQAVTLICAMKAGLRETFLASDAWKTRVQEQKDVVEAHQLKLQNLLYEKDHLAREIRRCRGFGTKEMDKIEFENGR-----LPIAVDAESHRQHLDQLTRELETRKRMKTQLKELKAKIDEVEAASQKKQTFLDGLRGELDTIEDSTRGLQKYM-HKPVTATLKSQQDASTLLPAPLYTLYCELEAY 228
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: A0A024TU27_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TU27_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 5.470e-11 Identity = 58/221 (26.24%), Postives = 110/221 (49.77%), Query Frame = 1
Query: 214 LDDDGPTVHGKMRKAQLLFTELHSTTRKMHSAIETIRNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDTLQTAEEHAGNLAILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHERSSELPGPLFTLYCQLEAYCDSVLAATG----GMDESGAFSPL 864
+DD+ + + +A L ++ +TR+ E R +VA K ++ +HL+L+NLLYE+D+L RE + C+ + EL++++ ++ G L + + ++H L ++ ++ Q LKA ++ A + V+ LD +P + PL+ + RH + LP PL++L+C+L+A+ S+ TG G + G+ S L
Sbjct: 29 MDDNATSTSNDVVRALCLLKDIKQSTRETFLDAEGYRRRVAEQKDLVEAHHLKLQNLLYEKDHLLREIRRCKGYPTKELDQIQFKD--GPLPVLVDADSHDKHLKRLDDELADRKAQLQHQQDLKA---QIAAVDEAVQAKHALLDTVPAHXXXXXXXXXPLQALLSIPISESTQRHRDAKVLPAPLYSLFCELDAFL-SIHPGTGTVAIGEAKVGSLSKL 243
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: A0A6U2L6P8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2L6P8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 5.490e-10 Identity = 64/227 (28.19%), Postives = 109/227 (48.02%), Query Frame = 1
Query: 196 ADAVGLLDD---DGPTVHGKMRKAQLLFTELHSTTRKMHSAIETIRNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQG---FLEDVDTLQTAEEHAGNLAIL-KGQKEQRINAQLALKATQI-----RVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMP---WRPGS-RRGRHERSSELPGPLFTLYCQLEAYCDSVLAAT 828
A + L+DD D + ++ + + S+ R + N++ K ++ + L +NL YE+ +L RE +LCR+ EL ++ E Q +LE + + +H + IL K E + +L + I R+K S+ R +L + L +ERA PL+K+ + G+ RR R+ ++++LPGPL+TL CQLEAY D + T
Sbjct: 17 ASLLSLVDDVVSDPMELESRLMSSYEALVTMKSSQRSAFLLLADKSNELKEHKSKLEASQLISQNLDYEKAHLKREIKLCREHDQNELEQLCRSEGQSVSSYLEKIGPVDAPMDHKSHQKILDKLSNEIEVRQRLEQELRSIIDESSRIKNETSS---KRAFLRNMSGQLSAIERATIPLQKHFSAENLKTGTARRERYTKANKLPGPLYTLCCQLEAYADMLNQTT 240
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: W7UBK5_9STRA (Tho complex subunit 5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBK5_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.500e-9 Identity = 66/221 (29.86%), Postives = 101/221 (45.70%), Query Frame = 1
Query: 208 GLLDDDGPTVHGK------MRKAQLLFTELHSTTRKMHSAIETIRNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDT-----LQTAEEHAGNLAILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDR-LPENLKDVERALAPLKKNMP----------WRPGSRRGRHERSSELPGPLFTLYCQLEAY 804
G L D V GK + +A + E S R+ A+ R ++ S K+ +D HLQL+NL+YE+D+L R Q RDF M EL K+EE+E L + L EEH +L L+ +K RI A Q + A + V E R L LP +++++ + + +P + P E+ LP P++ L +L+AY
Sbjct: 66 GTLGDQNSPVPGKDEMQELITEAAVTLIEYKSMARESAMAVGGCRTEMQSKKKEVDDRHLQLQNLMYEKDHLQRTIQSLRDFPMAELTKIEEDEGAPLLPGLTEGGQVRLLPVEEHRLSLERLQEEKGARIQLHEEHVAAQTKRAALSREVDELRAMLGTSLPRQIEELDALCTGIHERIPGLSIAAPFGGFPP-------EQVQALPRPMYVLLGRLQAY 279
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Match: A0A2D4BTQ1_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTQ1_PYTIN) HSP 1 Score: 67.0 bits (162), Expect = 1.940e-8 Identity = 51/163 (31.29%), Postives = 88/163 (53.99%), Query Frame = 1
Query: 322 RNKVASVKQTMDVNHLQLENLLYERDYLSRETQLCRDFTMTELNKMEEEEEQGFLEDVDTLQTAEEHAGNLAILKGQKEQRINAQLALKATQIRVKAANSTVKESRDYLDRLPENLKDVERALAPLKKNMPWRPGSRRGRHER--SSELPGPLFTLYCQLEAY 804
+ +V K ++ + L+L+NLLYE+D+L RE + CR F E++K+E E G +D + + H +L L + E R +K + +++ +T + + +LD L L ++ + L++ M RP S + +R S +LP PL+TL+C LEAY
Sbjct: 59 KTRVQEQKDAVEAHQLRLQNLLYEKDHLLREIRRCRGFHTKEMDKIEFE---GGAIPIDV--SPDVHRQHLDQLTKELETRKRMMADVKELRAKIEVVEATTQRKQAFLDGLRGELDRIDASTRGLQQYM-RRPVSATLKLQRDASLQLPTPLYTLFCXLEAY 215 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7208.18331.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7208.18331.1 >prot_Ecto-sp13_S_contig7208.18331.1 ID=prot_Ecto-sp13_S_contig7208.18331.1|Name=mRNA_Ecto-sp13_S_contig7208.18331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=355bp PHHCGSAQPKLICDISRVVSTPKMPQHEDSIARKPLQRFKRLTGSLETLIback to top mRNA from alignment at Ecto-sp13_S_contig7208:4348..7589+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7208.18331.1 ID=mRNA_Ecto-sp13_S_contig7208.18331.1|Name=mRNA_Ecto-sp13_S_contig7208.18331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3242bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7208:4348..7589+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7208:4348..7589+ >mRNA_Ecto-sp13_S_contig7208.18331.1 ID=mRNA_Ecto-sp13_S_contig7208.18331.1|Name=mRNA_Ecto-sp13_S_contig7208.18331.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1065bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7208:4348..7589+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |