prot_Ecto-sp13_S_contig12167.1828.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12167.1828.1
Unique Nameprot_Ecto-sp13_S_contig12167.1828.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length333
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12167.1828.1 vs. uniprot
Match: A0A6H5K3M3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3M3_9PHAE)

HSP 1 Score: 530 bits (1366), Expect = 1.210e-186
Identity = 298/332 (89.76%), Postives = 305/332 (91.87%), Query Frame = 0 
Query:    1 MDSTNGLDSRSLLRINAHEESFLPVEVKVGWLSRQASMRSRASAMVGSRISQLDDAIRVRALLSILQSSSATKATPAARPGTPPSGAGAFSVAKIAQESCSTSEGEEGGRSRPKGKRHVRTDSGPPPDLQDLEVFARMAVAKIKVVLFQLASPAEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPSLDVETLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDGVDSLLEKAADTEKMDPSSLADVDLSAGEDVHQEGAADARDLSQEGASNHSAASALVLPSNAASAAALGGGTLDTAKKAVARLRRSTSWDQDEEGGEATTEVRLHE 332
            MDSTN LDSRSLLRINAHEE FLPVEVKVGWLSRQASMRSRASAMVGSRISQLDDAIRVRALLSILQS +AT A+  ARP TPPSGAGA S AKIAQ+ C  SEGEE  RS P GK HVRTDSGPPPD QDLEVFARMAVAKIKVVLFQLASPAEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFP+LDV TLMLPAHFRYRSLVAARHRYLLRKLGVLLDMED VDSLLEKAADTEKMDPSSLADVDLSAGEDVH+EGAADAR LSQEGASNHSAASALVLPSNAA AAA+GGGTL TAKKAVARLRRSTSWD+DEEGGEATTE    E
Sbjct:   80 MDSTNALDSRSLLRINAHEEFFLPVEVKVGWLSRQASMRSRASAMVGSRISQLDDAIRVRALLSILQSFNATTAS-VARPETPPSGAGASSAAKIAQDDCPASEGEEVSRSGPTGKGHVRTDSGPPPDPQDLEVFARMAVAKIKVVLFQLASPAEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPTLDVGTLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDCVDSLLEKAADTEKMDPSSLADVDLSAGEDVHEEGAADARALSQEGASNHSAASALVLPSNAAPAAAVGGGTLKTAKKAVARLRRSTSWDKDEEGGEATTEGETDE 410
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BLAST of mRNA_Ecto-sp13_S_contig12167.1828.1 vs. uniprot
Match: D8LJG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJG2_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 6.000e-151
Identity = 250/294 (85.03%), Postives = 256/294 (87.07%), Query Frame = 0 
Query:   38 MRSRASAMVGSRISQLDDAIRVRALLSILQSSSATKATPAARPGTPPSGAGAFSVAK---IAQESCSTSEGEEGGRSRPKGKRHVRTDSGPPPDLQDLEVFARMAVAKIKVVLFQLASPAEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPSLDVETLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDGVDSLLEKAADTEKMDPSSLADVDLSAGEDVHQEGAADARDLSQEGASNHSAASALVLPSNAASAAALGGGTLDTAKKAVARLRRSTSWDQDEEGGEATTEV 328
            MRSRASAMVGSRISQLDDAIRVRALLSILQSS                            IAQESCS S GEEG  SRPKGKRHVRTDSGPPPDLQDLEVFARMAVAKIKVVLFQLASP EVREREQQGKDVFDVYEGLLTSEALAKAAKEGFP+LDVETLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDGVDSLLEKAADTEKMDPSSLADVDLSAG+DV  EGAADAR LSQEGAS+HSAASALVLPSNAA AAA+GGGTLDTAKKAVARLRRS SWD+DEEGGEATTE+
Sbjct:    1 MRSRASAMVGSRISQLDDAIRVRALLSILQSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAQESCSASGGEEGSGSRPKGKRHVRTDSGPPPDLQDLEVFARMAVAKIKVVLFQLASPVEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPTLDVETLMLPAHFRYRSLVAARHRYLLRKLGVLLDMEDGVDSLLEKAADTEKMDPSSLADVDLSAGDDVDDEGAADARALSQEGASSHSAASALVLPSNAAPAAAVGGGTLDTAKKAVARLRRSISWDKDEEGGEATTEI 294
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12167.1828.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K3M3_9PHAE1.210e-18689.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJG2_ECTSI6.000e-15185.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12167contigEcto-sp13_S_contig12167:2617..4706 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12167.1828.1mRNA_Ecto-sp13_S_contig12167.1828.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12167 2617..4706 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12167.1828.1 ID=prot_Ecto-sp13_S_contig12167.1828.1|Name=mRNA_Ecto-sp13_S_contig12167.1828.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=333bp
MDSTNGLDSRSLLRINAHEESFLPVEVKVGWLSRQASMRSRASAMVGSRI
SQLDDAIRVRALLSILQSSSATKATPAARPGTPPSGAGAFSVAKIAQESC
STSEGEEGGRSRPKGKRHVRTDSGPPPDLQDLEVFARMAVAKIKVVLFQL
ASPAEVREREQQGKDVFDVYEGLLTSEALAKAAKEGFPSLDVETLMLPAH
FRYRSLVAARHRYLLRKLGVLLDMEDGVDSLLEKAADTEKMDPSSLADVD
LSAGEDVHQEGAADARDLSQEGASNHSAASALVLPSNAASAAALGGGTLD
TAKKAVARLRRSTSWDQDEEGGEATTEVRLHE*
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