prot_Ecto-sp13_S_contig7151.18259.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: D8LNZ8_ECTSI (60S ribosomal export protein NMD3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNZ8_ECTSI) HSP 1 Score: 210 bits (534), Expect = 2.070e-63 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
Query: 1 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL
Sbjct: 23 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 122
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: A0A835ZB23_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB23_9STRA) HSP 1 Score: 159 bits (401), Expect = 3.960e-44 Identity = 73/98 (74.49%), Postives = 83/98 (84.69%), Query Frame = 0
Query: 3 TILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
T+ CC+CS PI PNPT MCV CIRTQVDITEGIA T+ QCRGC R+L+P WVE LESRELMA+CLRK+SGL +VKLVDASW+WTE HSRRLK+KL
Sbjct: 18 TVACCICSAPIKPNPTHMCVQCIRTQVDITEGIALKPTIFQCRGCMRWLKPNWVEATLESRELMAICLRKVSGLNRVKLVDASWVWTEAHSRRLKLKL 115
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: A0A7R9U6W2_9STRA (60S ribosomal export protein NMD3 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6W2_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.780e-43 Identity = 66/100 (66.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query: 1 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
+P ILCC C + IPPNPT+MCV C+R++VD+TEG+ T+ ++QCR CQR+LRP W+ +LESRELMA+CLRK++GL+ VKLVDA W+WTEPHSRRL+VKL
Sbjct: 36 IPNILCCECGVSIPPNPTAMCVSCLRSKVDVTEGLTTSANVYQCRSCQRWLRPPWINAELESRELMALCLRKVNGLQGVKLVDAEWVWTEPHSRRLRVKL 135
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: A0A2J7RRM0_9NEOP (60S ribosomal export protein NMD3 n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RRM0_9NEOP) HSP 1 Score: 143 bits (360), Expect = 1.220e-40 Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 0
Query: 4 ILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPG--WVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
ILCC C PI PNP++MCV C+RTQVDITEGI T+H C+GC+RYL+P WV C LESREL+++CL+K+ GL +VKLVDA ++WTEPHS+R+KVKL
Sbjct: 17 ILCCQCGTPIEPNPSNMCVACLRTQVDITEGIPKQATLHFCKGCERYLQPPSEWVPCALESRELLSLCLKKLKGLNRVKLVDAGFVWTEPHSKRIKVKL 115
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV) HSP 1 Score: 148 bits (373), Expect = 3.490e-40 Identity = 65/100 (65.00%), Postives = 82/100 (82.00%), Query Frame = 0
Query: 1 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
+P ILCCMC++PI N +MCV C++ QVD+TEGI + MHQCRGC ++ RP WV +LESREL+A+CL+KISGL KVKLVDA W+WTEPHS+RLK+KL
Sbjct: 9 LPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKL 108
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: A0A2J7RRM1_9NEOP (60S ribosomal export protein NMD3 n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7RRM1_9NEOP) HSP 1 Score: 143 bits (360), Expect = 1.490e-39 Identity = 64/99 (64.65%), Postives = 81/99 (81.82%), Query Frame = 0
Query: 4 ILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPG--WVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
ILCC C PI PNP++MCV C+RTQVDITEGI T+H C+GC+RYL+P WV C LESREL+++CL+K+ GL +VKLVDA ++WTEPHS+R+KVKL
Sbjct: 17 ILCCQCGTPIEPNPSNMCVACLRTQVDITEGIPKQATLHFCKGCERYLQPPSEWVPCALESRELLSLCLKKLKGLNRVKLVDAGFVWTEPHSKRIKVKL 115
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.560e-39 Identity = 64/100 (64.00%), Postives = 82/100 (82.00%), Query Frame = 0
Query: 1 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
+P ILCC+C++PI N +MCV C++ QVD+TEGI + MHQCRGC ++ RP WV +LESREL+A+CL+KI+GL KVKLVDA WIWTEPHS+RLK+KL
Sbjct: 8 LPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKWSRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKL 107
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: A0A1X7T227_AMPQE (60S ribosomal export protein NMD3 n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7T227_AMPQE) HSP 1 Score: 139 bits (351), Expect = 3.250e-39 Identity = 66/102 (64.71%), Postives = 79/102 (77.45%), Query Frame = 0
Query: 1 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRP--GWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
M ILCC C I PNP +MCV C+RTQVDITEGI T++ CR C+RYL+P GWV C LESREL+A+CL+K+ GL KV LVDA +IWTEPHS+RLK+KL
Sbjct: 15 MQRILCCQCGTMIEPNPANMCVACLRTQVDITEGIPKQSTVYFCRSCERYLQPPSGWVSCSLESRELLALCLKKLKGLGKVHLVDAGFIWTEPHSKRLKIKL 116
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR) HSP 1 Score: 145 bits (365), Expect = 5.090e-39 Identity = 64/100 (64.00%), Postives = 82/100 (82.00%), Query Frame = 0
Query: 1 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
MPTILCCMC+ PI N + CV C+++QVD+TEGI + +HQCRGC R+ RP WV +LESREL+A+CL+KI+ L +VKL+DA+WIWTEPHSRRLK+KL
Sbjct: 8 MPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKL 107
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT) HSP 1 Score: 145 bits (365), Expect = 5.220e-39 Identity = 64/100 (64.00%), Postives = 82/100 (82.00%), Query Frame = 0
Query: 1 MPTILCCMCSLPIPPNPTSMCVLCIRTQVDITEGIATNLTMHQCRGCQRYLRPGWVECKLESRELMAVCLRKISGLKKVKLVDASWIWTEPHSRRLKVKL 100
MPTILCCMC+ PI N + CV C+++QVD+TEGI + +HQCRGC R+ RP WV +LESREL+A+CL+KI+ L +VKL+DA+WIWTEPHSRRLK+KL
Sbjct: 8 MPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRWSRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKL 107 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7151.18259.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig7151.18259.1 ID=prot_Ecto-sp13_S_contig7151.18259.1|Name=mRNA_Ecto-sp13_S_contig7151.18259.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=100bpback to top |