prot_Ecto-sp13_S_contig12169.1829.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12169.1829.1
Unique Nameprot_Ecto-sp13_S_contig12169.1829.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length183
Homology
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: D8LKL6_ECTSI (Fe-S-cluster oxidoreductase-like n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKL6_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 3.690e-101
Identity = 159/185 (85.95%), Postives = 164/185 (88.65%), Query Frame = 0
Query:    1 MAAAASLNAVLLVSYYCSASQGLCLGANPAGWQRKQ-HSLPNQQGVRQHQ-QPHQLHHHQLNARNRRRAALPLAVTSDGSSGSNGERSRPETTAGFGSRASRRSKKGVINKNIDSKGGLATTAPPVVLLKRSSRWACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDKES 183
            MAAAASLNAVLLVS  CSA+QGLCLGANPAGWQRKQ HS PNQQGVR+HQ Q  +L HH L ARNRRRAALPLA  SDG SGSN +  RPETTAGFGSRASRRSKKG INKN DSKGGLAT AP VVLLKRSSRWACVKNCGACCYLAPDERPDLAEYLPDP+EFDLYMSMTG DGWCKHFDKES
Sbjct:    1 MAAAASLNAVLLVSCCCSAAQGLCLGANPAGWQRKQQHSWPNQQGVRRHQPQQRKLQHHPLYARNRRRAALPLAAASDGGSGSNSDSIRPETTAGFGSRASRRSKKGRINKNTDSKGGLAT-APAVVLLKRSSRWACVKNCGACCYLAPDERPDLAEYLPDPEEFDLYMSMTGSDGWCKHFDKES 184          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: A0A0P8D9G0_9CYAN (Putative Fe-S-cluster oxidoreductase n=5 Tax=Phormidium TaxID=1198 RepID=A0A0P8D9G0_9CYAN)

HSP 1 Score: 89.4 bits (220), Expect = 1.140e-19
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0
Query:  133 WACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDKES 183
            W CVK+CGACCYLAPDERPDL EYL  P+E  LY+S+ G DGWCKH+D ++
Sbjct:    4 WQCVKHCGACCYLAPDERPDLDEYL-SPEELKLYLSLVGDDGWCKHYDHDT 53          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: W7TMW6_9STRA (Uncharacterized protein family UPF0153 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMW6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.970e-18
Identity = 40/71 (56.34%), Postives = 47/71 (66.20%), Query Frame = 0
Query:  111 IDSKGGLATTAPPVVLLKRSSRWACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDK 181
            I +K    T+ P V  LK S +WACV NCGACCYLAP ERP L +Y  DP++   Y SM G DGWC H+DK
Sbjct:  125 IHNKSVTPTSTPAV--LKVSKKWACVANCGACCYLAPSERPYLLDYFDDPKDLAAYNSMVGDDGWCIHYDK 193          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: A0A8J7EIP6_9CYAN (YkgJ family cysteine cluster protein n=1 Tax=Nodosilinea sp. LEGE 06152 TaxID=2777966 RepID=A0A8J7EIP6_9CYAN)

HSP 1 Score: 85.9 bits (211), Expect = 2.030e-18
Identity = 34/49 (69.39%), Postives = 39/49 (79.59%), Query Frame = 0
Query:  133 WACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDK 181
            W CVK+CGACC+LAPDERPDL  YL DP +  LY+SM G DGWC H+DK
Sbjct:    4 WQCVKSCGACCFLAPDERPDLESYL-DPDQLALYISMVGADGWCVHYDK 51          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: A0A0F5Y754_9CYAN (Fe-S cluster protein n=1 Tax=Limnoraphis robusta CS-951 TaxID=1637645 RepID=A0A0F5Y754_9CYAN)

HSP 1 Score: 85.5 bits (210), Expect = 3.440e-18
Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 0
Query:  133 WACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDKES 183
            W CVKNCGACCYL P ERP+L EYL DPQ+ +LY+S+ G DGWC H+++E+
Sbjct:    4 WQCVKNCGACCYLEPSERPELDEYL-DPQQIELYLSLVGEDGWCIHYNQET 53          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: A0A139X7I9_9CYAN (Fe-S cluster protein n=3 Tax=Nostocales TaxID=1161 RepID=A0A139X7I9_9CYAN)

HSP 1 Score: 83.6 bits (205), Expect = 1.510e-17
Identity = 34/51 (66.67%), Postives = 40/51 (78.43%), Query Frame = 0
Query:  133 WACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDKES 183
            W CVK CGACCYL P ERPDL EYL  P+E +LY+SM G DGWC ++DKE+
Sbjct:    4 WQCVKQCGACCYLDPAERPDLDEYL-SPKELELYLSMVGDDGWCVNYDKEN 53          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: UPI001DDC23E0 (YkgJ family cysteine cluster protein n=1 Tax=Waterburya agarophytonicola TaxID=2886916 RepID=UPI001DDC23E0)

HSP 1 Score: 83.2 bits (204), Expect = 3.000e-17
Identity = 34/53 (64.15%), Postives = 41/53 (77.36%), Query Frame = 0
Query:  131 SRWACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDKES 183
            SRW CV NCGACC L P++RPDLAEYL  P+E  LYMSM G DGWC ++D ++
Sbjct:   14 SRWQCVNNCGACCNLTPEDRPDLAEYL-QPEELALYMSMVGEDGWCINYDHDN 65          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: UPI0005655269 (YkgJ family cysteine cluster protein n=1 Tax=Leptolyngbya sp. KIOST-1 TaxID=1229172 RepID=UPI0005655269)

HSP 1 Score: 82.8 bits (203), Expect = 3.170e-17
Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 0
Query:  133 WACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDK 181
            W CVK CGACC+LAPDERPDL  YL DP +  LY+SM G DGWC H++K
Sbjct:    4 WQCVKTCGACCFLAPDERPDLESYL-DPDQLALYLSMVGEDGWCIHYNK 51          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: UPI0016857F2F (YkgJ family cysteine cluster protein n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI0016857F2F)

HSP 1 Score: 82.8 bits (203), Expect = 3.340e-17
Identity = 33/52 (63.46%), Postives = 39/52 (75.00%), Query Frame = 0
Query:  132 RWACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDKES 183
            RW CVKNCGACCYL P ERP+L +YL DP+   LY+SM   DGWC HFD ++
Sbjct:    3 RWCCVKNCGACCYLDPSERPELDDYL-DPEALALYLSMVAEDGWCVHFDPQT 53          
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Match: UPI00135A027A (YkgJ family cysteine cluster protein n=1 Tax=Sodalinema gerasimenkoae TaxID=2862348 RepID=UPI00135A027A)

HSP 1 Score: 82.4 bits (202), Expect = 5.500e-17
Identity = 32/51 (62.75%), Postives = 40/51 (78.43%), Query Frame = 0
Query:  133 WACVKNCGACCYLAPDERPDLAEYLPDPQEFDLYMSMTGGDGWCKHFDKES 183
            W CVK+CGACCYLAP+ERPDL EYL   +E  LY+S+   DGWCKH+D ++
Sbjct:    4 WQCVKHCGACCYLAPEERPDLEEYL-SAEELQLYLSLVTDDGWCKHYDHDT 53          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12169.1829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKL6_ECTSI3.690e-10185.95Fe-S-cluster oxidoreductase-like n=2 Tax=Ectocarpu... [more]
A0A0P8D9G0_9CYAN1.140e-1968.63Putative Fe-S-cluster oxidoreductase n=5 Tax=Phorm... [more]
W7TMW6_9STRA1.970e-1856.34Uncharacterized protein family UPF0153 n=1 Tax=Nan... [more]
A0A8J7EIP6_9CYAN2.030e-1869.39YkgJ family cysteine cluster protein n=1 Tax=Nodos... [more]
A0A0F5Y754_9CYAN3.440e-1864.71Fe-S cluster protein n=1 Tax=Limnoraphis robusta C... [more]
A0A139X7I9_9CYAN1.510e-1766.67Fe-S cluster protein n=3 Tax=Nostocales TaxID=1161... [more]
UPI001DDC23E03.000e-1764.15YkgJ family cysteine cluster protein n=1 Tax=Water... [more]
UPI00056552693.170e-1767.35YkgJ family cysteine cluster protein n=1 Tax=Lepto... [more]
UPI0016857F2F3.340e-1763.46YkgJ family cysteine cluster protein n=1 Tax=Oscil... [more]
UPI00135A027A5.500e-1762.75YkgJ family cysteine cluster protein n=1 Tax=Sodal... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36791FAMILY NOT NAMEDcoord: 132..182
NoneNo IPR availablePANTHERPTHR36791:SF1coord: 132..182
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..183
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.588

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12169contigEcto-sp13_S_contig12169:2298..5156 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12169.1829.1mRNA_Ecto-sp13_S_contig12169.1829.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12169 2298..5156 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12169.1829.1 ID=prot_Ecto-sp13_S_contig12169.1829.1|Name=mRNA_Ecto-sp13_S_contig12169.1829.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=183bp
MAAAASLNAVLLVSYYCSASQGLCLGANPAGWQRKQHSLPNQQGVRQHQQ
PHQLHHHQLNARNRRRAALPLAVTSDGSSGSNGERSRPETTAGFGSRASR
RSKKGVINKNIDSKGGLATTAPPVVLLKRSSRWACVKNCGACCYLAPDER
PDLAEYLPDPQEFDLYMSMTGGDGWCKHFDKES
back to top