mRNA_Ecto-sp13_S_contig7046.18111.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI) HSP 1 Score: 535 bits (1377), Expect = 1.210e-184 Identity = 313/328 (95.43%), Postives = 315/328 (96.04%), Query Frame = 1
Query: 70 MSEDADMKDAPEGVKAEEAEPMEKEAKNGDDMIPXXXXXXXXXXXXXASSGSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKTLL 1053
MSEDADMKDAPEGVKAEEAEP EKEAKNGDD + XXXXXXXXXXXXX SGSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEA+RRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGA XXXXX PPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEE SAVDRRAVETFSTMKNLAINSSQF DDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGV WHP AYSSDKTLL
Sbjct: 1 MSEDADMKDAPEGVKAEEAEPKEKEAKNGDDKMXXXXXXXXXXXXXXXXSGSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEADRRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAAXXXXX---PPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVTWHPEAYSSDKTLL 325
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A835YL38_9STRA (Quinon protein alcohol dehydrogenase-like superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL38_9STRA) HSP 1 Score: 210 bits (535), Expect = 4.260e-59 Identity = 128/270 (47.41%), Postives = 168/270 (62.22%), Query Frame = 1
Query: 220 GSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAA 1029
G+ A++ A +GNINIH TE+M+LS S+E Q +HA +L++VEA RRARTM VPT E+VA+ LR+LGQP+RLFSE +AD+RERLR +A +++ E + ++A EPA A K EVVYT A+ L+EAR IA+ SF A RLA AKRRR ASA D A + +K L IN S GD+RPLSA++VSPDG VAS +W+ + KLW++++L V RGH ER+TGVAWHP A
Sbjct: 28 GASAVEKARASGNINIHDIAQTEVMELSAASREEQDKHAEMLRKVEAHRRARTMAVPTLPEEVARALRRLGQPIRLFSETLADVRERLREHLAQLQLDGEGDAAVASLLA------------AAEPAKAAAAAVEEG-------KAEVVYTVAAAPLIEAREVIASYSFAAAPQRLARAKRRRLDSAVASAEDAAAAAACTRLKGLVINVSAVGDERPLSAVRVSPDGSLVASAAWSGVAKLWNMKDLRPCGVFRGHKERLTGVAWHPRA 278
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A7S2WFU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFU9_9STRA) HSP 1 Score: 195 bits (495), Expect = 7.560e-54 Identity = 124/275 (45.09%), Postives = 164/275 (59.64%), Query Frame = 1
Query: 223 SDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRG---HSERVTGVAWHPAAYSS 1038
S A++AAV+AGNINI + E+++LS S + Q HA LL++VEAERRAR++VVPT E+V ++LR +GQPVRLF EN+ADIRERLR FIA + Q+ G+ A G P A +K VY+ AS L+EAR I S R+AG KRRR + EE + VD A ET+ M+ LAI++SQF D+RPL A + +P VAS S +KLWD E+LE + +L G H+ER TG+AWHP A+ S
Sbjct: 17 SAALQAAVRAGNINIAEGGKMEVLELSATSLDEQDRHAVLLRRVEAERRARSIVVPTNPEEVRQQLRSIGQPVRLFGENLADIRERLREFIA-------------------------RRQLDGDEAPGMLTEPMEEDKPKAPEKKADVYSEASADLVEARQRIFDYSSTHTVERMAGVKRRRESAEERARVDESAKETYKDMRALAISASQFADERPLGACRCAPHADVVASASLAPYIKLWDTESLESKGILGGPGAHTERATGLAWHPQAFGS 266
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A2P4X876_9STRA (U4/U6 small nuclear ribonucleoprotein Prp4 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X876_9STRA) HSP 1 Score: 174 bits (440), Expect = 7.850e-47 Identity = 111/284 (39.08%), Postives = 171/284 (60.21%), Query Frame = 1
Query: 211 ASSGSDA--IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIA--TMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 1047
+SSG A ++AA++AGN+N+ TE+++LSE S+ AQ++HA+LL+++EAE+RAR + VPT E+V ++LRQLG+P+ LF E AD RERLR ++ E+E EE + ++A +++ G + A ++ ++ Y P ++ L ARAAI T + A+ + +R+ E A VD+ A E ++T +A +SQ GD RPL++++ S DG VA+GSW+ LVK+WD + KV RGH +RVTGVAWHP S+ T
Sbjct: 28 SSSGRMASNLEAAIRAGNVNVSDNVETEVLELSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHQVLA---DIQKQEVGTGAGESGAATREERRAGRYTKPQEDQLFYVPIKNEKLKSARAAIFAHTTTVVGARLKRERQERQMSAEERARTVDQHAAELYATALKMANIASQNGDVRPLASVRFSADGNHVATGSWSSLVKVWDASSANEVKVFRGHEDRVTGVAWHPNNVFSEMT 308
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: W2R6V2_PHYPN (SFM domain-containing protein n=14 Tax=Phytophthora TaxID=4783 RepID=W2R6V2_PHYPN) HSP 1 Score: 177 bits (448), Expect = 9.210e-47 Identity = 112/278 (40.29%), Postives = 166/278 (59.71%), Query Frame = 1
Query: 223 SDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIATMSFGRAKSRLAGAKR--RRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 1047
S ++AA++AGN+N+ TE++ LSE S+ AQ++HA+LL+++EAE+RAR + VPT E+V ++LRQLG+P+ LF E AD RERLR ++ E+E EE + ++A + Q G AAGA P ++ ++ Y P ++AL RA I + +RL ++ R E A +D A E ++T +A +SQ GD RPL++++ S DG VA+GSW+ LVK+WD N KV RGH +RVTGVAWHP + S+ T
Sbjct: 34 SSNLEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTIVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEETGFVHEVLADI------QRQDAGAGAAGAEGAARKATKP---QEDQLFYVPIKNEALKGVRATIFAHTASVVGTRLKRERQEQRMSLEERARTIDHHAAELYATALKMANVASQNGDVRPLASVRYSADGAHVATGSWSSLVKIWDATNANEVKVFRGHEDRVTGVAWHPTSAFSEMT 302
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A3R7GQX6_9STRA (SFM domain-containing protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GQX6_9STRA) HSP 1 Score: 177 bits (450), Expect = 5.540e-46 Identity = 115/277 (41.52%), Postives = 167/277 (60.29%), Query Frame = 1
Query: 232 IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAP--KPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIA--TMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 1047
++ A++AGN+N+ TE++ LSE S+ AQ++HA+LL+++EAE+RAR + VPT E+V ++LRQLG+P+ LF E AD RERLR ++ E+E EE + ++A K VP GGE AG P ++ E+ Y P +D L + RAAI T S A+ + +++ E A VD A E ++T +A +SQ GD RPL++++ S DG VA+GSW+ LVK+WD N KV RGH +RVTGVAWHP+ S+ T
Sbjct: 40 LETAMRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLRGILSQLELEAEETGFVHQVLADIQKQGAVPG----GGETIAGETGAEADQSDKP--QEDELFYVPIKNDQLKKVRAAIFDHTTSIVGARLKRERQEKQMSEEERARTVDHHAAELYATTLRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWDATNAAEIKVFRGHEDRVTGVAWHPSNTFSEMT 310
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A662XLR5_9STRA (SFM domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLR5_9STRA) HSP 1 Score: 175 bits (443), Expect = 5.820e-46 Identity = 121/279 (43.37%), Postives = 172/279 (61.65%), Query Frame = 1
Query: 232 IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAG--AXXXXXXXXXPPAAKKVE--VVYTPASDALLE-ARAAIATMSFGRAKSRLAGAKRRR--GTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 1047
++AA++AGN+N+ TE++ LSE S+ AQ++HA+LL+++EAE+RAR + VPT ++V ++LRQLG+PV LF E AD RERLR ++ E+E EE + ++A + G P AG A XXXXXXXX K E + Y P + L+ ARAAI S +RL ++ + E AVDR A E ++T +A +SQ GD RPL++++ SPDG VA+GSW+ LVK+WD + KV RGH +RVTG+AWHP S+ T
Sbjct: 43 LEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVDEVIRRLRQLGEPVTLFGERPADRRERLRELLSRLELEAEETGFVHQVLADI-------QKQGSAPGAGEEAAXXXXXXXXXXXXKPQEDQLFYVPIKNVELKNARAAIFAHSVSAGSARLKRERQEKQLSAEERTRAVDRHAAELYATAAKMANIASQNGDVRPLASVRYSPDGAHVATGSWSSLVKVWDATSAVEVKVFRGHEDRVTGLAWHPTNVFSEMT 314
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: G4ZDF0_PHYSP (SFM domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=G4ZDF0_PHYSP) HSP 1 Score: 172 bits (435), Expect = 7.340e-45 Identity = 109/276 (39.49%), Postives = 165/276 (59.78%), Query Frame = 1
Query: 232 IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAG-AXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIA--TMSFGRAKSRLAGAKRRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 1047
++AA++AGN+N+ TE++ LSE S+ AQ++HA+LL+++EAE+RAR + VPT E+V ++LRQLG+P+ LF E AD RERLR ++ E+E EE G V + + ++ G PA G A ++ ++ Y P +D L ARAA+ T S A+ + +++ E A +D A E ++T +A +SQ GD RPL++++ S DG VA+GSW+ LVK+WD N KV RGH +RV+ VAWHP+ S+ T
