prot_Ecto-sp13_S_contig12132.1812.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig12132.1812.1
Unique Nameprot_Ecto-sp13_S_contig12132.1812.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length362
Homology
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BLAST of mRNA_Ecto-sp13_S_contig12132.1812.1 vs. uniprot
Match: D8LQD1_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQD1_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 8.840e-49
Identity = 89/100 (89.00%), Postives = 91/100 (91.00%), Query Frame = 0 
Query:  245 MPRAPPPLPEHTTAHSTPQTSHLWSSPSCGSSGGRCRTRTSPPTSWKEVTSTSRLSDCSRSARTTMIPPKPRRRFFSSRVRLLSRPPTMAPPTASWSKPL 344
            MPRAPPPL   TTAH+TPQTSHLW SPSCGSSGGRCRTRTSPPTSWKEV STSRLSDCSRSARTTM PPKPRR FFSS VRLLSRPPT APPTASWS+PL
Sbjct:    1 MPRAPPPLSGQTTAHNTPQTSHLWPSPSCGSSGGRCRTRTSPPTSWKEVASTSRLSDCSRSARTTMTPPKPRRSFFSSGVRLLSRPPTKAPPTASWSRPL 100
[Close]
BLAST of mRNA_Ecto-sp13_S_contig12132.1812.1 vs. uniprot
Match: D8LQE0_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQE0_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.610e-38
Identity = 121/202 (59.90%), Postives = 125/202 (61.88%), Query Frame = 0 
Query:   10 SAIGTAAATASPTAAPATDADAYHTTNAPISATIPVFAELTEGMNGTDLGLTTATTXXXXXXXEEGI--TNPRDTLAGS-PEVLAAAADAAADPAIVPTGPLVPGTTTTSAEAENTTTHPSSDPAASAIDKNVADPLNGSDDIASQEEPTAAAPAAAPRRLRHRRQGQYYHN------RCLKNYWAVGSHQSTDGSNSNATG 202
            SAIGTAAATA  TAA  TDADAYHTTN PISATIPV AELTEGMNG DLGLTTA  XXXXXXX       +PRDTLAGS             DPAIVPTGPLVPGTT  S E E+TTT   SDPAAS ID NV D  NGS D AS+EEPTAA                             K    VGSHQ+TDGSNSNA G
Sbjct:   55 SAIGTAAATAPTTAAIVTDADAYHTTNTPISATIPVVAELTEGMNGADLGLTTAIXXXXXXXXXXXXXXADPRDTLAGSFAXXXXXXXXXXXDPAIVPTGPLVPGTTANSTEPESTTTLSRSDPAASVIDSNVVDRFNGSGDTASREEPTAAXXXXXXXXXXXXXXXXXXXKVTTSTTDASKTIGHVGSHQNTDGSNSNANG 256
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig12132.1812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQD1_ECTSI8.840e-4989.00PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
D8LQE0_ECTSI1.610e-3859.90PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig12132contigEcto-sp13_S_contig12132:829..5088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig12132.1812.1mRNA_Ecto-sp13_S_contig12132.1812.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig12132 691..5168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig12132.1812.1 ID=prot_Ecto-sp13_S_contig12132.1812.1|Name=mRNA_Ecto-sp13_S_contig12132.1812.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=362bp
MVPTETKEESAIGTAAATASPTAAPATDADAYHTTNAPISATIPVFAELT
EGMNGTDLGLTTATTTTATTTTEEGITNPRDTLAGSPEVLAAAADAAADP
AIVPTGPLVPGTTTTSAEAENTTTHPSSDPAASAIDKNVADPLNGSDDIA
SQEEPTAAAPAAAPRRLRHRRQGQYYHNRCLKNYWAVGSHQSTDGSNSNA
TGIMVVHRMLVQVTAVGAAQIPLRLMLRRSCPKSRPSFPAPWHKMPRAPP
PLPEHTTAHSTPQTSHLWSSPSCGSSGGRCRTRTSPPTSWKEVTSTSRLS
DCSRSARTTMIPPKPRRRFFSSRVRLLSRPPTMAPPTASWSKPLRVCGRS
VLPTPRTGMPG*
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