mRNA_Ecto-sp13_S_contig7173.18286.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: D7G1F5_ECTSI (Amino acid/polyamine transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F5_ECTSI) HSP 1 Score: 707 bits (1825), Expect = 3.430e-250 Identity = 382/421 (90.74%), Postives = 392/421 (93.11%), Query Frame = 1
Query: 1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEG 1263
QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSM VAI +YMSIAWGAYATFGVGVDGDLLKTYPRTGLLT ARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDM+EAYSSLATDDGAG +K TAEDSISPSLRRHRNASGPPEAPLSSTGSVVAD +T+ASPNSLG R+GG S +S+PGQRGKRRLLGGGE IGG TSAAQGGVGGD NTRFESQEGG DARRGTAEVE RFLGVEDREQRGELLSE A XXXXXXX EE G+GRGGGEHVGWRQHHLQ DAADIESAGRGR FPRTVCSAGQAA EGEG AFWTSP+G RHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEG
Sbjct: 322 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMAVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTAARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGGEDARRGTAEVETRFLGVEDREQRGELLSEGA----AXXXXXXXDEEAGVGRGGGEHVGWRQHHLQGDAADIESAGRGRTFPRTVCSAGQAAVEGEGETAFWTSPEGLRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEG 738
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A7S2BAD5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BAD5_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.480e-27 Identity = 111/413 (26.88%), Postives = 147/413 (35.59%), Query Frame = 1
Query: 1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFI 1239
+ L +F+F FTC QN+F I NE+ PTP RV++VI ++ +A+T+Y+ +A Y TFG V+ D+L Y G+ TTAR V++LV YPLQ HPSR+CI S +V RLL + SA++ EG+A W HI +TA FLA SY IA+ V DLGVIL +VGATGST V++VLPGL Y +L PEPH KR+LA +Q +G +IIP+ALTFI
Sbjct: 56 RVLTVFIFGFTCQQNVFAITNELKDPTPPRVNSVILRAVGLALTVYILVAVAGYGTFGDSVESDILTNYGTGGITTTARFFVALLVCFSYPLQCHPSRMCITS--------------------------------------------------------IV-------------------------------RLL--------VPSASE----------------------------------------------------------------------------------------------------------------EGQARIW-------HIGITAVFLAASYLIALVVTDLGVILAIVGATGSTMVSYVLPGLCYFRLFPEPHIKRNLALVQFGLGCVIIPLALTFI 254
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A8J5XBN8_DIALT (Aa_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBN8_DIALT) HSP 1 Score: 120 bits (300), Expect = 8.210e-26 Identity = 131/419 (31.26%), Postives = 184/419 (43.91%), Query Frame = 1
Query: 1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTG-LLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHS 1254
+ L IFVF FTC QN+F++ NE+ +PT AR+D V+ S+L+A+ +Y+ + G Y T+G V D+L +YP +T AR ++++V YPLQAHPSR C L+ + S G G+ A ++ +A P A L VAD++T+A+ +G G+ + R + R E G ARR L + EQR + + XXXXXXXXXX + + S G FP + G + TAAFLA S IA+AV+DLGV++ VVGATGST V+++LPG +Y LHP PH R A A G+ I PV+L I H
Sbjct: 211 RVLSIFVFGFTCQQNVFSVVNELRKPTLARIDLVVGASVLLALALYLPVGVGGYLTYGSHVAPDVLLSYPPDSPWVTAARAALAVVVVLSYPLQAHPSRRCFLTLLR-----------SARRGGGGGVRALGALGALD------IDAEAVPVATL------VADAHTAAADGDVGAPTLAGATCAR--DRAAHAVAXXXXXXXXXXXXXX-----XXXXERIERPADGRCARR---------LLIGSDEQRSDAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQLQPIVLS---GLGFPES----------------------GGAYSAYTAAFLAGSLLIALAVDDLGVVMAVVGATGSTAVSYILPGAIYWVLHPHPHAMRFAAGAMFAAGVCITPVSLAAILTSHG 565
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A7S2WEX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEX7_9STRA) HSP 1 Score: 115 bits (287), Expect = 9.500e-25 Identity = 109/416 (26.20%), Postives = 142/416 (34.13%), Query Frame = 1
Query: 7 LPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHS 1254
L +FVF FTCHQNIF I NE+ PTP RVD VI S++VA +Y+++ W Y TFG V+ D+L + + +++ AR+ V++LV YPLQ HPSR CI+S + AY PS R H S+V +LGV T FL LS TIA+AV LG +L +VGATGSTTV+++LPG+ Y K+ PEPH KR LA QL GL I+P ALT IA+ +S
Sbjct: 199 LTVFVFGFTCHQNIFAIANEMKLPTPRRVDRVIVSSIVVAFFVYLAVGWAGYMTFGDNVESDVLVNFGGSPVVSAARLFVALLVCFSYPLQCHPSRACIISI-------IHSAY---------------------PSSRDHE--------------SLV-------------------------------------------------------------------------------YLGV-----------------------------------------------------------------------------------------------TGTFLVLSLTIALAVTKLGTVLAIVGATGSTTVSYILPGICYFKMFPEPHLKRWLALGQLCAGLFIMPAALTLIAIENS 398
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A835YKE8_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE8_9STRA) HSP 1 Score: 110 bits (275), Expect = 5.810e-23 Identity = 51/103 (49.51%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 309