Sbjct: 37 LEAAIRAGNVNVSDNVETEVLQLSESSRAAQEKHAQLLRRIEAEKRARNIAVPTSVEEVIRRLRQLGEPITLFGERPADRRERLREILSRLELEAEET----GFVHQVLADIQKQDGGAGAPAEGTAAGDEGAAGQASKPQEDQLFYVPIKNDGLKTARAAVFAHTTSVVGARLKRERQEKQMSAEERARTMDHHAAELYATALRMANIASQNGDVRPLASVRYSADGAHVATGSWSSLVKVWDANNAAEVKVFRGHEDRVSAVAWHPSNTFSEMT 308
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: A0A3M6VKG6_9STRA (SFM domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKG6_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.020e-44 Identity = 115/282 (40.78%), Postives = 166/282 (58.87%), Query Frame = 1
Query: 232 IKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAP--KPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTPA-SDALLEARAAIATMSFGRAKSRLAGAK-------RRRGTPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 1047
++AA++AGN+N+ TE+++LSE S+ Q++HA LL+++EAE+RAR +VVPT E V ++LRQLG+P+ LF E AD RERLR ++ E+E+EE + ++A + F G E AG ++ ++ Y P +D L RAAI F A SR+ GA+ R R E A VD A E ++T +A +SQ GD RPLS+++ S DG VA+GSW+ LVK+WD + KV RGH +R+TGVAWHP+ S+ T
Sbjct: 37 LEAAIRAGNVNVSDNVETEVLELSESSRAVQEKHAHLLRRIEAEKRARNIVVPTIVEVVIRRLRQLGEPITLFGERPADRRERLREILSRLELEEEETGFVHQVLADIQQQGF---GADAGVEKTAGRGETALDNVTK--LEENQLFYVPIQNDRLKNVRAAI----FSHA-SRVVGARLKRERQERNRSPEERARTVDHHAAELYTTALKMANIASQNGDVRPLSSVRYSADGAHVATGSWSSLVKIWDATSANEVKVFRGHEDRITGVAWHPSYTLSEMT 308
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Match: M4B2G3_HYAAE (SFM domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B2G3_HYAAE) HSP 1 Score: 171 bits (433), Expect = 1.370e-44 Identity = 111/282 (39.36%), Postives = 164/282 (58.16%), Query Frame = 1
Query: 211 ASSGSDAIKAAVKAGNINIHQQEHTEIMDLSEESKEAQQEHARLLKQVEAERRARTMVVPTKTEDVAKKLRQLGQPVRLFSENVADIRERLRRFIAASEMEDEEAEKIEGMVAPKPSFVPRKMQMGGEPAAGAXXXXXXXXXPPAAKKVEVVYTP-ASDALLEARAAIATMSFGRAKSRLAGAKRRRG--TPEEASAVDRRAVETFSTMKNLAINSSQFGDDRPLSAIQVSPDGGTVASGSWTCLVKLWDIENLEMRKVLRGHSERVTGVAWHPAAYSSDKT 1047
AS+ + + + A++ GN+N+ TE+++LSE S+ AQ++HA+LL++VEAE+RAR + VPT E+V +KLRQLG+P+ LF E AD RERLR ++ ++E EE + + G E AAGA A + ++ Y P ++ + + RA I + +RL ++ R E A VD+ A +S + +A +SQ GD RP+SA++ S DGG VA+GSW+ LVK+WD N KV RGH +RVTGVAWHP S+ T
Sbjct: 27 ASTVNASGEVAIRVGNVNVSDAVETEVLELSESSRAAQEKHAQLLRRVEAEKRARNVAVPTVVEEVIRKLRQLGEPITLFGERPADRRERLREILSRLDVEAEENGYVRQVFGDIEKQEIAADAAGDERAAGAGETATGKLS--RAHESQLFYVPLTNEKMKKVRATIFAHASSATGARLKRERQERSMSAEERARTVDQYAAGLYSAAQKMANVASQNGDVRPISAVRFSADGGHVATGSWSSLVKVWDATNANEVKVFRGHEDRVTGVAWHPTKAFSEMT 306 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7046.18111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7046.18111.1 >prot_Ecto-sp13_S_contig7046.18111.1 ID=prot_Ecto-sp13_S_contig7046.18111.1|Name=mRNA_Ecto-sp13_S_contig7046.18111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=388bp HRPRWTATHCTASQLFHDHRATAMSEDADMKDAPEGVKAEEAEPMEKEAKback to top mRNA from alignment at Ecto-sp13_S_contig7046:2..6065- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7046.18111.1 ID=mRNA_Ecto-sp13_S_contig7046.18111.1|Name=mRNA_Ecto-sp13_S_contig7046.18111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6064bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7046:2..6065- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7046:2..6065- >mRNA_Ecto-sp13_S_contig7046.18111.1 ID=mRNA_Ecto-sp13_S_contig7046.18111.1|Name=mRNA_Ecto-sp13_S_contig7046.18111.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1164bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7046:2..6065- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |