prot_Ecto-sp13_S_contig12177.1832.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12177.1832.1
Unique Nameprot_Ecto-sp13_S_contig12177.1832.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length367
Homology
BLAST of mRNA_Ecto-sp13_S_contig12177.1832.1 vs. uniprot
Match: D7FT04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT04_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 5.760e-83
Identity = 138/145 (95.17%), Postives = 139/145 (95.86%), Query Frame = 0
Query:   19 MELMVLDRLLYRNRSQHRSSKYYTHVLEVRRACRAFAAPKLPDLLVEGLGLIARVPDSRNGRAREAWVRSAAGGLRRMRVAAVACGHSLETIVKASKFLAHQVSQTYFMALSTVFLASLARLFVCNLHLGGRLLLVHGALLRTFL 163
            MELMVLDRLLYRNRSQHRS+KYYTHVLEVRRAC AFAAPKLPDLL EGLGLIARVPDSRNGRAREAWVRSAA GLRRMRVAAVAC HSLETIVKASK LAHQVSQTYFMALSTVFLASLARLF CNLHLGGRLLLVHGALLRTFL
Sbjct:    1 MELMVLDRLLYRNRSQHRSAKYYTHVLEVRRACGAFAAPKLPDLLAEGLGLIARVPDSRNGRAREAWVRSAARGLRRMRVAAVACAHSLETIVKASKLLAHQVSQTYFMALSTVFLASLARLFACNLHLGGRLLLVHGALLRTFL 145          
BLAST of mRNA_Ecto-sp13_S_contig12177.1832.1 vs. uniprot
Match: A0A6H5L1C4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C4_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.290e-33
Identity = 107/164 (65.24%), Postives = 118/164 (71.95%), Query Frame = 0
Query:  205 MKNENNAA-SFSGNRGAENTSRQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDTGVHIGRVSSAEAEEINRADAASKEALNGAGSRRPAAGMVEGRDSGREGRTAAAATAGLAGGISAARRLGRGGVGGDDGGVSDHAGGDGDNASGVHGEKRLRKKV 367
            M+NE+NAA SFSGNRG E+T RQ                        XXXXXXXXX DDTGVHIG V+S EAEEINRADA SK+A  GAGSRRPAAG+ EGR+SGR GR AAAAT GLAGG++AARRLG GGVG DD     HAGG+GD+ASGVHG KR RKKV
Sbjct:    1 MQNESNAAASFSGNRGTESTGRQPSSSSSAPVATTGESPPGKQGSGGXXXXXXXXXSDDTGVHIGGVASVEAEEINRADAVSKKAFYGAGSRRPAAGVAEGRNSGRVGR-AAAATTGLAGGLNAARRLGGGGVG-DDXXXXGHAGGNGDSASGVHGAKRPRKKV 162          
BLAST of mRNA_Ecto-sp13_S_contig12177.1832.1 vs. uniprot
Match: A0A6H5KLL0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL0_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 2.390e-26
Identity = 59/68 (86.76%), Postives = 60/68 (88.24%), Query Frame = 0
Query:   96 MRVAAVACGHSLETIVKASKFLAHQVSQTYFMALSTVFLASLARLFVCNLHLGGRLLLVHGALLRTFL 163
            M VAAV C HSLE IVKASK LAHQVSQTYFMALST  LAS+ARLF CNLHLGGRLLLVHGALLRTFL
Sbjct:    1 MSVAAVECAHSLEAIVKASKLLAHQVSQTYFMALSTAILASVARLFACNLHLGGRLLLVHGALLRTFL 68          
BLAST of mRNA_Ecto-sp13_S_contig12177.1832.1 vs. uniprot
Match: W1NGL2_AMBTC (DUF4477 domain-containing protein n=3 Tax=Amborella trichopoda TaxID=13333 RepID=W1NGL2_AMBTC)

HSP 1 Score: 58.2 bits (139), Expect = 8.320e-6
Identity = 44/136 (32.35%), Postives = 72/136 (52.94%), Query Frame = 0
Query:   19 MELMVLDRLLYRNRSQHRSSKYYTHVLEVRRACRAFAAPKLPDLL------VEG------LGLIARVPDSRNGRAREAWVRSAAGGLRRMRVAAVACGHSLETIVKASKFLAHQVSQTYFMALSTVFLASLARLFV 142
            +E  + DRLLY+NR+QHR  +Y+  ++ VRR  + F +  L D++      V G      + L+ R+   RNG  R   ++    G+ R+          +E I+KA   ++  ++Q++FMAL+   LA LARL V
Sbjct:   23 IESDIFDRLLYKNRNQHRRCQYFQWLMRVRRDLKLFKSAGLEDIINSFFQAVNGKKPTLKVHLLERLKKKRNGSGRRENIQERLLGVGRL------LAQMVEPIIKAGIQISSLLAQSFFMALALTILAVLARLRV 152          
BLAST of mRNA_Ecto-sp13_S_contig12177.1832.1 vs. uniprot
Match: A0A072UYR7_MEDTR (DUF4477 domain-containing protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UYR7_MEDTR)

HSP 1 Score: 54.3 bits (129), Expect = 4.390e-5
Identity = 39/128 (30.47%), Postives = 66/128 (51.56%), Query Frame = 0
Query:   20 ELMVLDRLLYRNRSQHRSSKYYTHVLEVRRACRAFAAPKLPDLLVEGLGLIARVPDSRNGRAREAWVRSAAGG-----LRRMRVAAVACGHSLETIVKASKFLAHQVSQTYFMALSTVFLASLARLFV 142
            E  +L+RL+Y+N++QHR S Y+ H+L+VRR  R    P + +L+     +I      +     E+  R          L R+  +A      +E I+KA+  ++   ++++FM LS   +A LARL V
Sbjct:   22 ECGILERLVYKNKNQHRRSSYFQHLLKVRRDLRLLHLPNIEELVTSCFNVIKGDRPKQKVHLLESLKRRKCNDVKRTFLERLLGSARLLAEMVEPILKAATEISILFARSFFMGLSVTIMALLARLLV 149          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12177.1832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FT04_ECTSI5.760e-8395.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1C4_9PHAE1.290e-3365.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLL0_9PHAE2.390e-2686.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W1NGL2_AMBTC8.320e-632.35DUF4477 domain-containing protein n=3 Tax=Amborell... [more]
A0A072UYR7_MEDTR4.390e-530.47DUF4477 domain-containing protein n=1 Tax=Medicago... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34786FAMILY NOT NAMEDcoord: 20..141
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12177contigEcto-sp13_S_contig12177:350..4365 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12177.1832.1mRNA_Ecto-sp13_S_contig12177.1832.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12177 350..4365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12177.1832.1 ID=prot_Ecto-sp13_S_contig12177.1832.1|Name=mRNA_Ecto-sp13_S_contig12177.1832.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=367bp
MARKESSGDDRDGADTAAMELMVLDRLLYRNRSQHRSSKYYTHVLEVRRA
CRAFAAPKLPDLLVEGLGLIARVPDSRNGRAREAWVRSAAGGLRRMRVAA
VACGHSLETIVKASKFLAHQVSQTYFMALSTVFLASLARLFVCNLHLGGR
LLLVHGALLRTFLAQPCLSDSVSTAELAECDVPEDTGSFFSRLREAGGAH
KTSRMKNENNAASFSGNRGAENTSRQSSSSSSTPVATTGESSPGEQGSGG
GDADGSDDDSDDTGVHIGRVSSAEAEEINRADAASKEALNGAGSRRPAAG
MVEGRDSGREGRTAAAATAGLAGGISAARRLGRGGVGGDDGGVSDHAGGD
GDNASGVHGEKRLRKKV
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