+ L IFVF +TCHQNIF +CNE+ PT R+ VIA ++ A +++SI+W A+ATFG V ++L Y + LT AR+CV++LV++ YPLQAHPSR I++
Sbjct: 216 RVLSIFVFSYTCHQNIFGVCNELREPTQGRIKAVIAVAVATAAAVHLSISWSAFATFGTNVSDNILNNYAKGLPLTVARVCVALLVSTGYPLQAHPSRRSIVT 318
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: F0XYI5_AURAN (Uncharacterized protein AOT5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYI5_AURAN) HSP 1 Score: 109 bits (272), Expect = 1.530e-22 Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 309
+T+ IF+F +TCHQNIF + NEI RPTPAR+D V+A S+ A +Y+ +A Y TFG V GD+L YP +T AR+ V+ LV +PLQ HPSR C++S
Sbjct: 219 KTMTIFIFGYTCHQNIFAVVNEIKRPTPARLDAVVATSIGTACGIYLLVAVCGYMTFGDKVQGDILDNYPVEPAITVARVFVAALVALSFPLQCHPSRACVMS 321
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A6S8D239_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8D239_9STRA) HSP 1 Score: 107 bits (267), Expect = 8.310e-22 Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTW-KAFSLDMEEAY 348
+T+ IFVF FTCHQNIF++ EI RPT R+ VI S+ +A ++Y+++AW Y TFG V GD+L Y + + AR+ V+ LV YPLQ HPSR C LS + FS + E+Y
Sbjct: 206 KTMTIFVFGFTCHQNIFSVVTEIKRPTSQRISFVIFFSLFIACSVYIAVAWSGYHTFGKKVQGDILDNYNASPAVDVARLFVAALVAFSYPLQCHPSRNCFLSLLDQCFSSNSIESY 322
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A7S3PBN1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PBN1_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.760e-21 Identity = 111/414 (26.81%), Postives = 160/414 (38.65%), Query Frame = 1
Query: 7 LPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALG 1248
LPIF+F FTCHQNIF + NEI + R++ VI ++ A+ ++ ++A Y TFG V GD+L YP T ++T RIC+++LV YPLQ PSR CI S K VV Q+ +RR G++I F RR +A+V++ + + GEL + E +G + H D DI F+T VT FL LS+ +AM V+DLG++L +VGATGST V+++LPGLLY+K+ P + + A +QL G +I+P AL F+ G
Sbjct: 264 LPIFIFSFTCHQNIFPVVNEIQDRSQTRLNAVIFLAIGFALLLFSTVALEGYFTFGSNVMGDVLLNYPETAIVTILRICIAILVALSYPLQLDPSRRCITSLIK-----------------------------------------------------VV--------------------------QQWRRR----GQLI-----------------RVFH--------RRESADVDSVMM------KEGEL----GELSALDSFLSQQNESEG-----------KDHQFMSD--DI----------------------------FYT---------VTVTFLLLSFLVAMVVDDLGIVLAMVGATGSTLVSYILPGLLYVKIDPHMNATKVSAMIQLVAGCVIMPTALFFVISG 509
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: R1FE80_EMIHU (Aromatic amino acid permease n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FE80_EMIHU) HSP 1 Score: 102 bits (255), Expect = 2.800e-20 Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 1
Query: 1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPR-TGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKA 321
LP+FVF +TCHQNIF+I NE+ PTP R V ++ A+ +Y+ + Y+TFG VD D+L +YP G++ AR+ +S++V+ CYPLQAHPSR C S +A
Sbjct: 233 HALPLFVFSYTCHQNIFSITNELSDPTPQRNIKVCVLAVGAALAVYIILGASGYSTFGGLVDHDILASYPSDNGIVAVARLAISLVVSCCYPLQAHPSRACTTSIVRA 340
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A8J2WTB1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTB1_9STRA) HSP 1 Score: 101 bits (252), Expect = 6.380e-20 Identity = 64/155 (41.29%), Postives = 82/155 (52.90%), Query Frame = 1
Query: 1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASG--PPEAP 459
+ LPIFVF FTCHQNIF + NE+ PT R+D V+ ++ +A+ Y+ IA YATFG + D+L Y + AR+ V++ VTS PLQ HPSR CI SL D D Y+ D SPS RR + PPEAP
Sbjct: 199 KNLPIFVFGFTCHQNIFAVNNELRDPTRRRLDLVVVGAVSLALAFYLIIANAGYATFGASIHSDVLTNYAAAPAIALARVAVALEVTSAIPLQLHPSRECI---------------KSLLQRDAPAAD-YSLIDGESPSRRRSSSQGDDDPPEAP 337 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7173.18286.1 >prot_Ecto-sp13_S_contig7173.18286.1 ID=prot_Ecto-sp13_S_contig7173.18286.1|Name=mRNA_Ecto-sp13_S_contig7173.18286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAback to top mRNA from alignment at Ecto-sp13_S_contig7173:365..4445+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7173.18286.1 ID=mRNA_Ecto-sp13_S_contig7173.18286.1|Name=mRNA_Ecto-sp13_S_contig7173.18286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4081bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7173:365..4445+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7173:365..4445+ >mRNA_Ecto-sp13_S_contig7173.18286.1 ID=mRNA_Ecto-sp13_S_contig7173.18286.1|Name=mRNA_Ecto-sp13_S_contig7173.18286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7173:365..4445+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |