mRNA_Ecto-sp13_S_contig7173.18286.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7173.18286.1
Unique NamemRNA_Ecto-sp13_S_contig7173.18286.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: D7G1F5_ECTSI (Amino acid/polyamine transporter n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1F5_ECTSI)

HSP 1 Score: 707 bits (1825), Expect = 3.430e-250
Identity = 382/421 (90.74%), Postives = 392/421 (93.11%), Query Frame = 1
Query:    1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEG 1263
            QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSM VAI +YMSIAWGAYATFGVGVDGDLLKTYPRTGLLT ARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDM+EAYSSLATDDGAG +K TAEDSISPSLRRHRNASGPPEAPLSSTGSVVAD +T+ASPNSLG R+GG S +S+PGQRGKRRLLGGGE IGG TSAAQGGVGGD  NTRFESQEGG DARRGTAEVE RFLGVEDREQRGELLSE A     XXXXXXX EE G+GRGGGEHVGWRQHHLQ DAADIESAGRGR FPRTVCSAGQAA EGEG  AFWTSP+G RHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEG
Sbjct:  322 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMAVAIAIYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTAARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMQEAYSSLATDDGAGTEKDTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADGSTAASPNSLGSRDGGASPSSDPGQRGKRRLLGGGEAIGGPTSAAQGGVGGDGHNTRFESQEGGEDARRGTAEVETRFLGVEDREQRGELLSEGA----AXXXXXXXDEEAGVGRGGGEHVGWRQHHLQGDAADIESAGRGRTFPRTVCSAGQAAVEGEGETAFWTSPEGLRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHSAEG 738          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A7S2BAD5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BAD5_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.480e-27
Identity = 111/413 (26.88%), Postives = 147/413 (35.59%), Query Frame = 1
Query:    1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFI 1239
            + L +F+F FTC QN+F I NE+  PTP RV++VI  ++ +A+T+Y+ +A   Y TFG  V+ D+L  Y   G+ TTAR  V++LV   YPLQ HPSR+CI S                                                        +V                               RLL        + SA++                                                                                                                EG+A  W       HI +TA FLA SY IA+ V DLGVIL +VGATGST V++VLPGL Y +L PEPH KR+LA +Q  +G +IIP+ALTFI
Sbjct:   56 RVLTVFIFGFTCQQNVFAITNELKDPTPPRVNSVILRAVGLALTVYILVAVAGYGTFGDSVESDILTNYGTGGITTTARFFVALLVCFSYPLQCHPSRMCITS--------------------------------------------------------IV-------------------------------RLL--------VPSASE----------------------------------------------------------------------------------------------------------------EGQARIW-------HIGITAVFLAASYLIALVVTDLGVILAIVGATGSTMVSYVLPGLCYFRLFPEPHIKRNLALVQFGLGCVIIPLALTFI 254          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A8J5XBN8_DIALT (Aa_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XBN8_DIALT)

HSP 1 Score: 120 bits (300), Expect = 8.210e-26
Identity = 131/419 (31.26%), Postives = 184/419 (43.91%), Query Frame = 1
Query:    1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTG-LLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHS 1254
            + L IFVF FTC QN+F++ NE+ +PT AR+D V+  S+L+A+ +Y+ +  G Y T+G  V  D+L +YP     +T AR  ++++V   YPLQAHPSR C L+  +           S     G G+    A  ++        +A   P A L      VAD++T+A+   +G     G+  +    R    +                         R E    G  ARR         L +   EQR + +       XXXXXXXXXX                     +    + S   G  FP +                      G  +   TAAFLA S  IA+AV+DLGV++ VVGATGST V+++LPG +Y  LHP PH  R  A    A G+ I PV+L  I   H 
Sbjct:  211 RVLSIFVFGFTCQQNVFSVVNELRKPTLARIDLVVGASVLLALALYLPVGVGGYLTYGSHVAPDVLLSYPPDSPWVTAARAALAVVVVLSYPLQAHPSRRCFLTLLR-----------SARRGGGGGVRALGALGALD------IDAEAVPVATL------VADAHTAAADGDVGAPTLAGATCAR--DRAAHAVAXXXXXXXXXXXXXX-----XXXXERIERPADGRCARR---------LLIGSDEQRSDAIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVQLQPIVLS---GLGFPES----------------------GGAYSAYTAAFLAGSLLIALAVDDLGVVMAVVGATGSTAVSYILPGAIYWVLHPHPHAMRFAAGAMFAAGVCITPVSLAAILTSHG 565          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A7S2WEX7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WEX7_9STRA)

HSP 1 Score: 115 bits (287), Expect = 9.500e-25
Identity = 109/416 (26.20%), Postives = 142/416 (34.13%), Query Frame = 1
Query:    7 LPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALGHS 1254
            L +FVF FTCHQNIF I NE+  PTP RVD VI  S++VA  +Y+++ W  Y TFG  V+ D+L  +  + +++ AR+ V++LV   YPLQ HPSR CI+S        +  AY                     PS R H               S+V                                                                               +LGV                                                                                               T  FL LS TIA+AV  LG +L +VGATGSTTV+++LPG+ Y K+ PEPH KR LA  QL  GL I+P ALT IA+ +S
Sbjct:  199 LTVFVFGFTCHQNIFAIANEMKLPTPRRVDRVIVSSIVVAFFVYLAVGWAGYMTFGDNVESDVLVNFGGSPVVSAARLFVALLVCFSYPLQCHPSRACIISI-------IHSAY---------------------PSSRDHE--------------SLV-------------------------------------------------------------------------------YLGV-----------------------------------------------------------------------------------------------TGTFLVLSLTIALAVTKLGTVLAIVGATGSTTVSYILPGICYFKMFPEPHLKRWLALGQLCAGLFIMPAALTLIAIENS 398          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A835YKE8_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE8_9STRA)

HSP 1 Score: 110 bits (275), Expect = 5.810e-23
Identity = 51/103 (49.51%), Postives = 73/103 (70.87%), Query Frame = 1
Query:    1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 309
            + L IFVF +TCHQNIF +CNE+  PT  R+  VIA ++  A  +++SI+W A+ATFG  V  ++L  Y +   LT AR+CV++LV++ YPLQAHPSR  I++
Sbjct:  216 RVLSIFVFSYTCHQNIFGVCNELREPTQGRIKAVIAVAVATAAAVHLSISWSAFATFGTNVSDNILNNYAKGLPLTVARVCVALLVSTGYPLQAHPSRRSIVT 318          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: F0XYI5_AURAN (Uncharacterized protein AOT5 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYI5_AURAN)

HSP 1 Score: 109 bits (272), Expect = 1.530e-22
Identity = 52/103 (50.49%), Postives = 70/103 (67.96%), Query Frame = 1
Query:    1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILS 309
            +T+ IF+F +TCHQNIF + NEI RPTPAR+D V+A S+  A  +Y+ +A   Y TFG  V GD+L  YP    +T AR+ V+ LV   +PLQ HPSR C++S
Sbjct:  219 KTMTIFIFGYTCHQNIFAVVNEIKRPTPARLDAVVATSIGTACGIYLLVAVCGYMTFGDKVQGDILDNYPVEPAITVARVFVAALVALSFPLQCHPSRACVMS 321          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A6S8D239_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A6S8D239_9STRA)

HSP 1 Score: 107 bits (267), Expect = 8.310e-22
Identity = 55/117 (47.01%), Postives = 75/117 (64.10%), Query Frame = 1
Query:    1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTW-KAFSLDMEEAY 348
            +T+ IFVF FTCHQNIF++  EI RPT  R+  VI  S+ +A ++Y+++AW  Y TFG  V GD+L  Y  +  +  AR+ V+ LV   YPLQ HPSR C LS   + FS +  E+Y
Sbjct:  206 KTMTIFVFGFTCHQNIFSVVTEIKRPTSQRISFVIFFSLFIACSVYIAVAWSGYHTFGKKVQGDILDNYNASPAVDVARLFVAALVAFSYPLQCHPSRNCFLSLLDQCFSSNSIESY 322          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A7S3PBN1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PBN1_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.760e-21
Identity = 111/414 (26.81%), Postives = 160/414 (38.65%), Query Frame = 1
Query:    7 LPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPPEAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEVIGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQRGELLSEVAHAAXXXXXXXXXXEEDGLGRGGGEHVGWRQHHLQRDAADIESAGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTIAMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLAVGLLIIPVALTFIALG 1248
            LPIF+F FTCHQNIF + NEI   +  R++ VI  ++  A+ ++ ++A   Y TFG  V GD+L  YP T ++T  RIC+++LV   YPLQ  PSR CI S  K                                                     VV                          Q+ +RR    G++I                   F         RR +A+V++  +      + GEL       +          E +G           + H    D  DI                            F+T         VT  FL LS+ +AM V+DLG++L +VGATGST V+++LPGLLY+K+ P  +  +  A +QL  G +I+P AL F+  G
Sbjct:  264 LPIFIFSFTCHQNIFPVVNEIQDRSQTRLNAVIFLAIGFALLLFSTVALEGYFTFGSNVMGDVLLNYPETAIVTILRICIAILVALSYPLQLDPSRRCITSLIK-----------------------------------------------------VV--------------------------QQWRRR----GQLI-----------------RVFH--------RRESADVDSVMM------KEGEL----GELSALDSFLSQQNESEG-----------KDHQFMSD--DI----------------------------FYT---------VTVTFLLLSFLVAMVVDDLGIVLAMVGATGSTLVSYILPGLLYVKIDPHMNATKVSAMIQLVAGCVIMPTALFFVISG 509          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: R1FE80_EMIHU (Aromatic amino acid permease n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FE80_EMIHU)

HSP 1 Score: 102 bits (255), Expect = 2.800e-20
Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 1
Query:    1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPR-TGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKA 321
              LP+FVF +TCHQNIF+I NE+  PTP R   V   ++  A+ +Y+ +    Y+TFG  VD D+L +YP   G++  AR+ +S++V+ CYPLQAHPSR C  S  +A
Sbjct:  233 HALPLFVFSYTCHQNIFSITNELSDPTPQRNIKVCVLAVGAALAVYIILGASGYSTFGGLVDHDILASYPSDNGIVAVARLAISLVVSCCYPLQAHPSRACTTSIVRA 340          
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Match: A0A8J2WTB1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WTB1_9STRA)

HSP 1 Score: 101 bits (252), Expect = 6.380e-20
Identity = 64/155 (41.29%), Postives = 82/155 (52.90%), Query Frame = 1
Query:    1 QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIAWGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVCILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASG--PPEAP 459
            + LPIFVF FTCHQNIF + NE+  PT  R+D V+  ++ +A+  Y+ IA   YATFG  +  D+L  Y     +  AR+ V++ VTS  PLQ HPSR CI                SL   D    D Y+  D  SPS RR  +     PPEAP
Sbjct:  199 KNLPIFVFGFTCHQNIFAVNNELRDPTRRRLDLVVVGAVSLALAFYLIIANAGYATFGASIHSDVLTNYAAAPAIALARVAVALEVTSAIPLQLHPSRECI---------------KSLLQRDAPAAD-YSLIDGESPSRRRSSSQGDDDPPEAP 337          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7173.18286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1F5_ECTSI3.430e-25090.74Amino acid/polyamine transporter n=2 Tax=Ectocarpu... [more]
A0A7S2BAD5_9STRA1.480e-2726.88Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J5XBN8_DIALT8.210e-2631.26Aa_trans domain-containing protein n=1 Tax=Diacron... [more]
A0A7S2WEX7_9STRA9.500e-2526.20Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835YKE8_9STRA5.810e-2349.51Transmembrane amino acid transporter protein-domai... [more]
F0XYI5_AURAN1.530e-2250.49Uncharacterized protein AOT5 n=1 Tax=Aureococcus a... [more]
A0A6S8D239_9STRA8.310e-2247.01Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3PBN1_9STRA1.760e-2126.81Hypothetical protein (Fragment) n=1 Tax=Amphora co... [more]
R1FE80_EMIHU2.800e-2046.30Aromatic amino acid permease n=3 Tax=Emiliania hux... [more]
A0A8J2WTB1_9STRA6.380e-2041.29Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7173contigEcto-sp13_S_contig7173:365..4445 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score715.3
Seed ortholog evalue1.7e-203
Seed eggNOG ortholog2880.D7G1F5
Preferred nameAVT7
Model size1266
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0003333,GO:0003674,GO:0005215,GO:0005290,GO:0005302,GO:0005310,GO:0005313,GO:0005326,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0006950,GO:0006995,GO:0007034,GO:0007154,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015075,GO:0015171,GO:0015172,GO:0015173,GO:0015174,GO:0015175,GO:0015179,GO:0015181,GO:0015183,GO:0015189,GO:0015194,GO:0015238,GO:0015318,GO:0015556,GO:0015711,GO:0015740,GO:0015800,GO:0015801,GO:0015802,GO:0015804,GO:0015807,GO:0015809,GO:0015813,GO:0015817,GO:0015819,GO:0015825,GO:0015828,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0022889,GO:0031090,GO:0031166,GO:0031224,GO:0031300,GO:0031301,GO:0031310,GO:0031667,GO:0031668,GO:0031669,GO:0032329,GO:0032974,GO:0032975,GO:0033554,GO:0034220,GO:0034486,GO:0034490,GO:0034491,GO:0042221,GO:0042493,GO:0042594,GO:0043090,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043562,GO:0044422,GO:0044424,GO:0044425,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045117,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0051938,GO:0055085,GO:0061459,GO:0070778,GO:0071496,GO:0071627,GO:0071628,GO:0071702,GO:0071705,GO:0071944,GO:0089709,GO:0090454,GO:0090513,GO:0090514,GO:0090515,GO:0090516,GO:0090517,GO:0090518,GO:0098588,GO:0098655,GO:0098656,GO:0098805,GO:0098852,GO:1901474,GO:1901481,GO:1901482,GO:1902022,GO:1902023,GO:1902024,GO:1902475,GO:1903400,GO:1903401,GO:1903825,GO:1903826,GO:1905039,GO:1990822
Exons4
EggNOG free text desc.amino acid
EggNOG OGsCOG0814@1,KOG1305@2759
Ec32 ortholog descriptionAmino acid transporter, transmembrane
Ec32 orthologEc-07_000830.1
Cds size1266
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463982.9090402-CDS-Ecto-sp13_S_contig7173:364..4701681463982.9090402-CDS-Ecto-sp13_S_contig7173:364..470Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7173 365..470 +
1681463982.922032-CDS-Ecto-sp13_S_contig7173:1454..16271681463982.922032-CDS-Ecto-sp13_S_contig7173:1454..1627Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7173 1455..1627 +
1681463982.9329357-CDS-Ecto-sp13_S_contig7173:3025..38321681463982.9329357-CDS-Ecto-sp13_S_contig7173:3025..3832Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7173 3026..3832 +
1681463982.9439113-CDS-Ecto-sp13_S_contig7173:4265..44451681463982.9439113-CDS-Ecto-sp13_S_contig7173:4265..4445Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7173 4266..4445 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7173.18286.1prot_Ecto-sp13_S_contig7173.18286.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7173 365..4445 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7173.18286.1

>prot_Ecto-sp13_S_contig7173.18286.1 ID=prot_Ecto-sp13_S_contig7173.18286.1|Name=mRNA_Ecto-sp13_S_contig7173.18286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=422bp
QTLPIFVFCFTCHQNIFTICNEIVRPTPARVDTVIACSMLVAITMYMSIA
WGAYATFGVGVDGDLLKTYPRTGLLTTARICVSMLVTSCYPLQAHPSRVC
ILSTWKAFSLDMEEAYSSLATDDGAGIDKYTAEDSISPSLRRHRNASGPP
EAPLSSTGSVVADSNTSASPNSLGCRNGGGSLNSEPGQRGKRRLLGGGEV
IGGLTSAAQGGVGGDLDNTRFESQEGGGDARRGTAEVEARFLGVEDREQR
GELLSEVAHAAAAAAAAAAPDEEDGLGRGGGEHVGWRQHHLQRDAADIES
AGRGRAFPRTVCSAGQAAGEGEGRAAFWTSPDGFRHIVVTAAFLALSYTI
AMAVNDLGVILEVVGATGSTTVAFVLPGLLYLKLHPEPHPKRSLATLQLA
VGLLIIPVALTFIALGHSAEG*
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mRNA from alignment at Ecto-sp13_S_contig7173:365..4445+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7173.18286.1 ID=mRNA_Ecto-sp13_S_contig7173.18286.1|Name=mRNA_Ecto-sp13_S_contig7173.18286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4081bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7173:365..4445+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACGCTGCCGATCTTCGTCTTCTGCTTCACGTGTCACCAGAACATCTT CACGATCTGCAACGAGATAGTCCGGCCGACGCCGGCAAGGGTTGACACCG TCATCGGTGAGAGAGTTAGGCGAGACTCTCACCTTGGATCTCGGAAGTTT CACGGGACTGTCATATATTAGGTCCTTCCCCCTCTCGCACCCGCCAGGCT TGGTGTTCTTCAATGGGGCAGGGTGCTGGCCGGATGGTTTTTTGTTCTCC TTGTTGCCCCTCTGTCCGTTGTTGGCTGCAGCGCCCGCGTCTCGGTGCTG GTTTCTGGCCTTAGCTTTCTCCTCCGCAACTGGGCACCCGCGCCTACTGC TACCGTCGCATCGAATCAAAAGTTGTATTTTTAGAAAATACACGCGTATC GTCGCTGAAAGATTTACCCTTTCGAGACCAAACTTCGGTGCTCCAGTCGA AGGGACCTGTTGAATGTAGTCTTTGCGGTGAACGGGAAATTAAAAACTGC TGGGTGCTGGGCTGATTTTGAGTTTGTTTTAACCTGATCACTGAAGGATA AGTGATGCCAGCTGGTACATACTATTCACAAGTCCGTTTACTGAAGGATA AGTGATAACAGCTGGTACATACTATTCACAAGTCCGTTCCTGGGCCGCGC CCGTGGCATGTAACGTGTACCTTACGTAGTAGGGGTGATGGCAAATTGGG GTGCTGGATGTTACCTGTGTGTGTTGCCAAACACCCACGATCAAATTTTG AGGAGCGGGAAACCTCCAGTGAGCGTGTGACCCGTCTCGGGAGGGGGCGG CACGGTTGTTAATGAAACGCCAGCCGGCCTTCTTGACCCTGACCCTACGT CGTCTGGTATCGAACAGACCCTTGTGTCGAGCCTCTATTTCGTTGAACCC AGTGTGCGCTCCAACAAACGGGGCCTTACTTCCTCCACCTCCGCACATGC CCCTAACGCTCACTATTGTCCAACTTTTCAGTCTCCGGCAGTGCTCCAGC AACGCACCCCTCTCTATGCCGTCCAAGAAGGAAGCAACTGACCACCACCC CTCCCCTCTGCCGTAACCTTTTGCCCGCCGAACCAAAAAGCCTGCTCCAT GCTCGTGGCCATAACGATGTACATGTCTATTGCATGGGGAGCTTACGCGA CGTTCGGTGTCGGTGTGGATGGGGACCTCCTGAAGACCTATCCGCGCACC GGTCTGCTCACGACGGCTCGGATCTGCGTGTCCATGCTGGTGACGTCATG CTACCCTCTGCAGGTGAGAAGGAATAAAAGGATAATTTGCCGCATTTCTA TAATCTTTCTTGCCGCAATGTTGGTGTACGCGATGCTGCTGCTGTTCCTG TTGTCTTGTCTAGAACGTGGTGCGAGCTAATGCTCGGGTTTGATGTGCGT GCGAATCCTCGCTGTGGTGGCAGCCTGTTATTTTTTCCACCTCACTCCGA AGCGGGAGTTTGGAGTTTGGGTGTATCCTCCCAACAAGTCCAAATATTGC CAAGCCTGTAAGTTTCTGCAGGCCAGTACGACAGATGACACGCCCTGCGC TTCTGTGCCTCCCCCCCCCGCCGATGATAGGGGTGCTTGCAGAACAGCAG TGCAAGTGTTGCTGTGCTATATTGTGATTCATTGTTGTTTATCGCGCATT TTGCCAACGTACATGGTTGACTTTGGGCAACACCCCCCTGACGAAGCCGC ACCCCTCGCACAATTAACTTGCCCTGAATGGAGGAAAATAATCTCCGATG AAAAACAAATGTGTTTACGAAGCACAGTACGCCGGTACTGAATACCCACA TCGTGTAAAAGGGGTTAAGCGCCCTCAGTGGACAGAATACCACATGGGGT TAAGGGAGTTTATATGCTCAAATATGATCAGCTTGATTCTATGCCACACG TCACAAAAGCCCAATGTGGATGCAGGCAAACGTGTGGTTGGATCCCGTCC TTCAGTCCGTGTTCCACATTAGTTCCATCCAAATATCACCAAGTCAAACG ATGGTATGCATGCGTTTGTGCGCCATAAGCTTTTCTGCAGGTTTTCTCGG TGCTTTGGCTGTTACCCATCATTGCCTTTCCCCCTGAACTGTGTGTGTTC TGCATCCACATTTCGTGTACTGCGTGGTGAAATCGCCGAAGTCGCTGGCT TACTCCTTCCGTGTTTTGAATAGACGTGCATGTGACACATTCCCGCGGCT CCTCTGATTTTTATTTCGATTCATGACAGTGAGCCTTGCAAACATTGTTA CCAAGGCAAGTTCCATTTCCCCGTACATGCACGCAAGATGCATATTTTTC TCTGTCGGCTAGACTCGGGTGTATTGGGCTGGCATACAGTGTTCCAAGAC CTATCTCCGCTCCGCGTGGGTGCTTCCAACAAACCACTCCCTCTTAGTAG CCACTTGTGTCTTGATGTCAAGCGCTGTTTTTCCTCTCAACCGTGACAAG AGAGTGCTGCATTATTCTCGCATCATATGTCGTAGGCAAGCACCGCAGGA GGGGTGGGTAAGGGGCCTTAGGGGGAGGACCCCTTGTGCGTAAGTACGGC TTGCGGCTCCAACGGCTGTAAGCGCTGTCGAAGTCTTGAACATATAAACA TAGTAATCCCCTCGCCCTGGCCACGAATTGCTCGTTTCTTTTGGTGCATC CATCCCTAAAGGCACACCCGAGCCGCGTGTGCATCCTGTCAACATGGAAG GCGTTTTCCCTGGACATGGAGGAGGCATACTCCAGCCTCGCCACAGACGA CGGCGCCGGGATAGATAAGTACACCGCCGAGGACTCAATCTCGCCGTCCC TTCGGCGCCACCGAAACGCTTCCGGTCCGCCGGAAGCCCCCCTCTCCAGC