prot_Ecto-sp13_S_contig716.18265.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig716.18265.1
Unique Nameprot_Ecto-sp13_S_contig716.18265.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length562
Homology
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BLAST of mRNA_Ecto-sp13_S_contig716.18265.1 vs. uniprot
Match: D8LRX6_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX6_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 3.750e-196
Identity = 487/550 (88.55%), Postives = 494/550 (89.82%), Query Frame = 0 
Query:   13 MAAVGLHFVDLHSAAKQDDMMGVVKLLEEGAPIDKRDPYGYTPLHWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPPAAAPATTMLALXXXXXXXXXXXXXXXXXXX-GANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAENGVFALWDTSLGLGAGDAVPSASGMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASAATTTGGAKDSTTKGVXXXXXXXTANLEGLLGVSSAPAAASSSPGGGATSPATAVTDSPAVAPKSVTGSSEDSTTGLFGEMSVSAREALADGAAAPEGASPNSVSGGGRRTDGGMVSVPPAKRHRSTAAAEVGGSAADSTGAEGAGSMGETELREQLERQNRLLAEMAKELEGLRRERSVGAVGNGGGGVAGMGEGSAVLPVLDDRGLAHKVR 561
            MAA GL FVDLHSAAKQDD+M VVKLLEEGAPIDKRDPYGYTPL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPP A+PA+ MLAL XXXXXXXXXXXXXXXXXX GANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A ENGVFALWDTSLG GAGDA P   GMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAAS                XXXXXXXTANLEGL G+SSAPA ASSSP GGATSPATAVTD+P VAPKSVTGSSEDSTTGLFG+MSVSAR+A ADG AA EGASPNSV GGGRRTDGGMVSVPPAKR RSTAAAEVGG   DS GAEGAGSMGETELREQL RQNRLLAEMAKELEGLRRE S GA GN  G    MGEGSAVLPVLDDRGLAHKVR
Sbjct:    1 MAAAGLQFVDLHSAAKQDDIMAVVKLLEEGAPIDKRDPYGYTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPPTASPASAMLALPXXXXXXXXXXXXXXXXXXXGANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVENGVFALWDTSLGPGAGDAGPG--GMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASXXXXXXXXXXXXXXXXXXXXXXXTANLEGLFGISSAPAEASSSPSGGATSPATAVTDAPVVAPKSVTGSSEDSTTGLFGDMSVSARDASADGTAAQEGASPNSVGGGGRRTDGGMVSVPPAKRPRSTAAAEVGGIVGDSAGAEGAGSMGETELREQLTRQNRLLAEMAKELEGLRREMSGGAAGNRSGSGGDMGEGSAVLPVLDDRGLAHKVR 548
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig716.18265.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRX6_ECTSI3.750e-19688.55Chain A, Crystal Structure Of A Designed Full Cons... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 324..344
NoneNo IPR availableCOILSCoilCoilcoord: 498..525
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 22..152
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 96..164
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 96..164
NoneNo IPR availablePANTHERPTHR24189:SF55IQ MOTIF AND ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN LOC642574-RELATEDcoord: 22..152
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 100..114
score: 39.12
coord: 52..67
score: 40.56
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 51..80
e-value: 1.5E-7
score: 41.1
coord: 117..146
e-value: 1.0E-4
score: 31.6
coord: 18..47
e-value: 920.0
score: 5.3
coord: 84..113
e-value: 2.5E-5
score: 33.7
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 118..148
e-value: 1.2E-4
score: 22.4
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 84..116
score: 13.063
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 51..83
score: 14.719
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 117..149
score: 11.942
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 23..114
e-value: 5.4E-18
score: 65.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 23..153
score: 43.317
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 20..197
e-value: 1.8E-46
score: 160.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 22..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig716contigEcto-sp13_S_contig716:1277..8022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig716.18265.1mRNA_Ecto-sp13_S_contig716.18265.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig716 1277..8022 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig716.18265.1 ID=prot_Ecto-sp13_S_contig716.18265.1|Name=mRNA_Ecto-sp13_S_contig716.18265.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp
DVYIVGQGDTTGMAAVGLHFVDLHSAAKQDDMMGVVKLLEEGAPIDKRDP
YGYTPLHWACQKGHTHTVQALLAAGANVHVRDKWRRTPLHRAAKEGHKDV
VAALLNSGAEINAQGDNNWTPLHCSSFHGKLEIVEMLLRNGADQAATDLR
GRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPPAAAPATTMLAL
PPSSTAPTLAAAPAAAAAAGANPGLQGAAPAGSSEGGSAAASAASASAAA
AAASAASAALAAENGVFALWDTSLGLGAGDAVPSASGMIDKDWTDPEDAA
WNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASAA
TTTGGAKDSTTKGVTKGITKGTANLEGLLGVSSAPAAASSSPGGGATSPA
TAVTDSPAVAPKSVTGSSEDSTTGLFGEMSVSAREALADGAAAPEGASPN
SVSGGGRRTDGGMVSVPPAKRHRSTAAAEVGGSAADSTGAEGAGSMGETE
LREQLERQNRLLAEMAKELEGLRRERSVGAVGNGGGGVAGMGEGSAVLPV
LDDRGLAHKVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf