prot_Ecto-sp13_S_contig70959.18183.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: D7FSG2_ECTSI (WD-repeat protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSG2_ECTSI) HSP 1 Score: 205 bits (522), Expect = 2.390e-61 Identity = 103/104 (99.04%), Postives = 103/104 (99.04%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPT GQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV
Sbjct: 151 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTTGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 254
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: A0A091N3D6_9PASS (DNA excision repair protein ERCC-8 (Fragment) n=2 Tax=Acanthisitta chloris TaxID=57068 RepID=A0A091N3D6_9PASS) HSP 1 Score: 117 bits (293), Expect = 2.980e-29 Identity = 58/104 (55.77%), Postives = 75/104 (72.12%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YP DTG+F S + D +KVWDTNTL + F F++ VYS MSP +H LIAVG+ SP+ +LCD++SG+ +H L GH +AV A +WSPR EF+LATGSAD V
Sbjct: 83 YPHDTGMFTSSSFDKTLKVWDTNTLQLADTFHFQETVYSHHMSPIATKHCLIAVGTKSPKVQLCDLKSGSSSHILQGHRQAVLAVSWSPRHEFILATGSADGKV 186
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: A0A8B9FYU3_9PSIT (ERCC excision repair 8, CSA ubiquitin ligase complex subunit n=1 Tax=Amazona collaria TaxID=241587 RepID=A0A8B9FYU3_9PSIT) HSP 1 Score: 116 bits (291), Expect = 5.410e-29 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YP DTG+F S + D +K+WDTNTL F FK VYS MSP H L+AVG+ SP+ +LCD++SG+F+H L GH + V A AWSPR E++LATGSAD V
Sbjct: 50 YPHDTGMFTSSSFDKTLKIWDTNTLKSADAFHFKGTVYSHHMSPVATNHCLVAVGTKSPKVQLCDLKSGSFSHILQGHRQEVLAVAWSPRHEYVLATGSADGRV 153
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: UPI0010A8561E (DNA excision repair protein ERCC-8 isoform X2 n=1 Tax=Ornithorhynchus anatinus TaxID=9258 RepID=UPI0010A8561E) HSP 1 Score: 116 bits (290), Expect = 7.920e-29 Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YP DTG+F S + D +K+WDTNTL EF F+ VYS MSP +H LIAVG+ SP+ +LCD++SG+ +H L GH + + A +WSPRSE++LATGSAD V
Sbjct: 80 YPHDTGIFTSSSFDKTLKIWDTNTLQPADEFHFEGTVYSHHMSPIATKHCLIAVGTKSPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRSEYILATGSADSRV 183
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: A0A0Q3PY90_AMAAE (DNA excision repair protein ERCC-8 n=7 Tax=Psittaciformes TaxID=9223 RepID=A0A0Q3PY90_AMAAE) HSP 1 Score: 116 bits (291), Expect = 8.360e-29 Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YP DTG+F S + D +K+WDTNTL F FK VYS MSP H L+AVG+ SP+ +LCD++SG+F+H L GH + V A AWSPR E++LATGSAD V
Sbjct: 108 YPHDTGMFTSSSFDKTLKIWDTNTLKSADAFHFKGTVYSHHMSPVATNHCLVAVGTKSPKVQLCDLKSGSFSHILQGHRQEVLAVAWSPRHEYVLATGSADGRV 211
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: Q0JHK7_ORYSJ (Os01g0857900 protein n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q0JHK7_ORYSJ) HSP 1 Score: 110 bits (276), Expect = 1.040e-28 Identity = 55/104 (52.88%), Postives = 68/104 (65.38%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YPVDTGLFV+ + D VKVWDTN+ VV++F KVYSA+MSP H LIA GS Q LCDI SGAF H LSGH + + + WS SE++L +G D +
Sbjct: 5 YPVDTGLFVTASFDQYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVHLCDIASGAFTHTLSGHRDGIMSLEWSTSSEWILMSGGCDGAI 108
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: A0A453FYU7_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453FYU7_AEGTS) HSP 1 Score: 113 bits (283), Expect = 1.260e-28 Identity = 56/104 (53.85%), Postives = 69/104 (66.35%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YPVDTGLFV+ + D VKVWDTN+ VV++F KVYSA+MSP H LIA GS Q RLCDI SGAF H LSGH + + + WS SE++L +G D +
Sbjct: 104 YPVDTGLFVTASFDNYVKVWDTNSTQVVMDFKMPGKVYSAAMSPIATTHMLIATGSADVQVRLCDIASGAFTHTLSGHHDGIMSLEWSTSSEWILMSGGCDGAI 207
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: A0A2P2LJE2_RHIMU (WD-repeat protein n=3 Tax=Rhizophora mucronata TaxID=61149 RepID=A0A2P2LJE2_RHIMU) HSP 1 Score: 113 bits (283), Expect = 1.730e-28 Identity = 54/104 (51.92%), Postives = 69/104 (66.35%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YP+DTGLFV+G+ D VK+WDTNT +V+ F KVY +MSP H LIA G++ Q RLCDI SGAF+H LSGH + V + WS SE++L TG D +
Sbjct: 112 YPIDTGLFVTGSYDHTVKIWDTNTTQMVMNFKLPGKVYKTAMSPLSTSHMLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLVTGGCDGAI 215
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: A0A6I8NHV3_ORNAN (ERCC excision repair 8, CSA ubiquitin ligase complex subunit n=5 Tax=Monotremata TaxID=9255 RepID=A0A6I8NHV3_ORNAN) HSP 1 Score: 116 bits (290), Expect = 1.880e-28 Identity = 56/104 (53.85%), Postives = 74/104 (71.15%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YP DTG+F S + D +K+WDTNTL EF F+ VYS MSP +H LIAVG+ SP+ +LCD++SG+ +H L GH + + A +WSPRSE++LATGSAD V
Sbjct: 146 YPHDTGIFTSSSFDKTLKIWDTNTLQPADEFHFEGTVYSHHMSPIATKHCLIAVGTKSPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRSEYILATGSADSRV 249
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Match: A0A7K8W6D5_9FURN (ERCC8 protein (Fragment) n=4 Tax=Neognathae TaxID=8825 RepID=A0A7K8W6D5_9FURN) HSP 1 Score: 112 bits (281), Expect = 2.150e-28 Identity = 56/104 (53.85%), Postives = 73/104 (70.19%), Query Frame = 0
Query: 8 YPVDTGLFVSGAMDGVVKVWDTNTLGVVLEFDFKDKVYSASMSPTIGQHHLIAVGSDSPQARLCDIRSGAFAHALSGHSEAVSACAWSPRSEFLLATGSADQTV 111
YP DTG+F S + D +K+WDTNTL F F+ VYS MSP +H LIAVG+ SP+ +LCD++SG+ +H L GH +AV A +WSPR E++LATGSAD V
Sbjct: 83 YPHDTGMFTSSSFDKTLKIWDTNTLQPADIFHFEGTVYSHHMSPVATKHCLIAVGTKSPKVQLCDLKSGSSSHILQGHRQAVLAVSWSPRHEYVLATGSADGKV 186 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70959.18183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_Ecto-sp13_S_contig70959.18183.1 ID=prot_Ecto-sp13_S_contig70959.18183.1|Name=mRNA_Ecto-sp13_S_contig70959.18183.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=113bpback to top |