mRNA_Ecto-sp13_S_contig70611.18134.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: D7FJS7_ECTSI (MAP kinase phosphatase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS7_ECTSI) HSP 1 Score: 165 bits (418), Expect = 1.110e-48 Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 1
Query: 1 FMYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ 234
FMY+AFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ
Sbjct: 96 FMYKAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ 173
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: A0A6H5L2L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L8_9PHAE) HSP 1 Score: 167 bits (422), Expect = 2.540e-46 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1
Query: 1 FMYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ 234
FMYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ
Sbjct: 216 FMYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ 293
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: A0A7S4DF41_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DF41_HETAK) HSP 1 Score: 99.4 bits (246), Expect = 1.340e-24 Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 1 FMYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRR 231
FMYQAFDF++ A RGR LVHCV+GVSRSC LA A+LM + + YD+A VR R + +PN GF C LLEWQ+ R
Sbjct: 100 FMYQAFDFIEGARRARGRCLVHCVEGVSRSCALAAAYLMWRQTLPYDQALQAVRAARGVASPNIGFACQLLEWQKLR 176
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: A0A7S2V0L7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0L7_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.260e-24 Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 1
Query: 1 FMYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRR 231
F+YQ+FDF+++ E GRVLVHCV+GVSRSCT+ IA++ML +GV + EAY VR R +C+PN FI +LL WQ+ R
Sbjct: 147 FLYQSFDFIESCREAGGRVLVHCVEGVSRSCTVCIAYVMLHRGVKFPEAYEYVRHARNVCSPNAAFIAALLSWQKMR 223
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: I0YS19_COCSC (MAP kinase phosphatase 1 (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YS19_COCSC) HSP 1 Score: 86.7 bits (213), Expect = 9.600e-20 Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 4 MYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRR 231
+Y FDF++AA GRVL+HC QGVSRS TLAIA+LM + +DE V+ R + PN GF C LL WQRRR
Sbjct: 34 LYNVFDFIEAARLNGGRVLLHCSQGVSRSATLAIAYLMWKRSRPFDEVLTSVKAIRGVANPNIGFTCQLLNWQRRR 109
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: A0A250XQD1_9CHLO (Uncharacterized protein n=2 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XQD1_9CHLO) HSP 1 Score: 91.3 bits (225), Expect = 1.030e-19 Identity = 40/77 (51.95%), Postives = 54/77 (70.13%), Query Frame = 1
Query: 4 MYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ 234
+Y A +F+ +A + GRVLVHC QGVSRS T+ IA+LM G YDE + +V++ R + PN GF C LL+WQ+RRQ
Sbjct: 149 LYDALEFIDSALKAGGRVLVHCSQGVSRSATIVIAYLMWKTGGSYDEVFAKVKEARGVANPNIGFTCQLLQWQKRRQ 225
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: A0A059LEA0_9CHLO (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LEA0_9CHLO) HSP 1 Score: 88.2 bits (217), Expect = 2.640e-19 Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 4 MYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRR 231
+Y FDF++ A + GRVL+HC QGVSRS TLA+AW+M T+ Y+E + V+ R I PN GF+C L++W +R+
Sbjct: 142 LYDVFDFIRGALDGGGRVLIHCSQGVSRSVTLAVAWIMWTRRACYEEVFEDVKLHRGIANPNIGFVCQLMQWSKRQ 217
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: E1ZFD5_CHLVA (Uncharacterized protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZFD5_CHLVA) HSP 1 Score: 85.1 bits (209), Expect = 4.030e-19 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 4 MYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRR 231
+Y FDF++ A + GRVL+HC QGVSRS +LAIA+LM + YD+ +L V+ R + PN GFIC LL+W +RR
Sbjct: 34 LYDVFDFIEEAT-RGGRVLIHCSQGVSRSASLAIAYLMWRQAAVYDDVFLAVKAARGVTNPNIGFICQLLQWHKRR 108
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: A0A7S2WVL7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVL7_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.900e-19 Identity = 38/78 (48.72%), Postives = 57/78 (73.08%), Query Frame = 1
Query: 1 FMYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ 234
F+YQ D + + G+VLVHCVQGVSRSC L+IA+ M ++ Y +A+ V++ RPIC+PN FIC+L+EW+++R+
Sbjct: 278 FVYQVIDVIDQVRQAGGKVLVHCVQGVSRSCALSIAYSMWSQKFSYRDAFDFVKRCRPICSPNIAFICNLVEWEKQRK 355
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Match: A0A2P6VKG1_9CHLO (Tyrosine-phosphatase MKP1-like n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VKG1_9CHLO) HSP 1 Score: 89.0 bits (219), Expect = 6.590e-19 Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = 1
Query: 4 MYQAFDFMKAAEE---------QRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLRVRQGRPICAPNTGFICSLLEWQRRRQ 234
+Y FDF++AA GRVLVHC QGVSRS +LAIA+LM +G YD+A+ V+ R + PN GFIC LL+W +RRQ
Sbjct: 149 LYDVFDFIEAATSGAGGGAAGTSPGRVLVHCSQGVSRSASLAIAYLMWKRGTPYDDAFQEVKASRGVANPNIGFICQLLQWYKRRQ 234 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig70611.18134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig70611.18134.1 >prot_Ecto-sp13_S_contig70611.18134.1 ID=prot_Ecto-sp13_S_contig70611.18134.1|Name=mRNA_Ecto-sp13_S_contig70611.18134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=77bp MYQAFDFMKAAEEQRGRVLVHCVQGVSRSCTLAIAWLMLTKGVDYDEAYLback to top mRNA from alignment at Ecto-sp13_S_contig70611:173..697- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig70611.18134.1 ID=mRNA_Ecto-sp13_S_contig70611.18134.1|Name=mRNA_Ecto-sp13_S_contig70611.18134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=525bp|location=Sequence derived from alignment at Ecto-sp13_S_contig70611:173..697- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig70611:173..697- >mRNA_Ecto-sp13_S_contig70611.18134.1 ID=mRNA_Ecto-sp13_S_contig70611.18134.1|Name=mRNA_Ecto-sp13_S_contig70611.18134.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=231bp|location=Sequence derived from alignment at Ecto-sp13_S_contig70611:173..697- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |