prot_Ecto-sp13_S_contig7176.18289.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig7176.18289.1
Unique Nameprot_Ecto-sp13_S_contig7176.18289.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length210
Homology
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: D7FYN9_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYN9_ECTSI)

HSP 1 Score: 389 bits (998), Expect = 3.320e-136
Identity = 203/209 (97.13%), Postives = 205/209 (98.09%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLWWMWSRRVAS 209
            MTSIVELFPKARRLSFDLRTLLQYVERGHAS DDAGMNLEEFGRQLD+LESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVS+RRQAVDRLLVLGGIIVT  FLWWMW RRVAS
Sbjct:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASPDDAGMNLEEFGRQLDVLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSDRRQAVDRLLVLGGIIVTSVFLWWMWGRRVAS 209          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: A0A835ZDP4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP4_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.600e-87
Identity = 133/206 (64.56%), Postives = 176/206 (85.44%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLWWMWSRR 206
            MTSIVELFPKARRL++DL+T +Q++E+GHASADD G++L+E  +QL +L+SL  QERP QRE+WRRKL+EL  +  FLR+QL R++  R++ G+EA+ERE LLARR+AALPS V+DAYAEEGSSLLRS+RM+GDYLQ+GQA+L SLV+QR RLK   R+VLD+AN++G+S SILR+SERR+AVDRLLVLGG++     L++ W+R+
Sbjct:    1 MTSIVELFPKARRLAYDLQTQIQFLEKGHASADDVGVSLDELEQQLKILDSLASQERPAQRENWRRKLKELVGDKDFLREQLDRYNNSRQRQGREAREREALLARRNAALPSGVVDAYAEEGSSLLRSQRMMGDYLQSGQAALASLVDQRHRLKGVQRRVLDIANVMGVSGSILRMSERREAVDRLLVLGGMVFITGLLYYAWARK 206          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: A0A7S2XZE9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZE9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.760e-55
Identity = 104/211 (49.29%), Postives = 142/211 (67.30%), Query Frame = 0
Query:    2 TSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLW---WMWSRRVAS 209
            TS+VEL PKAR+L F+L+T    VE G A+A+D    L E  +QL++LESLV  ERP QRE WR+KL EL+ +  FLR  L R         +E +ER+ELL RR  A+PSSV++ Y EEG++L RS+ MV D   TGQA + +L++QRS LK+A RK+LD+AN+LGLS  ++R + RR A D+ +V GG+I+T  FL+   W  +R   S
Sbjct:    4 TSVVELVPKARKLLFELQTQQTLVETGKANAEDVYFGLSELSQQLNILESLVNNERPAQRESWRKKLTELQRDVDFLRASLDRHVAKSSSGLREQQERQELLLRRTQAMPSSVVENYMEEGAALTRSQAMVEDLTYTGQAIMANLLDQRSTLKSAQRKILDLANLLGLSGVLMRSANRRDATDKWIVFGGMIITLGFLYFCYWYSTRSTTS 214          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: W7U6N0_9STRA (Golgi snap receptor complex member 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6N0_9STRA)

HSP 1 Score: 183 bits (464), Expect = 5.900e-55
Identity = 101/209 (48.33%), Postives = 141/209 (67.46%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAA-----LPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLWWMWS 204
            MTS+ EL PK ++L+F+L+  ++ VE G+ S D+  M L E  RQ+ +L +LV QERP  RE W+R++ EL +E  FLR  L RF Q R KV QEAKEREELLARR+        P+  ++   EEG+S  RS  M+ D L +GQA+L++L++QRS LK+A +KVLD+ N+LG+S+ I  ++ERR  VD+L+V GG+ VT   LW  W 
Sbjct:    1 MTSVAELLPKTKKLAFELQGQVRQVEIGYVSPDNVFMGLGELERQISILHTLVAQERPGAREQWQRRIGELHSEAVFLRTVLNRFLQSRGKVAQEAKEREELLARRYGKGGDLEAPARAVEELLEEGASYQRSSAMMNDILMSGQATLSNLLDQRSSLKSARKKVLDVLNLLGVSHRITGMAERRDTVDKLIVAGGMAVTLLVLWLCWK 209          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: B8BUE6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUE6_THAPS)

HSP 1 Score: 155 bits (391), Expect = 5.520e-44
Identity = 91/207 (43.96%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAAL----PSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLWWMW 203
            MTSIVELFPK+R+L++D R  L  V+ G     +  ++L+E  RQLDL+E+L  +E P QRE W+RK+ ELR +   +R+Q   +D+      ++ KER+ELLARR         +  M   +EE  SL  S  M+ D L +GQASL++LV QR R++  +RK+LD+ N +GLSNS +R+ ERR A D  LV GG+IVT   +++++
Sbjct:    1 MTSIVELFPKSRKLAYDSRQQLSQVQNGLICPSELFLSLDELSRQLDLMENLTNKETPAQREIWKRKILELREDAQSIRNQGNHYDRMVSAGIRQRKERDELLARRRRNRGNGGDADEMQQLSEEADSLATSHGMMNDLLSSGQASLSNLVGQRQRMRWVNRKMLDIGNKIGLSNSTMRMIERRDATDAWLVFGGMIVTLLVIYFLY 207          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: A0A6U0P085_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0P085_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.800e-40
Identity = 84/212 (39.62%), Postives = 129/212 (60.85%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAAL-------PSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLWWMWSR 205
            MTS+ ELFPK+R+L++D R  L  V+     A +   +L+E  RQL++++SLV Q+ P QR+ W+RK+ ELR +   +R Q   +D+      +E KEREEL+  RH            + M+ + EE  SL  S+ MVGD L +GQ+ L SL++QR+R++   R VLDM + +GLSN+ +R+ ERR   D   V GG+ +T   ++++W R
Sbjct:    1 MTSVNELFPKSRKLAYDARQQLCQVQNKSLHASELFFSLDELSRQLNIMDSLVSQQTPAQRQVWKRKILELREDANSIRRQGQYYDRMVSANVREQKEREELMTLRHRRGGRGRGDDAENAMNDFTEESESLAMSQNMVGDLLVSGQSQLNSLMDQRNRMRGVKRLVLDMGSKVGLSNATMRMIERRDTTDAYFVFGGMFLTILIIYFVWFR 212          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: A0A7S3PUS9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUS9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.590e-40
Identity = 87/211 (41.23%), Postives = 130/211 (61.61%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDA------YAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLWWMWSR 205
            MTSIVELFPK+R+L++D R  L  V+    SA +  ++L+E  RQL ++E L+ +E P QRE WRRK+ EL+ + + +R Q   + +      +  +EREELL R          D+       AEE +SL  S+ MVG+ L +GQA L SL++QR R++ A R VL++ N +GLSNS +R+ ERR   D  LVL G+++T   ++++W R
Sbjct:    2 MTSIVELFPKSRKLAYDARQQLSQVQNNLLSATELYISLDELQRQLSIIEQLLSRETPAQREIWRRKILELQEDASSIRRQGEYYHRMVNSNLRVQREREELLTRXXXXKKDGFGDSELGIQDLAEESTSLASSQNMVGELLMSGQAQLNSLIDQRRRMRGAKRMVLNIGNTIGLSNSTMRMIERRDENDVKLVLAGMVLTLLVIYFVWIR 212          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: A0A7S2CFP0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CFP0_9STRA)

HSP 1 Score: 144 bits (364), Expect = 6.980e-40
Identity = 85/207 (41.06%), Postives = 122/207 (58.94%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGI--IVTCAFLWWMWSR 205
            MTS+VELFP+ R+LS+DL+  L+ VE    +  D  + LEE  RQ   LE LV QE   ++++W+ K+R++     +L  QL  +     +   E  ER+ELL R  ++LP+SV+ AY EEG SL RS  +V + L     ++  L++QR  LK   RKVLDM   LG+S S +R+ ERR  VD  +V GG+  +  C +L W W R
Sbjct:    6 MTSVVELFPRTRKLSYDLQQQLREVEAKRMAPSDMELGLEELKRQTQTLEMLVEQE-VNRKDEWKAKIRDVCMTRDWLDSQLRHWRTQHDRAAVEEAERQELLGRVRSSLPTSVIGAYDEEGRSLSRSNNVVANLLDGAGEAMAELMDQREMLKGTQRKVLDMLTTLGVSKSTIRIIERRNVVDNAIVWGGMGFVTLCLYLLWRWVR 211          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: B5Y455_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y455_PHATC)

HSP 1 Score: 143 bits (361), Expect = 1.660e-39
Identity = 90/207 (43.48%), Postives = 123/207 (59.42%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQ----LGRFDQGRRKVGQEAKEREELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLWWMW 203
            MTSI ELFPK R+L++D R  +  V++G  SA D  + LEE  RQL+ +E LV +E P QR+ W RK+ ELR+E   L  Q         + R   GQE   R+ELL RR      S +   ++E SSL +S+ MV   +  GQASL  L+EQR RL+  +R V D+ N LGLS S +++ ERR   D  LV GG+IVT   ++++W
Sbjct:    1 MTSIGELFPKCRKLAYDARQQVAQVQQGVVSATDLYVLLEELSRQLNAMEELVYRETPVQRDVWNRKIAELRHECTLLHQQGTQAAHSASRYRNPYGQE---RDELLRRRRRRGNESDVQDLSQESSSLEQSQNMVFGLIDQGQASLNGLIEQRQRLRGVNRMVFDIGNRLGLSQSTMKIIERRDITDAYLVAGGMIVTILVIYFVW 204          
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Match: A0A7S2XN21_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XN21_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.620e-39
Identity = 87/210 (41.43%), Postives = 130/210 (61.90%), Query Frame = 0
Query:    1 MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLESLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVG---QEAKEREELLARRH----AALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQRSRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLWWMW 203
            M SIVELFPK R+L++D R  L  V+ G     +  M LEE  R LD++E+L+ +E P+QRE WRRK+ ELR++   +R Q   +D   R VG   ++ +ER+ LL+RR     A      ++  A+E  S+  S+ M+GD L +GQASLT L+EQR R+K   R +LD+ + +GLSNS +R+ ERR   D   V GG++V    +++++
Sbjct:    1 MASIVELFPKNRKLAYDARQQLAQVQNGLLPPSELFMLLEEISRSLDIMENLLSRETPSQREVWRRKILELRDDANSVRRQAEHYD---RMVGANVRQQRERDALLSRRRRTRRATGEEGEINDLADEYQSMESSQIMMGDLLASGQASLTGLIEQRQRMKGVKRVMLDIGSKIGLSNSTMRIIERRDVTDAYFVFGGMVVCLLLMYFLY 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7176.18289.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYN9_ECTSI3.320e-13697.13Soluble NSF Attachment Protein (SNAP) Receptor (SN... [more]
A0A835ZDP4_9STRA1.600e-8764.56Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2XZE9_9STRA1.760e-5549.29Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W7U6N0_9STRA5.900e-5548.33Golgi snap receptor complex member 2 n=2 Tax=Monod... [more]
B8BUE6_THAPS5.520e-4443.96Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A6U0P085_9STRA1.800e-4039.62Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S3PUS9_9STRA3.590e-4041.23Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2CFP0_9STRA6.980e-4041.06Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
B5Y455_PHATC1.660e-3943.48Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2XN21_9STRA3.620e-3941.43Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 119..180
e-value: 9.1E-14
score: 51.5
NoneNo IPR availableGENE3D1.20.5.110coord: 113..185
e-value: 3.6E-8
score: 35.5
NoneNo IPR availablePANTHERPTHR21230:SF1GOLGI SNAP RECEPTOR COMPLEX MEMBER 2coord: 6..203
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 6..203
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 204..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..203
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 122..175
NoneNo IPR availableTMHMMTMhelixcoord: 186..203
IPR027027GOSR2/Membrin/Bos1PIRSFPIRSF028865Membrin-2coord: 4..205
e-value: 1.6E-40
score: 137.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7176contigEcto-sp13_S_contig7176:1354..5240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7176.18289.1mRNA_Ecto-sp13_S_contig7176.18289.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig7176 978..5356 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig7176.18289.1 ID=prot_Ecto-sp13_S_contig7176.18289.1|Name=mRNA_Ecto-sp13_S_contig7176.18289.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=210bp
MTSIVELFPKARRLSFDLRTLLQYVERGHASADDAGMNLEEFGRQLDLLE
SLVGQERPTQREDWRRKLRELRNEHAFLRDQLGRFDQGRRKVGQEAKERE
ELLARRHAALPSSVMDAYAEEGSSLLRSRRMVGDYLQTGQASLTSLVEQR
SRLKNAHRKVLDMANILGLSNSILRVSERRQAVDRLLVLGGIIVTCAFLW
WMWSRRVAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027027GOSR2/Membrin/Bos1