mRNA_Ecto-sp13_S_contig7134.18239.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7134.18239.1
Unique NamemRNA_Ecto-sp13_S_contig7134.18239.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: D7FXK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK6_ECTSI)

HSP 1 Score: 532 bits (1371), Expect = 4.950e-186
Identity = 256/288 (88.89%), Postives = 266/288 (92.36%), Query Frame = 1
Query:    1 RMKVLWTLLLGAAPVAFAEDSTAAEWLGDHSIQGDGLVTETGGFLQRKVSKND---SHRGPRSSPKSRPSRKRNNDGVKAEFSLEYEHIGCFADKKTDRVLEHVMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAFDLYKLNGPMPSDSREYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACGGYYAFSLFEYLD 855
            RMKVLWTLLLGAAPVAFAEDSTAA WLGDHSIQG+GLV ETG  LQRKVSK +   SH G RSS KSRP RKRNNDGVKAEFSLEYEHIGCFAD KTDRVL H+MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHS   GTDK DADLCDL+CYG +AETCGG YAFDLYKL+GPMPSDSREYVGCFADDQ DRALAN+IKFQDNMTQ VCRVYCERFGSSFYATQYGDECWCGAT+DVEEYKRHGDGEC+AGCFG+PAIACGGYYAFSLFEYLD
Sbjct:  229 RMKVLWTLLLGAAPVAFAEDSTAAVWLGDHSIQGEGLVAETGSSLQRKVSKKNEGPSHHGARSSRKSRPCRKRNNDGVKAEFSLEYEHIGCFADNKTDRVLGHLMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHS---GTDKGDADLCDLSCYGCDAETCGGLYAFDLYKLDGPMPSDSREYVGCFADDQEDRALANKIKFQDNMTQDVCRVYCERFGSSFYATQYGDECWCGATDDVEEYKRHGDGECIAGCFGDPAIACGGYYAFSLFEYLD 513          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 258 bits (659), Expect = 3.970e-76
Identity = 117/201 (58.21%), Postives = 142/201 (70.65%), Query Frame = 1
Query:  247 YEHIGCFADKKTDRVLEHVMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAFDLYKLNGPMPSDSREYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACGGYYAFSLFEY 849
            Y ++GCFAD K DRV E++  S  MT+A+C E+C  RRATYMA QYGYECWCS   E++Y RHS           +CD  C G  A+ CGGF AFDLYK+  P      EYVGCFADD+ DR L +EIK Q +MTQAVCR YCE   + FYATQYGDECWCG +ND E+YKRHG G C+AGC G+P +ACGG+ AF+LF++
Sbjct:  433 YSYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSD---------GVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKF 624          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.520e-72
Identity = 106/191 (55.50%), Postives = 130/191 (68.06%), Query Frame = 1
Query:  247 YEHIGCFADKKTDRVLEHVMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAFDLYKLNGPMPSDSREYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACG 819
            Y ++GCFAD K DRV E++  SP MT+A+C E+C  RRAT+MA Q+G ECWCS   E++Y RHS           +CD  C G   + CGGF AFDLYK+  P      EYVGCFADD+ DR L +EIK Q +MTQ VCR YCE   + FYATQYGDECWCG + D ++YKRHG G C+AGC G+P +ACG
Sbjct:   11 YSYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSD---------GVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACG 192          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: A0A6H5JN72_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JN72_9PHAE)

HSP 1 Score: 243 bits (620), Expect = 4.120e-72
Identity = 117/217 (53.92%), Postives = 140/217 (64.52%), Query Frame = 1
Query:  247 YEHIGCFADKKTDRVLEHVMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAG-TDKSDADLCDLNCYGYNAE----TCGGFYAFD------------LYKLNGPMPSDSREYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACGGYYAFSLFE 846
            Y H+GCF+D K DRVLE ++ S  MT AMC EHC  RRATYMA QYG+ECWCS  ++LDY+RHS      D  D  LC   C G        +C    A +            LYK+  P   +  EYVGCFADD  DR L NEIK+Q +MTQAVCR YCE FG+ FYATQYGDECWCG ++D E+YKRHG G CVA C G+P  ACGG+ +F+LF+
Sbjct:  451 YTHVGCFSDNKEDRVLEAMITSSAMTGAMCYEHCVDRRATYMATQYGFECWCSHDSDLDYARHSDDLERVDGRDYGLCGTRCEGDKVRILHGSCRQREALENHAMGEIRNLHYLYKITEPTEPEGEEYVGCFADDGDDRLLKNEIKYQPDMTQAVCRTYCEGFGAHFYATQYGDECWCGTSDDKEDYKRHGHGSCVAQCSGDPTTACGGFDSFNLFK 667          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: D8LED9_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED9_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 1.110e-69
Identity = 109/201 (54.23%), Postives = 135/201 (67.16%), Query Frame = 1
Query:  247 YEHIGCFADKKTDRVLEHVMKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAFDLYKLNGPMPSDSREYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACGGYYAFSLFEY 849
            Y ++GCFAD K DRV E++  S  MT+A+C E+C  RRATYMA QYG ECWCS   E +Y RHS           +CD  C G  A+ CGGF AFDLYK+  P      EYVGCFAD+  D  L  EIK Q +MTQAVCR YCE   ++FYATQ G+ECWCG + + E+Y R G G C+AGC G+PA+ACGG+ AF+LF++
Sbjct:  400 YSYVGCFADNKHDRVFEYMRTSFTMTTAVCLEYCLERRATYMATQYGIECWCSVDAETEYDRHSD---------GVCDHACGGDEADYCGGFDAFDLYKITEPREPTGDEYVGCFADNPEDWVLGGEIKSQPDMTQAVCRTYCEDLDANFYATQNGEECWCGMSEEEEDYTRSGRGSCLAGCSGDPAVACGGFNAFNLFKF 591          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 203 bits (517), Expect = 1.170e-55
Identity = 97/203 (47.78%), Postives = 132/203 (65.02%), Query Frame = 1
Query:  247 YEHIGCFADKKTDRVLEHV-MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAFDLYKLN-GPMPSDSREYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACGGYYAFSLFEY 849
            YEH+GCF D ++DRVL+   + S  MT+ +C E C  + A YMA Q+G ECWCSR   LDY RH         D  +CD  C G  +ETCGG ++F+LY+L+  P P D  EYVGC+ D++GDR L++ I   D+MT AVCR +C    + +Y TQ+  ECWCG ++D  +Y+RHG+G C   C G+  +ACGGY A+SLF+Y
Sbjct: 1145 YEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHG--------DTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDE-EYVGCYTDNKGDRVLSDMIS-SDDMTAAVCREHCADKDAPYYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKY 1337          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: A0A6H5JLD0_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLD0_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 2.480e-54
Identity = 96/203 (47.29%), Postives = 116/203 (57.14%), Query Frame = 1
Query:  304 MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAF---------------DLYKLNGPMPSDSR----EYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACGGYYAFSLFEYLD 855
            M+  L  + MC EHC    A YMA Q+G+EC CS   +LDY+RHS   GTD     LC   C G    T   +                  DLYK+  P   +      EYVGCFADD  DR L NEIK Q +MTQ VCRVYCE + + FYATQYGDECWCG +ND E+YKRHG G C+  C G+ A  CGG+ AF+L++  D
Sbjct:    1 MRVFLCRTQMCYEHCHSEGAAYMATQFGFECLCSHDADLDYARHSE--GTD----GLCMTECEGDTLPTSTSWRGRSSRRNVCLELALLFPDLYKIAEPKEVEXXXXXXEYVGCFADDPEDRLLGNEIKHQPDMTQVVCRVYCEGYDAQFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDSATVCGGFNAFNLYKNKD 197          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: D8LED5_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED5_ECTSI)

HSP 1 Score: 190 bits (482), Expect = 9.480e-54
Identity = 95/182 (52.20%), Postives = 113/182 (62.09%), Query Frame = 1
Query:  331 MCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAFDLYK-------LNGPMPSDSREYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACGGYYAFSLFEYLD 855
            MC EHC+   A YMA Q+G+ECWCS  T+LDYSRHS     D  D  LC   C G   +TC    A D          L      +  EYVGCFADD  DR L NEIK+Q +MTQAVCR YCE + + FYATQYGDECWCG +ND E+YKRHG G C+  C G+P   CGG  AF+L++ +D
Sbjct:  276 MCYEHCYSEGAAYMATQFGFECWCSDDTDLDYSRHSDNI--DGGDG-LCTTACQG---DTCWRERALDACAVLVDRRALLVEEGDEVDEYVGCFADDPEDRLLGNEIKYQPDMTQAVCRTYCEGYDAHFYATQYGDECWCGMSNDEEDYKRHGSGSCLMECSGDPGTVCGGNDAFNLYKNMD 451          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 1.930e-42
Identity = 80/202 (39.60%), Postives = 113/202 (55.94%), Query Frame = 1
Query:  247 YEHIGCFADKKTDRVLEHV-MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAFDLYKLNGPMPSDSREYVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEEYKRHGDGECVAGCFGEPAIACGGYYAFSLFEY 849
            YEH+GC+ D        H+ +    MT+ MC + C    + +M  Q G EC CSR  +L YS           D  +CD+ C G + ETCGG    DLYKL      D  EYVGC++D    R +  ++   + MT  +CR +CE   + +YATQYG+EC+CG ++D E+Y+ HG G C   C G+   ACGGY+AFSL+++
Sbjct:   44 YEHVGCYVDNGMVNARPHLPLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAF---------DFGVCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVM-EDMLVDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQF 235          
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Match: D7FQI3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI3_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 1.170e-41
Identity = 89/207 (43.00%), Postives = 115/207 (55.56%), Query Frame = 1
Query:  253 HIGCFADKKTDRVLEHVMKSPLMTSAMCAEHCFGRRA--TYMALQYGYECWCSRYTELDYSRHSRTAGTDKSDADLCDLNCYGYNAETCGGFYAFDLYKLNGPMPSDSRE--YVGCFADDQGDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGAT----NDVEEYKRHGDGECVA-GCFGEPAIACGGYYAFSLFE 846
            ++GCFAD K DRVL   M S  MT  +CA +C       TY A Q+G ECWC+R  ++DYSRH   +         CD  C G +  TCGG+ AFDL+KL     S   E  Y+GCFADD+GDR L ++I   D MT   C  +C      F+A Q+G ECWCG      +D++ Y RHG   C    C G+ +  CGGY +FSL+ 
Sbjct:  182 YVGCFADDKEDRVLGSKMSSGSMTPEVCAAYCADDSPSHTYYATQWGRECWCAR--DVDYSRHGEGS---------CDYTCTGDSGTTCGGYDAFDLFKLEEDSLSPPSEDYYLGCFADDKGDRVLEDKISASD-MTLETCEEHCTALDKPFFALQWGKECWCGGCELQDDDLDRYDRHGIASCTDYPCTGDGSRQCGGYDSFSLYN 376          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7134.18239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXK6_ECTSI4.950e-18688.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LED7_ECTSI3.970e-7658.21EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JMV6_9PHAE1.520e-7255.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN72_9PHAE4.120e-7253.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D8LED9_ECTSI1.110e-6954.23EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FRE8_ECTSI1.170e-5547.78EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JLD0_9PHAE2.480e-5447.29WSC domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LED5_ECTSI9.480e-5452.20EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LGP4_ECTSI1.930e-4239.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQI3_ECTSI1.170e-4143.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7134contigEcto-sp13_S_contig7134:4..4061 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score258.5
Seed ortholog evalue3.8e-66
Seed eggNOG ortholog2880.D8LED7
Model size855
KEGG koko:K01315
KEGG Pathwayko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
Hectar predicted targeting categorysignal peptide
Exons8
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
EC3.4.21.7
Cds size852
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002,ko04147,ko04516
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7134.18239.1prot_Ecto-sp13_S_contig7134.18239.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7134 4..4058 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463978.981313-CDS-Ecto-sp13_S_contig7134:3..411681463978.981313-CDS-Ecto-sp13_S_contig7134:3..41Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7134 4..41 -
1681463979.0029233-CDS-Ecto-sp13_S_contig7134:541..6501681463979.0029233-CDS-Ecto-sp13_S_contig7134:541..650Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7134 542..650 -
1681463979.0154285-CDS-Ecto-sp13_S_contig7134:985..11611681463979.0154285-CDS-Ecto-sp13_S_contig7134:985..1161Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7134 986..1161 -
1681463979.02502-CDS-Ecto-sp13_S_contig7134:1482..15131681463979.02502-CDS-Ecto-sp13_S_contig7134:1482..1513Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7134 1483..1513 -
1681463979.0349348-CDS-Ecto-sp13_S_contig7134:2044..22151681463979.0349348-CDS-Ecto-sp13_S_contig7134:2044..2215Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7134 2045..2215 -
1681463979.044947-CDS-Ecto-sp13_S_contig7134:2555..26541681463979.044947-CDS-Ecto-sp13_S_contig7134:2555..2654Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7134 2556..2654 -
1681463979.055018-CDS-Ecto-sp13_S_contig7134:3039..31711681463979.055018-CDS-Ecto-sp13_S_contig7134:3039..3171Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7134 3040..3171 -
1681463979.0653343-CDS-Ecto-sp13_S_contig7134:3962..40581681463979.0653343-CDS-Ecto-sp13_S_contig7134:3962..4058Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7134 3963..4058 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463979.075518-UTR-Ecto-sp13_S_contig7134:4058..40611681463979.075518-UTR-Ecto-sp13_S_contig7134:4058..4061Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7134 4059..4061 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7134.18239.1

>prot_Ecto-sp13_S_contig7134.18239.1 ID=prot_Ecto-sp13_S_contig7134.18239.1|Name=mRNA_Ecto-sp13_S_contig7134.18239.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=284bp
MKVLWTLLLGAAPVAFAEDSTAAEWLGDHSIQGDGLVTETGGFLQRKVSK
NDSHRGPRSSPKSRPSRKRNNDGVKAEFSLEYEHIGCFADKKTDRVLEHV
MKSPLMTSAMCAEHCFGRRATYMALQYGYECWCSRYTELDYSRHSRTAGT
DKSDADLCDLNCYGYNAETCGGFYAFDLYKLNGPMPSDSREYVGCFADDQ
GDRALANEIKFQDNMTQAVCRVYCERFGSSFYATQYGDECWCGATNDVEE
YKRHGDGECVAGCFGEPAIACGGYYAFSLFEYLD
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mRNA from alignment at Ecto-sp13_S_contig7134:4..4061-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7134.18239.1 ID=mRNA_Ecto-sp13_S_contig7134.18239.1|Name=mRNA_Ecto-sp13_S_contig7134.18239.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4058bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7134:4..4061- (Ectocarpus species13 EcNAP12_S_4_19m)
AGGATGAAGGTGCTTTGGACCCTTCTTCTCGGCGCGGCTCCCGTCGCATT TGCGGAAGATTCGACGGCAGCTGAATGGCTGGGCGACCACTCAATTCAGG TGCCTTCCGTGTTCCCGACGTCTGAGAGACATGAACAAGGACCCGGCAGA GGGGAGTCTACAGTAGTCGTCATTCGCTTTCATGTATCGTGTGTGTGTGC TCGCCCGCGCGCGCGTGCGCTCATACAGACAGGCCAAGGCCAGCGTGCCC AACGGGATTGTTGGTGTCGAAGTTACATCAAGAGCAGAACCGGCTTGTGT TTCCTCTGGTCCCGACAAGGAAGGTTCAGGATGTGGGTTCGTTGATGGTC TCTTACATCTCTCTACCGCATAGATAGGCTCGTTGATGGTCTCTTGCATC TCTCTTCAGCAGTAGTTCGTCTGCATCATGCAATTTTTTACAGTAGTACA GCATTTACATCTACACTCGAGGTGTTCTTCTCGTCGTTCTTGATCACTCA TCGACAGGAGTCCTCCTGCCCGAAGGCAGGCGACCCATGATGTTTCTGCT CGCCTACAGTGCGGTCATTTCGGCGACATGTCCTGGAAGCAGAACATAGT CACCACCAGTTGGCTCCCCATAGTCTGTAGATATAAAAATACGAACCGCA CGCAAAAGAACAGAAAAAGCTCACGTATTGCAACAACAGTCGAATGCAAG TCAAAGGACGTGCTCCTGCCTATGCCGACAAAACCCGATACTGCACGTTA CATTTTAGCTCAAGTCCATAAACTCCAATGGGCTACGTACAGGCTCCCAC CCTGCGGTCCCCTTCCCCTCCCCCTTGATCTCTCAGATTCGTCCCTTGTT TCTACATACGAAATAGTCCTACATTACGGTTGTTATGCAGGGCGACGGGC TGGTCACTGAGACTGGAGGCTTTCTCCAACGGAAAGTCTCTAAAAATGAT TCACATCGCGGCCCTCGCTCCAGCCCCAAATCTCGCCCAAGCCGAAAGCG CAACAACGACGGGGTCAAGGCGGTACGTACGTTGTGCACTCCAGACCAGG ACGGCTCCGGACTAGCCCAAACAACCATTAGCGGGTGCGGCGTGTAGGTT GTGGCAAGCGCATTTATTTCCCAATTCTCATCCGAAGGGGTGTTTATTGT GGGGCTCGATGTGGCTGCTATACGCTGTCAACTACTGATAATGCGTTTCA TTCCTCTTGTACATGGCAGTGCTGCTGCGCGTGTTATTCCTGCACTGGAC GTGTTTCTACACTTCGTGGAGTATCAGATAGTCGGTACTGTGGGTGACCT TTGCCGACAAACGATTATGACTGTTTTATTGTTCTTTTTCACTCTTTTTT TTGCGGCGTTTTGCCTTACCTCCTTCATAATATTATATTACCACGACCGC TCTCCAGGAATTCTCCCTCGAGTATGAGCACATCGGATGCTTTGCTGACA AGAAAACGGACCGGGTGCTCGAACACGTGATGAAGTCGCCTCTTATGACG AGCGCTGTGAGTGGCCCCCTTCGCTGCTTGGGGTTGTTGGCGAAACCAGC CGAATTTCATACACGTGTATCGGTATTGTTTTCGTTCAAAATGCGTATCC TGCAGCAGAATGAATGGCGGCATCAAACCCCGACGTCACTGCGCGCCCCT GACCCGCACAACGTGCTTAATTAAGCTGCCTTCGGCGGAGGGTTCGCTGC GCGGCATTTCTGACCTAAAACGACCAGCCTCTTTGGGTATATAGTGTGCC TATTCAATATATGGCAGGCCACGGCGAGCTGCGTCGTGTTCGTGCGGCCA GCGATGTATGTTCAAATGCTCCCCTGCCCCACACTCGCACATACAGATGT GCGCCGAGCACTGCTTCGGAAGACGCGCCACCTACATGGCCCTTCAGTAC GGGTATGAATGCTGGTGCAGCCGGTACACGGAGCTTGACTATTCTCGCCA CTCTAGGACGGCTGGGACGGACAAGAGCGACGCGGACCTATGCGACCTTA ACTGCTACGGATATAACGTACGTGCGTCATTTGCGAGAAATACTCTAACG CGCTGGCGGGTATCATAGACTCTTTGGTACGCTCCCATCTCCAAACCACT GTAGCGAGGATAACGAAATTACATGAAAATATCAATGGAGCAAACTACTG TACACAGGCAGACTTGGGTTAGCCGATTCCCCGAGTAAAAAAAATGACTG CTCTCTGCTAATATTCTCTGCTTCCTTCCGGCCCTATTGAATACTTCCCC CGCAAGATTTCTGTACTTTTGGGGCGTTGGCTTGCGCGGCATGGGGGCGG GGTGGGAGCAGGTGGACGTGGTTGAGTATCGTCGTATGCATCAGAAAGAG TTGTCTGGAGGGTAGTTTCCCCCGGAACATGTTGTTAATGCCCTCATTGA TGAGCGCCTGGAGATTAGGTCGGCCAATCCATGCATGAACAAATTGGTTC CCGATTCGTACAATCTACAGATCACCGTTTTTCAACCCGTCTCGATGTCA CACTTCCTCTGCTCCCTCCCTGGTTTTCGTATCTCCCTTCCCCATTAGGC CGAGACTTGCGGAGGATTCTATGCATTCGGTAAGCCCCGCTGCTCTGTCG CTGCGTACTATTAGTGGGTGTTTCCATTGTTTCAGACTACAAGGTACTAC CGTACTGTAGTACACTTCTCTGGTCTTGAGGTTTTGGTGCGTTTTTCTTC TTTTCCGACGTCAAAAAAAGTTGGCGCAGTATTTCTGCACCTGGTGCGCA GTCGAACGAGGCTGGAGCCAATTCAATGCAATACAAGGTAACCATTGTGC ACTGAGCACACAGCTTTTTTGGTATGCCACATGTATTCTCATTTACTGTT CGTTCGTGTGCTACCATTTTTTTGTTGTGTTTTTTCGTTTTTTGGTCCAG ACCTTTACAAACTCAACGGCCCAATGCCGTCCGACAGTCGCGAGTATGTA GGCTGCTTCGCAGACGACCAGGGGGACAGGGCACTGGCAAACGAGATAAA GTTCCAGGACAACATGACCCAGGCCGTCTGCCGCGTCTACTGCGAAAGGT TCGGCTCGAGCTTCTACGCCACTCAGGTGAGAGGGATGTGTAAAAGAAGC ACACGCACGAACGACGAGGGTTGTTGTTGCGTTCATCGTGTGCGTGCGCG TATACGCTTGGGCTGAGTGCATTCTGCGCAGTCTTCCGCTGAGTTGAGAT GCAGCGCGCATTGAGAATATCATCGCCGTGTTCCTCTTGCATCGCCGCCC GGAGGCAGTTGACCAAACAGCAGAAACGCGGGCTTGAAACTTGGAATTCT TGTTGGTATCGGTGTCGGTGCTTGGTGCAACGTCGTCGCTAGCTGTAGCT TATCTTCTTGGCTTTTCGCCCGCCTACTCTTCCTGCCGCCGTCTCACGTA ACACGATAAAGTACGGAGATGAGTGCTGGTGTGGTGCGACCAACGACGTC GAGGAGTACAAACGGCACGGGGACGGCGAGTGCGTCGCCGGCTGTTTCGG AGAACCGGCAATAGCTTGTGGTGAGCGACGAATTAAAAGGGAGAGGGAAG AGACGGAAGTACGAAACCCAGGGACGGAGCGGCCGGCAGGAAGACGAGAG CCGGAAAGAGAGGGAGAGAGAGCGAACGGTAGCCTACCAGCCGGCCAGCC ATAGAGGGCATAGCGGTCCTCGAATCAATAGCGCGGTAGCAGCACATTGT GAACCTTGGTAAATATCCGATGAGCTTCCCATTCTGCACCCTCCTCTCCG TCCCCACTTTTTTCTTCACATGCATCCTATCAAAAATGCCACCCAATCGT TCCCTACGCTCTCTCATGTAGAGGGTATTTCGTCCACAAACACGATGTTT GTGTCACTTCACGTACCTCAGCATTTCGAAAGGTTGCGCACGCAATTCCC GCTCGCCTTTACTTTTCCCAACAAAAATCGCGAGCAGGACACTTCCTCAC GGATTCGGATCTTGTTCACTGAAACACAGACTGAAGTGTAGCCCCCCGGT GCTCACCCCGATCGCCCCAGGCGGATACTACGCCTTCAGTCTGTTCGAGT ACTTGGAC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7134:4..4061-

>mRNA_Ecto-sp13_S_contig7134.18239.1 ID=mRNA_Ecto-sp13_S_contig7134.18239.1|Name=mRNA_Ecto-sp13_S_contig7134.18239.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=852bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7134:4..4061- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAAGGTGCTTTGGACCCTTCTTCTCGGCGCGGCTCCCGTCGCATTTGC
GGAAGATTCGACGGCAGCTGAATGGCTGGGCGACCACTCAATTCAGGGCG
ACGGGCTGGTCACTGAGACTGGAGGCTTTCTCCAACGGAAAGTCTCTAAA
AATGATTCACATCGCGGCCCTCGCTCCAGCCCCAAATCTCGCCCAAGCCG
AAAGCGCAACAACGACGGGGTCAAGGCGGAATTCTCCCTCGAGTATGAGC
ACATCGGATGCTTTGCTGACAAGAAAACGGACCGGGTGCTCGAACACGTG
ATGAAGTCGCCTCTTATGACGAGCGCTATGTGCGCCGAGCACTGCTTCGG
AAGACGCGCCACCTACATGGCCCTTCAGTACGGGTATGAATGCTGGTGCA
GCCGGTACACGGAGCTTGACTATTCTCGCCACTCTAGGACGGCTGGGACG
GACAAGAGCGACGCGGACCTATGCGACCTTAACTGCTACGGATATAACGC
CGAGACTTGCGGAGGATTCTATGCATTCGACCTTTACAAACTCAACGGCC
CAATGCCGTCCGACAGTCGCGAGTATGTAGGCTGCTTCGCAGACGACCAG
GGGGACAGGGCACTGGCAAACGAGATAAAGTTCCAGGACAACATGACCCA
GGCCGTCTGCCGCGTCTACTGCGAAAGGTTCGGCTCGAGCTTCTACGCCA
CTCAGTACGGAGATGAGTGCTGGTGTGGTGCGACCAACGACGTCGAGGAG
TACAAACGGCACGGGGACGGCGAGTGCGTCGCCGGCTGTTTCGGAGAACC
GGCAATAGCTTGTGGCGGATACTACGCCTTCAGTCTGTTCGAGTACTTGG
AC
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