ACCGGCAGCGTCGTCGCAGATAGCAACACCTCTGCCTCGCCGAATAGCCT TGGCTGTAGAAACGGGGGGGGGTCGCTGAACTCGGAGCCGGGACAGCGTG GCAAGAGGCGTCTGCTGGGCGGCGGGGAAGTGATCGGTGGGCTGACGTCT GCTGCCCAGGGCGGTGTTGGAGGAGACCTCGATAACACGCGTTTCGAATC ACAAGAGGGGGGAGGAGATGCCCGGCGGGGGACGGCGGAGGTAGAAGCGC GGTTTTTGGGGGTGGAAGACCGCGAGCAGCGGGGGGAGCTACTGTCGGAG GTCGCCCACGCCGCCGCCGCCGCCGCCGCCGCCGCCGCTCCGGACGAGGA GGACGGCTTGGGGAGAGGGGGTGGGGAACACGTGGGGTGGCGGCAGCACC ATCTCCAGAGGGACGCCGCGGATATTGAGTCGGCGGGGCGGGGGCGAGCG TTCCCGAGAACGGTCTGTTCTGCAGGGCAGGCCGCCGGAGAGGGGGAGGG AAGGGCGGCCTTCTGGACGTCGCCGGACGGGTTCCGACATATCGTGGTCA CGGCGGCGTTCTTGGCGCTGTCGTACACGATAGCGATGGCGGTGAACGAC TTGGGCGTCATTCTGGAGGTGGGTGTGCCACGAGAGGGAGAGAGGAGAGG CCGGGGGGAGGCATATGTCGCGTACAGTAACACAAGCTTTTCGCAATGTT CGAAGAAAGATGGATTGTTATTGCTACGGCTACGGTACCCAAAGAAAAGC TTCAACGGTCGATATGCTACTGCTGGTTTGCTTCGTGTTCTCCAACAACC CGCATCTCATTCCCGGATGTACGTGATGGCCCCGACTGAAACAGCCGGTG CCTGCACGCCCTATCCAGCTCGAGCCCATCGCCTTTGAGCAAAACCGCCG TTGATTGTCCCCGCTCTCACTAGTGTCGACGTAAACTCCCAACCCTGAAG ACCTCTTGATACGTCGAGGATGGGTCTTACACGACGTCCTCGCGTTTAAG AACGTTTCGTTTTCAACCCCTCGCCGCTTCCCCCTCGTTCTCGCTGTGAA GGTTGTGGGAGCCACAGGATCGACTACCGTGGCCTTCGTGCTTCCGGGCC TCCTTTACCTCAAGCTTCACCCGGAGCCGCACCCAAAGCGAAGCCTGGCT ACGCTGCAGCTGGCTGTGGGTCTGCTCATCATCCCGGTCGCCTTGACTTT CATCGCCCTCGGGCACTCTGCGGAAGGCTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7173:365..4445+

>mRNA_Ecto-sp13_S_contig7173.18286.1 ID=mRNA_Ecto-sp13_S_contig7173.18286.1|Name=mRNA_Ecto-sp13_S_contig7173.18286.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1266bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7173:365..4445+ (Ectocarpus species13 EcNAP12_S_4_19m)
CAGACGCTGCCGATCTTCGTCTTCTGCTTCACGTGTCACCAGAACATCTT
CACGATCTGCAACGAGATAGTCCGGCCGACGCCGGCAAGGGTTGACACCG
TCATCGCCTGCTCCATGCTCGTGGCCATAACGATGTACATGTCTATTGCA
TGGGGAGCTTACGCGACGTTCGGTGTCGGTGTGGATGGGGACCTCCTGAA
GACCTATCCGCGCACCGGTCTGCTCACGACGGCTCGGATCTGCGTGTCCA
TGCTGGTGACGTCATGCTACCCTCTGCAGGCACACCCGAGCCGCGTGTGC
ATCCTGTCAACATGGAAGGCGTTTTCCCTGGACATGGAGGAGGCATACTC
CAGCCTCGCCACAGACGACGGCGCCGGGATAGATAAGTACACCGCCGAGG
ACTCAATCTCGCCGTCCCTTCGGCGCCACCGAAACGCTTCCGGTCCGCCG
GAAGCCCCCCTCTCCAGCACCGGCAGCGTCGTCGCAGATAGCAACACCTC
TGCCTCGCCGAATAGCCTTGGCTGTAGAAACGGGGGGGGGTCGCTGAACT
CGGAGCCGGGACAGCGTGGCAAGAGGCGTCTGCTGGGCGGCGGGGAAGTG
ATCGGTGGGCTGACGTCTGCTGCCCAGGGCGGTGTTGGAGGAGACCTCGA
TAACACGCGTTTCGAATCACAAGAGGGGGGAGGAGATGCCCGGCGGGGGA
CGGCGGAGGTAGAAGCGCGGTTTTTGGGGGTGGAAGACCGCGAGCAGCGG
GGGGAGCTACTGTCGGAGGTCGCCCACGCCGCCGCCGCCGCCGCCGCCGC
CGCCGCTCCGGACGAGGAGGACGGCTTGGGGAGAGGGGGTGGGGAACACG
TGGGGTGGCGGCAGCACCATCTCCAGAGGGACGCCGCGGATATTGAGTCG
GCGGGGCGGGGGCGAGCGTTCCCGAGAACGGTCTGTTCTGCAGGGCAGGC
CGCCGGAGAGGGGGAGGGAAGGGCGGCCTTCTGGACGTCGCCGGACGGGT
TCCGACATATCGTGGTCACGGCGGCGTTCTTGGCGCTGTCGTACACGATA
GCGATGGCGGTGAACGACTTGGGCGTCATTCTGGAGGTTGTGGGAGCCAC
AGGATCGACTACCGTGGCCTTCGTGCTTCCGGGCCTCCTTTACCTCAAGC
TTCACCCGGAGCCGCACCCAAAGCGAAGCCTGGCTACGCTGCAGCTGGCT
GTGGGTCTGCTCATCATCCCGGTCGCCTTGACTTTCATCGCCCTCGGGCA
CTCTGCGGAAGGCTAG
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