mRNA_Ecto-sp13_S_contig7047.18114.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: D7FKU0_ECTSI (Putative serine rich protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKU0_ECTSI) HSP 1 Score: 162 bits (409), Expect = 6.010e-45 Identity = 74/75 (98.67%), Postives = 74/75 (98.67%), Query Frame = 1
Query: 1 PVATEPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLAN 225
PVATEPTEC GKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLAN
Sbjct: 121 PVATEPTECHGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLAN 195
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: A0A017T4U7_9DELT (Putative secreted protein n=2 Tax=Chondromyces apiculatus TaxID=51 RepID=A0A017T4U7_9DELT) HSP 1 Score: 70.1 bits (170), Expect = 1.960e-12 Identity = 30/74 (40.54%), Postives = 43/74 (58.11%), Query Frame = 1
Query: 1 PVATEPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLA 222
P ++ PT C KRGV++ + D+ AL+PG+SWWYNW+ A + G +Y+PM+WG LD R A
Sbjct: 77 PPSSHPTGC--KRGVAYGYHSTADMQALSPGVSWWYNWTHVPDEGVRPDAYETLGVDYVPMVWGGDGLDGARAA 148
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: A0A1G1TJI2_9BACT (Glyco_hydro_cc domain-containing protein n=1 Tax=Hymenobacter coccineus TaxID=1908235 RepID=A0A1G1TJI2_9BACT) HSP 1 Score: 67.8 bits (164), Expect = 2.570e-12 Identity = 34/75 (45.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 1 PVATEPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRLAN 225
P T+ KRGV++DF A DL ALAPG+SWWY W+P I + V G E++PM W E ST AN
Sbjct: 25 PAPTQAQTKSPKRGVAYDFTSAADLQALAPGLSWWYGWAP-IPKAAVANTYQGLGSEFVPMQWDEILDGSTVTAN 98
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: H8H0W5_DEIGI (F5/8 type C domain-containing protein n=2 Tax=Deinococcus TaxID=1298 RepID=H8H0W5_DEIGI) HSP 1 Score: 69.3 bits (168), Expect = 4.560e-12 Identity = 28/62 (45.16%), Postives = 40/62 (64.52%), Query Frame = 1
Query: 4 VATEPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIW 189
+ + T KRG+++D A DL ALAPG+SWWYNWSPA + A S+ G +++PM+W
Sbjct: 35 LTAQATAKSAKRGLAYDLATAPDLAALAPGVSWWYNWSPAPNGGAPQNAASTYGMDFVPMVW 96
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: A0A4Q5XY15_9DELT (Glyco_hydro_cc domain-containing protein n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5XY15_9DELT) HSP 1 Score: 67.8 bits (164), Expect = 1.010e-11 Identity = 28/60 (46.67%), Postives = 37/60 (61.67%), Query Frame = 1
Query: 13 EPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWG 192
+P KRG+++ + ADDL AL+PGMSWWYNWSP A + S S ++PM WG
Sbjct: 28 DPATKSAKRGIAYGYHSADDLKALSPGMSWWYNWSPRPEAGAASVYTSES-VSFVPMAWG 86
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: A0A250IPT7_9DELT (Carbohydrate-binding protein n=1 Tax=Melittangium boletus DSM 14713 TaxID=1294270 RepID=A0A250IPT7_9DELT) HSP 1 Score: 68.2 bits (165), Expect = 1.150e-11 Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 34 KRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWG 192
KRG+ + + A+D+ AL+PGMSWWYNWSP A +A SS G ++PM+WG
Sbjct: 34 KRGLGYGYHSAEDMRALSPGMSWWYNWSPTPEAGAASVA-SSVGVSFVPMVWG 85
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: A0A1H0RAM0_9RALS (Glycosyl hydrolase catalytic core n=5 Tax=Burkholderiaceae TaxID=119060 RepID=A0A1H0RAM0_9RALS) HSP 1 Score: 67.8 bits (164), Expect = 1.220e-11 Identity = 27/73 (36.99%), Postives = 43/73 (58.90%), Query Frame = 1
Query: 1 PVATEPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRL 219
P +T KRG+++D D+ ALAPG+SWWYNWSP AS +++ G +++PM+W + D+ +
Sbjct: 57 PSSTPGVTKSAKRGIAYDLASKADVAALAPGVSWWYNWSPRPSASAPTDPRAAYGMDFVPMLWNDYAFDAATV 129
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: A0A439EYP3_9BURK (Glyco_hydro_cc domain-containing protein n=1 Tax=Cupriavidus sp. UYMSc13B TaxID=1774746 RepID=A0A439EYP3_9BURK) HSP 1 Score: 66.2 bits (160), Expect = 3.210e-11 Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 PVATEPTECQG-KRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEK 198
P A+ P + KRGV++D A D ALAPG+SWWYNW+ AS A ++ G +YIPM+W ++
Sbjct: 6 PPASSPLGSKSAKRGVAYDLASAADFAALAPGVSWWYNWASQPNASAPADATAAYGMDYIPMLWNDQ 72
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: UPI000AF5ACF6 (glycoside hydrolase family protein n=2 Tax=unclassified Cupriavidus TaxID=2640874 RepID=UPI000AF5ACF6) HSP 1 Score: 66.6 bits (161), Expect = 3.220e-11 Identity = 26/73 (35.62%), Postives = 42/73 (57.53%), Query Frame = 1
Query: 1 PVATEPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIWGEKDLDSTRL 219
P AT KRG+++D D+ ALAPG+SWWYNWSP + +++ G +++PM+W + D+ +
Sbjct: 57 PAATPGVTKSAKRGIAYDLATTADVAALAPGVSWWYNWSPRPSPTAPVDTRTAYGMDFVPMLWNDYAFDAATV 129
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Match: A0A1W1UGF4_9DEIO (F5/8 type C domain-containing protein n=1 Tax=Deinococcus hopiensis KR-140 TaxID=695939 RepID=A0A1W1UGF4_9DEIO) HSP 1 Score: 65.9 bits (159), Expect = 7.630e-11 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 1 PVATEPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAQSSSGCEYIPMIW 189
P AT P KRG+++D A DL ALAPG+SWWYNW + A + A S+ G +++PM+W
Sbjct: 37 PQATGPKSA--KRGIAYDLSTAADLAALAPGVSWWYNWGSSPNAGAPQDAGSTYGMDFVPMLW 97 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7047.18114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7047.18114.1 >prot_Ecto-sp13_S_contig7047.18114.1 ID=prot_Ecto-sp13_S_contig7047.18114.1|Name=mRNA_Ecto-sp13_S_contig7047.18114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp PVATEPTECQGKRGVSFDFKDADDLDALAPGMSWWYNWSPAIIASEVKIAback to top mRNA from alignment at Ecto-sp13_S_contig7047:7005..7784+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7047.18114.1 ID=mRNA_Ecto-sp13_S_contig7047.18114.1|Name=mRNA_Ecto-sp13_S_contig7047.18114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=780bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7047:7005..7784+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7047:7005..7784+ >mRNA_Ecto-sp13_S_contig7047.18114.1 ID=mRNA_Ecto-sp13_S_contig7047.18114.1|Name=mRNA_Ecto-sp13_S_contig7047.18114.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7047:7005..7784+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |