prot_Ecto-sp13_S_contig718.18294.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig718.18294.1
Unique Nameprot_Ecto-sp13_S_contig718.18294.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length540
Homology
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: D7FN53_ECTSI (PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN53_ECTSI)

HSP 1 Score: 708 bits (1828), Expect = 4.760e-246
Identity = 486/542 (89.67%), Postives = 493/542 (90.96%), Query Frame = 0
Query:    1 MLGPDATEQLAAATAKVFLEKRTNKREAAEMXXXXXXXXXXXXXXXXRVSDDGDGEDASLSAGKDVEAGDSWEKAGGRQDESKRKACAVEGDDEGGKGYGGKRTAGAGGGSVGEEVPVDGVVTRRGGLRSGSRGGGKDFPPENKTKGXXXXXXXXXXEDGVEVVEGEGPSTSQEIGE-KVEEAAQCDGTTGNAEEGEQAENGENDGETXXXXXXXXXXXXXXXXXXXXXXLEAGDEVDDRSKGRXXXXXXXKSGEGKASDGAEGXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--EERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLVSSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTTSALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHHIEK 539
            MLGPDATEQLAAATAKVFLEKR         XXXXXXXXXXXXXXXXRVSDDGDGEDASLSAGKDVEAGDS EKAG RQDESKRKACAVEGD+EG KG G KRTAGAGGGSVGEE PV+GVVTRRGGLRSGS GGGKDFPPE+KTK    XXXXXXX  GVEV EGE PS SQE GE KVEEAAQCDG TGNAEEG+QAEN ENDGETXXXXXXXXXXXXXXXXXXXX  LEAGDEVDD     XXX    K GEG+A DGAEG T  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  EERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFC LFGLYGDVMKVKLV+SRGMALVQMRYPVQAANAQRLLDQTPLSGMT+EVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDT SALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHHIEK
Sbjct:  382 MLGPDATEQLAAATAKVFLEKRXXXXXXXXXXXXXXXXXXXXXXXXXRVSDDGDGEDASLSAGKDVEAGDSSEKAGSRQDESKRKACAVEGDNEGEKGSG-KRTAGAGGGSVGEEAPVEGVVTRRGGLRSGSTGGGKDFPPEDKTKAEDVXXXXXXXXXGVEVAEGEDPSKSQETGEEKVEEAAQCDGPTGNAEEGKQAENVENDGETXXXXXXXXXXXXXXXXXXXXK-LEAGDEVDDXXXXXXXXEGGEKQGEGEAGDGAEGETKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKLVASRGMALVQMRYPVQAANAQRLLDQTPLSGMTIEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTASALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHHIEK 921          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: A0A6H5KZ42_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ42_9PHAE)

HSP 1 Score: 686 bits (1770), Expect = 2.640e-234
Identity = 457/550 (83.09%), Postives = 466/550 (84.73%), Query Frame = 0
Query:    1 MLGPDATEQLAAATAKVFLEKRTNKREAAEMXXXXXXXXXXXXXXXXRVSDDGDGEDASLSAGKDVEAGDSWEKAGGRQDESKRKACAVEGDDEGGKGYGGKRTAGAGGGSVGEEVPVDGVVTRRGGLRSGSRGGGKDFPPENKTKGXXXXXXXXXXEDGVEVVEGEGPSTSQEIGE-KVEEAAQCDGTTGNAEEGEQAENGENDGETXXXXXXXXXXXXXXXXXXXXXX--LEAGDEVDDRSKGRXXXXXXXKSGEGKASDGAEGXTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLVSSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHR--------FSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTTSALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHHIEK 539
            MLGPDATEQLAAATAKVFLEKR         XXXXXXXXXXXXXXXXRVSDDGDGE+ASLSA KDVEAGDS EKAG RQDESKRKAC VE DDEG KGY GKRTAGAGGGSVGEE  V+GVVTRRGGLRSGSRGGGKDFPPE+K KG           DGVEV EG+ PSTSQE GE KVE A QCDGTTGNAEEGEQ          XX           XXXXXXXXX  LEAGDEV+ RSKGR       K GE KASDGAEG T  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFC LFGLYGDVMKVK+V+SRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHR        FSTTPTP+DKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHG VSSVDLDTHAKAPLDT SA ASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSG+HHIEK
Sbjct:  598 MLGPDATEQLAAATAKVFLEKRXXXXXXXXXXXXXXXXXXXXXXXXXRVSDDGDGEEASLSAEKDVEAGDSLEKAGSRQDESKRKACTVEVDDEGEKGYSGKRTAGAGGGSVGEEALVEGVVTRRGGLRSGSRGGGKDFPPEDKAKGAGVALEEKAKADGVEVAEGKDPSTSQETGEEKVEGATQCDGTTGNAEEGEQXXXXXXXXXXXXEPEVEAGGEDKXXXXXXXXXXKLEAGDEVEGRSKGRCEVEAGEKQGERKASDGAEGETKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCHLFGLYGDVMKVKIVASRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRQSCWDRFAFSTTPTPDDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGPVSSVDLDTHAKAPLDTISARASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSFLSGKHHIEK 1147          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: A0A7S3UWL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWL0_HETAK)

HSP 1 Score: 116 bits (290), Expect = 4.080e-24
Identity = 79/211 (37.44%), Postives = 111/211 (52.61%), Query Frame = 0
Query:  308 WAAAGPVARSPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLVSSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTTSALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHN 518
            W+  G    SP+V+V++ D   V       LFGLYGDV+KVK+++ +  ALVQ  +P+QAANA   L+ TPL+G TL    S+ + I D +A+DFS V  +HR+     P D  Y+ +L PP P L V NV  + T E + +++ + GAVSSV              ALA  G +  E                 +   + AVHALIMTH+
Sbjct:  305 WSEGGG---SPLVLVQNADPAHVRGEHLAALFGLYGDVLKVKVMTHKACALVQYAHPLQAANAMAFLNDTPLAGQTLRCVRSTSFEIKDQSASDFSAVP-VHRYRGVERPLDPAYQRNLVPPGPRLAVANVG-EATEEALRALYGRFGAVSSV--------------ALAGDGTATVE-----------------MSDVQTAVHALIMTHH 479          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: A0A7S2WBW3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBW3_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.480e-18
Identity = 57/131 (43.51%), Postives = 74/131 (56.49%), Query Frame = 0
Query:  308 WAAAGPVARSP-----IVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLVSSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTL 433
            W  A P A +      ++ V +VDT   +      LFG+YGDV+KVK++SSR  AL+Q  YP  A  A++ LD  PL G  L +  SSQ  INDP+A D +    L RFS T +P D  Y+D L PP  TL
Sbjct:   56 WLEALPEANTEDGCTRVLHVTNVDTNYCTTDMLAILFGVYGDVIKVKILSSREAALIQFAYPAMAFFARQHLDGCPLLGRNLAIAYSSQVGINDPSAADLTSRPTLRRFSATTSPSDPMYQDHLVPPTNTL 186          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: I2CQY0_NANGC (Polypyrimidine tract binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQY0_NANGC)

HSP 1 Score: 90.1 bits (222), Expect = 4.170e-16
Identity = 70/223 (31.39%), Postives = 106/223 (47.53%), Query Frame = 0
Query:  308 WAAAGPVARSPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLVSSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTTSALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAERRLRVSF 530
            W+A  P   + +++V+ ++   V   A   LFGLYGDV +VK++  +  A+V+M  PVQA  A+ LLD +PL G  ++VK S+Q TI D  A DF+    LH +    +P    Y  +L  P   L + N+  D +  T  S+  +   V  V                     +   P+  +  ALV  ++       EAAVHA I+ HN  +  R L V+F
Sbjct:  123 WSARLPGTDTCVLIVQGLNMEMVGAEALAALFGLYGDVRRVKMMPEQDSAIVEMERPVQAYVAKWLLDASPLGGRVIKVKSSTQDTIRDVQAQDFTAFP-LHGYRQYASPRHPSYLANLVEPTAVLRIANIDWDTSEITFRSLLTQQEGVMGV---------------------TRLLPSSHTSPALVSFQS------VEAAVHACILLHNQEVDGRLLYVTF 317          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: A0A7S3UV41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV41_HETAK)

HSP 1 Score: 84.0 bits (206), Expect = 3.440e-14
Identity = 46/114 (40.35%), Postives = 67/114 (58.77%), Query Frame = 0
Query:  308 WAAAGPVARSPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLVSSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFSGVQGLHRFSTTPTPEDKR 421
            W+  G    SP+V+V++ D   V       LFGLYGDV+KVK+++ +  ALVQ  +P+QAANA   L+ TPL+G TL    S+ + I D +A+DF   +GL      P+ +  R
Sbjct:  158 WSEGGG---SPLVLVQNADPAHVRGEHLAALFGLYGDVLKVKVMTHKACALVQYAHPLQAANAMAFLNDTPLAGQTLRCVRSTSFEIKDQSASDFRWPRGLPLSPPPPSGQPSR 268          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: T1ESN3_HELRO (RRM domain-containing protein n=1 Tax=Helobdella robusta TaxID=6412 RepID=T1ESN3_HELRO)

HSP 1 Score: 80.5 bits (197), Expect = 1.610e-12
Identity = 52/147 (35.37%), Postives = 80/147 (54.42%), Query Frame = 0
Query:  319 IVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLV-SSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTATDFS-------GVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAV 457
            +V+V ++D  +V+P A   LFG+YGDV+KVK++ + +  AL+Q   P+QA  A   LD+  L G  ++V PS    +  P    F            LHRF     P  K Y +++ PP  TL + N+ P  + ET+ ++F+KHG V
Sbjct:  168 VVLVSNLDEEKVNPDALFTLFGVYGDVIKVKIMFNKKDTALIQFNDPMQAQTAMLNLDKLKLWGKVIKVTPSKHTIVQMPKDGQFDINLTKDYTNSTLHRFK---KPNSKNY-NNIFPPAATLHLSNI-PSTSKETLVALFSKHGTV 309          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: A0A085NRF5_9BILA (Uncharacterized protein n=2 Tax=Trichuris suis TaxID=68888 RepID=A0A085NRF5_9BILA)

HSP 1 Score: 79.7 bits (195), Expect = 8.490e-12
Identity = 71/228 (31.14%), Postives = 106/228 (46.49%), Query Frame = 0
Query:  313 PVARSPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLV-SSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPT--------ATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTTSALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAER-RLRVSF 530
            P+A SP+++V +++  +V+P A   LFG+YGDV +VK++ + +  ALVQ   P QA  AQ  LD+  L   T+ V  S   T+  P           D+S +  LHRF     P  K Y + + PP  +L + N+    T E I + F  +G V    + +    P D                        H  A  ++ +TE  + AL+  HNL L+E   LRVSF
Sbjct: 1711 PIAVSPVLLVSNLNEDKVTPDALFTLFGVYGDVQRVKILFNKKNSALVQYSEPTQAQLAQHHLDKVTLWSRTIRVSYSKHLTVQLPKEGQPDAGLTKDYS-LSLLHRFK---KPGSKNYLN-IYPPSASLHLSNIPTSTTEEFIVNAFVANGFV----VKSFKFFPKD------------------------HKMAIIQLESTEQGIEALVAMHNLQLSENAHLRVSF 1905          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: A0A0N4VR91_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4VR91_ENTVE)

HSP 1 Score: 75.1 bits (183), Expect = 2.660e-11
Identity = 68/221 (30.77%), Postives = 99/221 (44.80%), Query Frame = 0
Query:  317 SPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLV-SSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPT-----ATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHGAVSSVDLDTHAKAPLDTTSALASTGGSNAEPTKPSVQALVHMEADGKVRATEAAVHALIMTHNLTLAER-RLRVSF 530
            SP+V+V ++D   V+P A   LFG+YGDV +VK++ + +  AL+Q   P QA  A + LD+       + V  S    +  P        D+S    LHRF     P  K Y + + PP  TL + N+ P++T E +T+ F +HG                             +P         H  A  ++   E A++ALI  HN  LAE   LRVSF
Sbjct:   89 SPVVLVSNLDENRVTPDALFTLFGVYGDVQRVKILFNKKDNALIQYAEPQQAQFAIQHLDKVRWHDKQMRVAASKHTNVQMPKEDAGLTRDYS-QSPLHRFK---KPGSKNYMN-IYPPSATLHLSNIPPNITEEYLTNAFEQHGF----------------------------QPKGFKFFPKDHKMALLQLNDVETAINALIEMHNFKLAENAHLRVSF 276          
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Match: A0A1X7UYZ1_AMPQE (Uncharacterized protein n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7UYZ1_AMPQE)

HSP 1 Score: 76.3 bits (186), Expect = 4.660e-11
Identity = 55/155 (35.48%), Postives = 79/155 (50.97%), Query Frame = 0
Query:  309 AAAGPVARSPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKLV-SSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTI-------NDPTATDFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSIFAKHG 455
            A AG VA +P+V+  +++   +SP A   LFG+YGDVM+VK++ S R  ALVQ R   QA NA   L+   L G  L +  S    +       N+   T+      LHRF     P  K Y++ + PP PTL + N+   +T E +  +F   G
Sbjct:  273 AGAGVVAPTPVVLASNLNDKMISPHALFILFGVYGDVMRVKILYSKRDSALVQFREAQQAQNAVTHLNGCMLYGKKLHLTLSKHTQVQMPQPGSNEDALTEDFTNSPLHRFK---KPGSKNYQN-IYPPSPTLHLSNIPDGITEEYLRGLFTSTG 423          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig718.18294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FN53_ECTSI4.760e-24689.67PTB (HnRNP) homolog family member (Ptb-1) n=1 Tax=... [more]
A0A6H5KZ42_9PHAE2.640e-23483.09RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3UWL0_HETAK4.080e-2437.44Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2WBW3_9STRA1.480e-1843.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
I2CQY0_NANGC4.170e-1631.39Polypyrimidine tract binding protein n=1 Tax=Nanno... [more]
A0A7S3UV41_HETAK3.440e-1440.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
T1ESN3_HELRO1.610e-1235.37RRM domain-containing protein n=1 Tax=Helobdella r... [more]
A0A085NRF5_9BILA8.490e-1231.14Uncharacterized protein n=2 Tax=Trichuris suis Tax... [more]
A0A0N4VR91_ENTVE2.660e-1130.77Uncharacterized protein n=1 Tax=Enterobius vermicu... [more]
A0A1X7UYZ1_AMPQE4.660e-1135.48Uncharacterized protein n=2 Tax=Amphimedon queensl... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 432..529
e-value: 0.097
score: 15.6
coord: 319..387
e-value: 9.4E-6
score: 35.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 318..391
score: 10.275
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 314..404
e-value: 2.4E-12
score: 48.9
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 421..532
e-value: 9.0E-11
score: 43.6
NoneNo IPR availablePFAMPF13893RRM_5coord: 306..396
e-value: 7.0E-12
score: 45.0
NoneNo IPR availablePANTHERPTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDcoord: 315..530
NoneNo IPR availablePANTHERPTHR15592:SF27HEPHAESTUS, ISOFORM Ycoord: 315..530
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 330..465

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig718contigEcto-sp13_S_contig718:378..3362 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig718.18294.1mRNA_Ecto-sp13_S_contig718.18294.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig718 57..4165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig718.18294.1 ID=prot_Ecto-sp13_S_contig718.18294.1|Name=mRNA_Ecto-sp13_S_contig718.18294.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=540bp
MLGPDATEQLAAATAKVFLEKRTNKREAAEMLGPDATDQLAAATAKVRVS
DDGDGEDASLSAGKDVEAGDSWEKAGGRQDESKRKACAVEGDDEGGKGYG
GKRTAGAGGGSVGEEVPVDGVVTRRGGLRSGSRGGGKDFPPENKTKGEDV
APEEKTKEDGVEVVEGEGPSTSQEIGEKVEEAAQCDGTTGNAEEGEQAEN
GENDGETESEPEIEAGGEDKEKEEEEEEKLEAGDEVDDRSKGRDEAEDDE
KSGEGKASDGAEGETKVKVETEDEADAEADAEGDGNHDDDDDEAAGDGEE
ERVDVGAWAAAGPVARSPIVMVRHVDTLEVSPGAFCQLFGLYGDVMKVKL
VSSRGMALVQMRYPVQAANAQRLLDQTPLSGMTLEVKPSSQWTINDPTAT
DFSGVQGLHRFSTTPTPEDKRYRDSLSPPCPTLVVDNVSPDVTAETITSI
FAKHGAVSSVDLDTHAKAPLDTTSALASTGGSNAEPTKPSVQALVHMEAD
GKVRATEAAVHALIMTHNLTLAERRLRVSFLSGEHHIEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf