mRNA_Ecto-sp13_S_contig716.18265.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig716.18265.1
Unique NamemRNA_Ecto-sp13_S_contig716.18265.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig716.18265.1 vs. uniprot
Match: D8LRX6_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRX6_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 3.750e-196
Identity = 487/550 (88.55%), Postives = 494/550 (89.82%), Query Frame = 1
Query:   37 MAAVGLHFVDLHSAAKQDDMMGVVKLLEEGAPIDKRDPYGYTPLHWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPPAAAPATTMLALXXXXXXXXXXXXXXXXXXX-GANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAENGVFALWDTSLGLGAGDAVPSASGMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASAATTTGGAKDSTTKGVXXXXXXXTANLEGLLGVSSAPAAASSSPGGGATSPATAVTDSPAVAPKSVTGSSEDSTTGLFGEMSVSAREALADGAAAPEGASPNSVSGGGRRTDGGMVSVPPAKRHRSTAAAEVGGSAADSTGAEGAGSMGETELREQLERQNRLLAEMAKELEGLRRERSVGAVGNGGGGVAGMGEGSAVLPVLDDRGLAHKVR 1683
            MAA GL FVDLHSAAKQDD+M VVKLLEEGAPIDKRDPYGYTPL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPP A+PA+ MLAL XXXXXXXXXXXXXXXXXX GANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  A ENGVFALWDTSLG GAGDA P   GMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAAS                XXXXXXXTANLEGL G+SSAPA ASSSP GGATSPATAVTD+P VAPKSVTGSSEDSTTGLFG+MSVSAR+A ADG AA EGASPNSV GGGRRTDGGMVSVPPAKR RSTAAAEVGG   DS GAEGAGSMGETELREQL RQNRLLAEMAKELEGLRRE S GA GN  G    MGEGSAVLPVLDDRGLAHKVR
Sbjct:    1 MAAAGLQFVDLHSAAKQDDIMAVVKLLEEGAPIDKRDPYGYTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQAATDLRGRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPPTASPASAMLALPXXXXXXXXXXXXXXXXXXXGANPGLQGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAVENGVFALWDTSLGPGAGDAGPG--GMIDKDWTDPEDAAWNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASXXXXXXXXXXXXXXXXXXXXXXXTANLEGLFGISSAPAEASSSPSGGATSPATAVTDAPVVAPKSVTGSSEDSTTGLFGDMSVSARDASADGTAAQEGASPNSVGGGGRRTDGGMVSVPPAKRPRSTAAAEVGGIVGDSAGAEGAGSMGETELREQLTRQNRLLAEMAKELEGLRREMSGGAAGNRSGSGGDMGEGSAVLPVLDDRGLAHKVR 548          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig716.18265.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRX6_ECTSI3.750e-19688.55Chain A, Crystal Structure Of A Designed Full Cons... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig716contigEcto-sp13_S_contig716:1277..8022 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score575.9
Seed ortholog evalue2.1e-161
Seed eggNOG ortholog2880.D8LRX6
Model size1687
KEGG koko:K04558,ko:K09256,ko:K21878
KEGG Pathwayko05012,map05012
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG0504@2759
Ec32 ortholog descriptionAnkyrin repeat
Ec32 orthologEc-08_002820.1
Cds size1686
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000,ko03036,ko03110
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig716.18265.1prot_Ecto-sp13_S_contig716.18265.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig716 1277..8022 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463981.081084-CDS-Ecto-sp13_S_contig716:1276..14311681463981.081084-CDS-Ecto-sp13_S_contig716:1276..1431Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig716 1277..1431 +
1681463981.091785-CDS-Ecto-sp13_S_contig716:1676..17611681463981.091785-CDS-Ecto-sp13_S_contig716:1676..1761Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig716 1677..1761 +
1681463981.1003308-CDS-Ecto-sp13_S_contig716:3784..38861681463981.1003308-CDS-Ecto-sp13_S_contig716:3784..3886Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig716 3785..3886 +
1681463981.1089342-CDS-Ecto-sp13_S_contig716:4938..50971681463981.1089342-CDS-Ecto-sp13_S_contig716:4938..5097Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig716 4939..5097 +
1681463981.1194692-CDS-Ecto-sp13_S_contig716:5605..60791681463981.1194692-CDS-Ecto-sp13_S_contig716:5605..6079Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig716 5606..6079 +
1681463981.1303816-CDS-Ecto-sp13_S_contig716:6794..74661681463981.1303816-CDS-Ecto-sp13_S_contig716:6794..7466Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig716 6795..7466 +
1681463981.1471379-CDS-Ecto-sp13_S_contig716:7983..80221681463981.1471379-CDS-Ecto-sp13_S_contig716:7983..8022Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig716 7984..8022 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig716.18265.1

>prot_Ecto-sp13_S_contig716.18265.1 ID=prot_Ecto-sp13_S_contig716.18265.1|Name=mRNA_Ecto-sp13_S_contig716.18265.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp
DVYIVGQGDTTGMAAVGLHFVDLHSAAKQDDMMGVVKLLEEGAPIDKRDP
YGYTPLHWACQKGHTHTVQALLAAGANVHVRDKWRRTPLHRAAKEGHKDV
VAALLNSGAEINAQGDNNWTPLHCSSFHGKLEIVEMLLRNGADQAATDLR
GRTSAAVCDMGLYDVDQSVKDRIIQLLKNPPVRQLEAPPAAAPATTMLAL
PPSSTAPTLAAAPAAAAAAGANPGLQGAAPAGSSEGGSAAASAASASAAA
AAASAASAALAAENGVFALWDTSLGLGAGDAVPSASGMIDKDWTDPEDAA
WNEMWAMLHVPDPDNPDNNLYSEVKTLRHDVKRLRSDLNETASNDAASAA
TTTGGAKDSTTKGVTKGITKGTANLEGLLGVSSAPAAASSSPGGGATSPA
TAVTDSPAVAPKSVTGSSEDSTTGLFGEMSVSAREALADGAAAPEGASPN
SVSGGGRRTDGGMVSVPPAKRHRSTAAAEVGGSAADSTGAEGAGSMGETE
LREQLERQNRLLAEMAKELEGLRRERSVGAVGNGGGGVAGMGEGSAVLPV
LDDRGLAHKVR*
back to top

mRNA from alignment at Ecto-sp13_S_contig716:1277..8022+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig716.18265.1 ID=mRNA_Ecto-sp13_S_contig716.18265.1|Name=mRNA_Ecto-sp13_S_contig716.18265.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6746bp|location=Sequence derived from alignment at Ecto-sp13_S_contig716:1277..8022+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACGTGTACATAGTGGGGCAAGGTGACACCACCGGGATGGCGGCGGTCGG CTTGCATTTTGTCGACCTCCACTCGGCCGCGAAACAGGATGACATGATGG GCGTCGTGAAGCTGCTCGAGGAGGGAGCCCCAATCGACAAGAGAGACCCC TACGGGTAAGTAGGGAGACAATCACGAATCGAAGCGAAGAAACAACTTTC GCCGTGTAGCTGCTGCTGGTGATGAAGCTTTCGCGGAGGGGGCTGCTGAG AGCAGCGTTTCGTGCTCGAGTGTGAGAGCGCCACAAGGCTTCAATGTCGT TCTTACTTTCAATTGGCGCTGTCAGAACAAGAGGCAACCCCAGAGACCAT GATAACCCGCAGAAGCAGTGGCTGATCTCGCTCTCTCCGCCATCCCGCAG ATACACCCCCCTCCACTGGGCGTGCCAGAAGGGACACACGCACACCGTGC AGGCACTCCTTGCCGCGGGGGCCAACGTTCATGTGGTGAGTTTTGGATAC AGATCGTTTGCAGAGAGAGCGGTTCGAGAGGAGAGCAAGCAATGCACAGC CAACAGCAGCGTACATGTATTTTTGCTTTTTGACTGCAACCGCCGGCCGC AGTTTTGTGTCTCCAGTCTCCCTGTCTAGTCTCTCGAGGATGCGAGTGAC ACGATTAGGTTCTAATTGTCCAACTGAAAGTTCTGCTTGACACTTTAAGC TCATGTGCGCTCGTCAAGGGCACGCACCCGACAGTCGCCACTCGCTGAAA TGTCTCCTGTCTGCGCTCTTCACAGCTGCCCATTGGTGTGCGGAGAACCG AAAATTCTTTTCTGTCAAATCTTCTTCAGAATAAAATCTGAAGTTAGGCT CCCAAAAATGTTGCTCCGATCTGAACGGTGTTGGCGGGATCCGAAGGCGG TTTTGAAGCTCAACAGGACCGACAGCACCGGGACACCCCGAGTGCACCCT CTACCTTGAACAGTAGTCGAGGTGGTAGGGAGATCGCTCTGTCCCTCGCT GTCGTACAAAAGTATCCCATGAACCCCAAAGGGACGCACATTTAAAAAGC GATGCAGCTACACTACTTATTGCTAGGCCACGCATACAGACCTGGACCAG AACCGTTTACCACCACCCACCAGCAACCTAGCCCTACCCAGACAGTAACA ACCCAGCACCCACCCACGCGTGACAACCTTAGATTTGTCGTATCAATTGC CAACCTAGCACCTATTCCAATCAAAACAAACTAGAAATCGTTCGATCAAC ACCAACCTAGCTCCGATACCAGCACACCAACCTACCGCACTTATGTAGCC ACCCATCGCAAACCTAGCACCTGGGTGGGTTTGGGGCTACAGGGTTGAAA GTTTTTAGCCGGTTTCATGCCCTTACTTATATACAGAGAATCTCATATTT GTAGAAGTACCAGCTTGCGCATAGTGCAAACAACATCTGGCTGCCGGGTT CAAGGCTGGAACTCACTATCCTCTTTTTTCCTCCTTACGTACATGGGTCT TTGGCCTGTGAAAGGGTGTGGGAGCATGGCTGACATGCGCCCCCTTAGGT GCACACGGTATTTTTTTGGGCTGTGGTAGATAGGTCGCAGCCGGCCCGAT CTAGTTGTCTACGCCGATTTTCCCGACTTCATGGCCGTCTTCAGATTTCA GAGATTTCATGTGTTACGTCATACACTTTTCTCGCATGAGGGAGGGAACG ATGGAAGGAAAAATCCTTTTGTTTGTAATTTATTTGTATGCATACAGAAG TAGTCCATACCTGACACAAGTCGGGTCCGAGGAAGCGATGCACGCCAGTC GGGTCCTAGCTGGCATTTTTCAAAGTACTGGCGCCCTCCTATCCTCCAAG GTATTCCTGTGTCACGTACGCATTCAAACAACTTGTTCGCACACCTCAGC CGTGAGTGTTGTACCACTCCCGAACGGATGCACACGTCGAAACTTGTGCT GGTGTCGTTCTTTGTTCTTTAATGCAGACACAAGTCGACGCAGAAAAGCT GAAAAATCGATGCAGTCGCGGGGACTCACGTAAGCTACCTAGCACCTTTT GGGTAGGTTTGGGGGTAGGGTTAGGGTTAGCGCAAGGGGTTTTAGCCGGT TTGGTTTACTTAAACACTGGTTGGAAGGACAGAAAACTGCGCTGTCTGCC TGTAGTATAGAGCAACAGGTGGAAGAAGCAAGAATCGCGTATGCATACAT GTTCCTGACGCTCGTTCCTCACACAGGATTTCCGTCGGTAAAAACTTGTG GGTCCATGGCTTATATGCGTTCCTATGGGTGCATAAATTGTTTTGGGCAG AAAAGCGTAGTGTCTTCTGTGCGGAGTAAATGCCAGGTAAATCGTCAAAC CAACCATTTGCACTCGGCGTGTTTGTTGTCAGTTTCAGAGTCGTTCGGTG GCTCTAATGACAACTTGGACTCCGGATTCCGCGTGTTTTCGGGCAAAAGT GGTCACATGCAACTGACCCGCACCCATTGTGCTCCCCAATGCATGAAATT ATACAAAGCGAGACAAATGGAGACGCACCCCTCTGCACCGCGCTGCTAAG GAGGGCCACAAGGACGTCGTCGCCGCGCTGCTCAACTCGGGGGCGGAAAT CAACGCTCAGGTAAATGAATGTTACTCCGTTGGCGTGCCCTCCTGTTTTC CTTTCTCACAGCGCGCGTAATAAGACCGCATTTAACAGCCAGCTGCTGGC CAAGAAGAGAGGACTCATGGCCCCCACCCGCCCGAACCTTTGCTGCTGTT CGGCGTGGACCAGAGATTGAAATGTAGAAGTAAGTGTGCTTGTTTGTTTA TGGAGTGAACTCCTTCGAGAGACTCGCCCGGCCGAACCGTACAGCAGTTT TCGGTATTTACCACGGGTAGTTGAAGGAGCCTCATACACTGCTGCTTCCT AATACCACTTGTTTTCTTGCAGATGCCGCGTGAGTGGTGGGCACCCTGGG TACGAGCTCATCTGCTTGAATACCCTGGGCAATAGACAGGAAATAGATAT GGAACATTGCGGCTGCAGCATCCCTCAACAGTAGGTGGCAATAGGCATTG CTGGCAATGTAAATAGAATGCGCGGGCCGTCTTCCGATATACATCATTGA CTGCCATAGAGATTACAGGCTTTCTTTCGAAATGTCTTCAAAATTGCCGT AGTCAGTGTCTATCTAAAGATATTTTCGATAGCGAAGTGTAACATTGATA GACGGAGTGCTTGAGATTTTTTTGCTGTAAACGATGAAGACATCGGTAAC ACATCCATAAATCCATGTCCTTCGACAACGGACATCGATGTGCATTTGCG TAGAACCGTTGAAAATCTGTTGTACTTGAACATGGATGTCGAAAGGACGT TCAAAATCTATGTTTTGATGATGTATATCGACAACCGTTCAAAAACTGTT GTCCGCGCCAAAGGATCTCGATATTTTTCTCTCGTGGTCCATTGCAGCAA CATTAGACTATTAATCCTCCATTATTCAGGGTGTGGGTTCCGTGTTCATC TGGCTTTGTTTTAGGTGTCAGTTCGAAATCTGGCGGGCTGTACGTGCGGC CTTTTCTGCTCCGATGTTCATCTCAGAAGGGTCTTCTCTTGTTTCTTTCT GCTCCGATTTTCATCTCAGAAGGTTCGTCCTTTGTTTCTTTTCTGCTTGC GCGCGCACACAGGGCGACAACAACTGGACCCCTCTCCACTGCAGCAGCTT TCACGGCAAGCTGGAGATCGTGGAGATGCTACTGCGCAACGGCGCTGACC AGGCCGCGACGGATCTCCGAGGACGCACCTCCGCTGCGGTGTGCGACATG GGCCTCTACGACGTCGATCAGGTTAGATTGGATGATGGCGGACCAACAAT ATCTCGATGATTGCTTGGCTTGCTGTCCTTGCTTCGATTGCGTGCACCAT ATGTCTTGAGCTGGCCTCTTGTCTATCGTCTGTGTGCGGCAGCGTGGGCA GATGGGTTTGCGGGAGGTGAGGGAGAGAACGTCCGCTTGTTGTTGACTTG ACCGCGTCATTTGTTAGCGTTTGGTGACATTTGTCTTTCCAGACAATTCA AGACTGCTGTAAAGATGGTATTGGAACACGAAGTGAGGGTGGTGGACAAA CAAACGTTGTACCGCTTATGGTTAATAGACGGCCTGATGAGAAGTTTGGG CGATGTGGCTTGGTCTGTGTCCTTGCGAGAGTACACAAGGTTGCCATGTT CACCGACCTGTATCGTATTTTTTTACAAGCAGTGCGCTCGGATGGTGGCG CCGCATCCCGAGCGTTGTTTAGCGAACGCCCAACGCGTACACGATCTTTG TCCCCGTCCCCTTCCCCCCTGAACATCAGAGCGTGAAGGACAGGATTATC CAGCTCCTCAAGAACCCTCCCGTTCGGCAGCTCGAAGCACCACCCGCCGC CGCTCCGGCGACGACGATGCTCGCTCTTCCCCCTTCCTCCACGGCCCCCA CCCTCGCCGCTGCCCCCGCCGCCGCCGCTGCGGCAGGGGCCAACCCTGGC CTCCAGGGAGCGGCACCGGCGGGAAGCAGCGAGGGTGGTTCGGCCGCCGC CTCCGCTGCTTCCGCTTCCGCTGCTGCCGCCGCCGCTTCTGCGGCGTCGG CTGCCTTGGCCGCGGAGAACGGGGTGTTCGCGCTCTGGGACACGAGTCTC GGGCTCGGGGCGGGAGACGCCGTGCCAAGCGCAAGCGGCATGATCGACAA GGATTGGACGGACCCGGAGGACGCGGCGTGGAACGAGATGTGGGCGATGC TGCACGTGCCAGACCCGGACAATCCGGACAACAACCTCTACTCGGAAGTC AAGGTGTGTGTGTGTTGTGTGTTGTCCTCATCCTCCTCCATTGTTGTCGC TGCTATTGCCCTTGCGCCGTTTGGGCCGCGGAAGTTGTTATAACGTTATC ACCTACGGTACCTGTCTTTGGAACGTCGTGAGCGTTGCGTACTGGTTGGT CCCGTCGAGATCATTGCCGTGGTCTGTTATCAACTAACGAAGGGGGTATA TCATCCAATTTCCTGTGTTTTTTTACCGTCACGTCTTGTCCGCACGTTGT TGTTCATCGAGTAGTTATGGTTGATTCCATGCCGGCGGTGTGAAGCCTGA TTTGTTGGCTGCCCGCCCGCCTGCCTTTGCGTCCCGTTTTCATTCTCCCG TGATTAGAATGGTGATTTTAGAGTCAGGGCCCTTTGGCATGCCATAGATT GAATCATTGAGGATGGGCTGTTAAAATATGGAGGGTTAAGCCATGGTGGC CCCGTCTTCTATGCATTGAATTCACAGAGATTGGGCTATTAATAAGTAGA GGGTAAGCCGTACTGGCCTCCTTGACATATATTCCTACTCGCTTTAATGA ATTGAACTCATATTTGCGTTGAATGGTTTGTTTCCCTCGGATGTCTCACC CTACCCTACGGGCACGGGTGGTGGGACTGTAAATCATCGCAAACTGCCAA GAACTGCTGTCTTTTTGTGCGAACCCCCGTGCCAACACCAACGAAAAATG CCCCTCCTGAAACGACAGACCCTCCGCCACGACGTGAAGCGGCTGCGGAG CGACCTGAACGAGACCGCCAGCAATGACGCCGCCTCCGCCGCTACCACCA CCGGCGGCGCCAAAGACAGCACCACCAAAGGCGTCACCAAAGGAATCACC AAGGGCACGGCGAACCTCGAGGGACTCTTGGGCGTCTCTAGCGCTCCGGC GGCGGCATCATCATCGCCCGGCGGCGGCGCAACCTCGCCCGCTACCGCCG TAACAGACTCCCCCGCTGTCGCCCCCAAGAGCGTGACGGGATCGAGCGAA GATTCAACCACGGGGCTGTTCGGGGAAATGTCGGTGTCCGCACGAGAAGC GTTGGCGGACGGGGCGGCAGCCCCGGAGGGCGCTAGCCCGAATTCCGTCA GCGGTGGCGGCCGCCGTACTGATGGCGGGATGGTGTCGGTGCCCCCGGCC AAGCGGCATCGGTCGACGGCGGCGGCGGAGGTCGGGGGGAGTGCCGCCGA CTCGACCGGAGCGGAGGGCGCTGGGAGCATGGGGGAGACGGAGCTGAGGG AACAGCTGGAGAGACAGAACCGCTTGTTGGCCGAGATGGCCAAGGAGCTG GAGGGTCTCCGGAGGGAGAGGAGCGTGGGTGCCGTGGGGAACGGGGGGGG GGGCGTGGCGGGTATGGGAGAGGGCTCTGCCGTGCTGCCGGTAAGAAGCG GGGGAACGTGGTCGGCGGGGGCAGTAGGAATGGACATGCACTGGGCCGGA AGGTGTACGTCACCCTTTTCATTAATTTTCCACCCAACATTGTTTTTGTG AATCTCACATGCACCTCGCGTTCATCTATCGTCAGTTCTTAAGCACAGCT TCTTGTGCACTTATGGCAAAATTCCGCGTTTGATTTGTGCTTTTGCGTGG TCACGAACGCAGTCTGGGGAGAAGTGGCCCGGATCAATGTAGCTTCAAAG ATTCGGGAATTTCGCCCTCTCGGTTGCGTTGCACGGCTTGCCTGTGTTTA CGAACGTATGCATATTTGAAGCGTTGTTTTCTGCGCCAGCAGTCGAGAGG TGTGTATTTGCATGATACCACATCTTTTGAGAGCACGGCAACGGGTCGAT CTTTTGAAAGCATTGGCGAGCGGCAGGGGTGATGTGGGCTGCCTTTAAAG CGCGTTCTTATCCTCCTGCACAAACACGTTTTGTCTGTCCCCCCCCCCAC CCCTCAGGTGCTTGACGATCGAGGGCTAGCTCACAAGGTAAGGTGA
back to top

Coding sequence (CDS) from alignment at Ecto-sp13_S_contig716:1277..8022+

>mRNA_Ecto-sp13_S_contig716.18265.1 ID=mRNA_Ecto-sp13_S_contig716.18265.1|Name=mRNA_Ecto-sp13_S_contig716.18265.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1686bp|location=Sequence derived from alignment at Ecto-sp13_S_contig716:1277..8022+ (Ectocarpus species13 EcNAP12_S_4_19m)
GACGTGTACATAGTGGGGCAAGGTGACACCACCGGGATGGCGGCGGTCGG
CTTGCATTTTGTCGACCTCCACTCGGCCGCGAAACAGGATGACATGATGG
GCGTCGTGAAGCTGCTCGAGGAGGGAGCCCCAATCGACAAGAGAGACCCC
TACGGATACACCCCCCTCCACTGGGCGTGCCAGAAGGGACACACGCACAC
CGTGCAGGCACTCCTTGCCGCGGGGGCCAACGTTCATGTGCGAGACAAAT
GGAGACGCACCCCTCTGCACCGCGCTGCTAAGGAGGGCCACAAGGACGTC
GTCGCCGCGCTGCTCAACTCGGGGGCGGAAATCAACGCTCAGGGCGACAA
CAACTGGACCCCTCTCCACTGCAGCAGCTTTCACGGCAAGCTGGAGATCG
TGGAGATGCTACTGCGCAACGGCGCTGACCAGGCCGCGACGGATCTCCGA
GGACGCACCTCCGCTGCGGTGTGCGACATGGGCCTCTACGACGTCGATCA
GAGCGTGAAGGACAGGATTATCCAGCTCCTCAAGAACCCTCCCGTTCGGC
AGCTCGAAGCACCACCCGCCGCCGCTCCGGCGACGACGATGCTCGCTCTT
CCCCCTTCCTCCACGGCCCCCACCCTCGCCGCTGCCCCCGCCGCCGCCGC
TGCGGCAGGGGCCAACCCTGGCCTCCAGGGAGCGGCACCGGCGGGAAGCA
GCGAGGGTGGTTCGGCCGCCGCCTCCGCTGCTTCCGCTTCCGCTGCTGCC
GCCGCCGCTTCTGCGGCGTCGGCTGCCTTGGCCGCGGAGAACGGGGTGTT
CGCGCTCTGGGACACGAGTCTCGGGCTCGGGGCGGGAGACGCCGTGCCAA
GCGCAAGCGGCATGATCGACAAGGATTGGACGGACCCGGAGGACGCGGCG
TGGAACGAGATGTGGGCGATGCTGCACGTGCCAGACCCGGACAATCCGGA
CAACAACCTCTACTCGGAAGTCAAGACCCTCCGCCACGACGTGAAGCGGC
TGCGGAGCGACCTGAACGAGACCGCCAGCAATGACGCCGCCTCCGCCGCT
ACCACCACCGGCGGCGCCAAAGACAGCACCACCAAAGGCGTCACCAAAGG
AATCACCAAGGGCACGGCGAACCTCGAGGGACTCTTGGGCGTCTCTAGCG
CTCCGGCGGCGGCATCATCATCGCCCGGCGGCGGCGCAACCTCGCCCGCT
ACCGCCGTAACAGACTCCCCCGCTGTCGCCCCCAAGAGCGTGACGGGATC
GAGCGAAGATTCAACCACGGGGCTGTTCGGGGAAATGTCGGTGTCCGCAC
GAGAAGCGTTGGCGGACGGGGCGGCAGCCCCGGAGGGCGCTAGCCCGAAT
TCCGTCAGCGGTGGCGGCCGCCGTACTGATGGCGGGATGGTGTCGGTGCC
CCCGGCCAAGCGGCATCGGTCGACGGCGGCGGCGGAGGTCGGGGGGAGTG
CCGCCGACTCGACCGGAGCGGAGGGCGCTGGGAGCATGGGGGAGACGGAG
CTGAGGGAACAGCTGGAGAGACAGAACCGCTTGTTGGCCGAGATGGCCAA
GGAGCTGGAGGGTCTCCGGAGGGAGAGGAGCGTGGGTGCCGTGGGGAACG
GGGGGGGGGGCGTGGCGGGTATGGGAGAGGGCTCTGCCGTGCTGCCGGTG
CTTGACGATCGAGGGCTAGCTCACAAGGTAAGGTGA
back to top