mRNA_Ecto-sp13_S_contig7043.18107.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: Q8QNB7_ESV1K (EsV-1-168 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNB7_ESV1K) HSP 1 Score: 324 bits (830), Expect = 5.210e-112 Identity = 151/166 (90.96%), Postives = 156/166 (93.98%), Query Frame = 1
Query: 1 MFNELVKFIPGINKHLFPKTTSAVHDGTRHVLTQDALTYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKKVDWD 498
MFNELVKFIP INKH FPK +AVHDGTR VL ++ LTYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWTD SGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVI+GEFVTIRKPGNEKYGRALCDLQTDTL SVSEYM+ADPDICRPYDGGKKV WD
Sbjct: 1 MFNELVKFIPAINKHFFPKKNTAVHDGTRCVLAEEELTYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWTDRSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVISGEFVTIRKPGNEKYGRALCDLQTDTLASVSEYMIADPDICRPYDGGKKVSWD 166
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: D8LPI6_ECTSI (EsV-1-168 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI6_ECTSI) HSP 1 Score: 261 bits (666), Expect = 4.390e-87 Identity = 127/166 (76.51%), Postives = 136/166 (81.93%), Query Frame = 1
Query: 1 MFNELVKFIPGINKHLFPKTTSAVHDGTRHVLTQDALTYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKKVDWD 498
MF+ELVKFI INK + +AV GT + L YEECEPFLPLRDGDVVFCPSCYDGDSFRLTW D G KSRIMGRL GVDTPE+ GSSDKEK LALRAKQRLSDVIAGEFVTIR PGNEKYGRALCDLQT L SVS+YMLADP+ICRPYDGG+K+ WD
Sbjct: 1 MFDELVKFISAINK-----SGTAVPLGTLRASAAEELAYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWIDGLGCKSRIMGRLAGVDTPEMNGSSDKEKVLALRAKQRLSDVIAGEFVTIRTPGNEKYGRALCDLQTAKLASVSDYMLADPEICRPYDGGRKLSWD 161
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: B5LWN7_9PHYC (Putative nuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWN7_9PHYC) HSP 1 Score: 139 bits (351), Expect = 2.220e-39 Identity = 62/138 (44.93%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 82 TRHVLTQDALTYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKKVDW 495
T + + L + EC +LP+ +GD+VF YDGD+ L W D++G R R+ +DTPE+RG S +E+ +A AK+RL I +FVT+ +P ++KYGR L DL T+++ SVS YML PDIC+ Y GGKK W
Sbjct: 2 TGGIKMSEPLCFRECVRYLPVHEGDIVFVCRVYDGDTCTLAWVDHAGRSVRSSCRIRDIDTPEMRGKSPEERKMASLAKERLQSAILEKFVTVWRPSSDKYGRILADLSTESIRSVSTYMLEMPDICKSYTGGKKTPW 139
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: Q6XLT1_9PHYC (FirrV-1-P2 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT1_9PHYC) HSP 1 Score: 134 bits (337), Expect = 2.040e-37 Identity = 59/132 (44.70%), Postives = 87/132 (65.91%), Query Frame = 1
Query: 91 VLTQDALTYEECEPFLPLRDGDVVFCPSCYDGDSFRLTWTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKK 486
+LT ++EC P++PL DGDVV+ YDGD+ + W D+ G K R+ R+ +DTPE+R S E+ LA++A+ +L D + + VTI+ P ++KYGR L DLQTD SV+++ML+ D+CRPY KK
Sbjct: 3 ILTTQTFEFQECLPYVPLEDGDVVYVCKVYDGDTCTVAWIDHRGKKVRMSCRIRDIDTPEMRDKSVHERELAVQARDKLRDAVLHQHVTIKNPSSDKYGRILADLQTDHAPSVAQHMLSLTDLCRPYKKKKK 134
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: A0A6C0DME7_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DME7_9ZZZZ) HSP 1 Score: 80.5 bits (197), Expect = 6.060e-16 Identity = 53/155 (34.19%), Postives = 82/155 (52.90%), Query Frame = 1
Query: 52 PKTTSAVHDGTRHVLTQDALTYEECEPFLP-LRDGDVVFCPSCYDGDSFRLT--WTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKK---VDWD 498
P + + + T +++ Y + PF+P + G V+ YDGD+ + + G R RLLG+D+PEI+G + KEK LA+ ++ LS +I G+ V +R EKYGR L D+ L ++E+ML + PYDGG K +WD
Sbjct: 20 PNKENLIIENTEITKYLNSIGYSDTLPFVPPINFGKVI---KVYDGDTITIAARLPNTLGPIYRFSVRLLGIDSPEIKGKTFKEKELAVISRDILSQLIMGKIVYLRNVSMEKYGRILADVYLGDL-HINEWMLKNG-YAIPYDGGTKHRPPEWD 169
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: A0A6C0F345_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0F345_9ZZZZ) HSP 1 Score: 76.3 bits (186), Expect = 1.600e-14 Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 103 DALTYEECEPFLP-LRDGDVVFCPSCYDGDSF----RLTWTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKK---VDW 495
D T+ PF+P + G V+ YDGD+ +L + + Y+ + RLLG+D+PEI+G SD EKALA +++ LS++I + V ++ EKYGR L ++ + L V+++ML D YDGG K VDW
Sbjct: 20 DDATWANTLPFVPPVTCGRVI---KVYDGDTITVASKLPFRNSPIYRFSV--RLLGIDSPEIKGHSDAEKALAKKSRDALSELIFEKNVVLKDVSTEKYGRLLANVYINDL-HVNKWML-DNKYAVEYDGGTKTRPVDW 151
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: Q2SKK0_HAHCH (Micrococcal nuclease-like protein n=5 Tax=Hahella TaxID=158481 RepID=Q2SKK0_HAHCH) HSP 1 Score: 75.9 bits (185), Expect = 2.050e-14 Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = 1
Query: 157 VVFCPSCYDGDSFRLTWTDYSGYKSRIMG-RLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAG-EFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKKVDW 495
V S YDGD+FR D+ + +G R+ +DTPE+RGS KEKALAL+AKQ L + + + V + +KY R L D+ D S+ + ++ + + PY+GG K+DW
Sbjct: 33 VAQVTSIYDGDTFRADIADWPAIVGQRIGVRIKHIDTPELRGSCKKEKALALKAKQFLVEKLRNAKQVKLENIQRDKYFRVLADVVADG-ESLGQSLIKEK-LAVPYEGGTKIDW 145
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: A0A6C0HI73_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0HI73_9ZZZZ) HSP 1 Score: 74.7 bits (182), Expect = 8.150e-14 Identity = 47/132 (35.61%), Postives = 73/132 (55.30%), Query Frame = 1
Query: 109 LTYEECEPFLP-LRDGDVVFCPSCYDGDSF----RLTWTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKKV 489
++Y+ PF+P + G V+ YDGD+ RL ++ + Y RI RL G+DTPEI+G + KEK LA + + L + + V ++ +EKYGR L D+ D V ++E+M+ R Y GG K+
Sbjct: 33 ISYDNTVPFVPPVTYGKVI---KVYDGDTITIAARLPYSKSAIY--RIAVRLNGIDTPEIKGQTQKEKDLAKKIRDTLQTKLMNKIVQLKNTSSEKYGRLLADVYLDG-VCINEWMVEQGYAVR-YHGGTKI 157
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: A0A6C0DSF6_9ZZZZ (TNase-like domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSF6_9ZZZZ) HSP 1 Score: 70.9 bits (172), Expect = 4.160e-12 Identity = 44/120 (36.67%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 139 PLRDGDVVFCPSCYDGDSF----RLTWTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVIAGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKK 486
P+ +G V+ YDGD+ +L + + Y+ + RL G+DTPEI+G +D EKA A A++ L ++I + VT++ EKYGR L D+ VS++++ML D + Y+GG K
Sbjct: 65 PITEGFVI---KVYDGDTITVASKLPYPNSPVYRFHV--RLNGIDTPEIKGKTDDEKAAAHHAQKALENLILHKTVTLKNLKTEKYGRILADVYLKK-VSLNKWML-DNNYAVKYEGGTK 177
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Match: UPI001B4BFAD0 (thermonuclease family protein n=1 Tax=Bathymodiolus japonicus methanotrophic gill symbiont TaxID=113269 RepID=UPI001B4BFAD0) HSP 1 Score: 69.3 bits (168), Expect = 5.070e-12 Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 1
Query: 178 YDGDSFRLT---WTDYSGYKSRIMGRLLGVDTPEIRGSSDKEKALALRAKQRLSDVI-AGEFVTIRKPGNEKYGRALCDLQTDTLVSVSEYMLADPDICRPYDGGKKVDW 495
YDGDSFR W D G I R+LGVDTPE+RG ++EK +A +AKQ ++ AG + + KY R L ++ D S+ + +L++ + R YDGGK+ W
Sbjct: 30 YDGDSFRADINDWADIIGKSVPI--RILGVDTPEMRGKCEQEKFIARQAKQHAVALLRAGRVIELTNIQRGKYFRILANVIIDG-ESLGDSLLSNG-LARAYDGGKRAGW 135 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7043.18107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig7043.18107.1 >prot_Ecto-sp13_S_contig7043.18107.1 ID=prot_Ecto-sp13_S_contig7043.18107.1|Name=mRNA_Ecto-sp13_S_contig7043.18107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=167bp MFNELVKFIPGINKHLFPKTTSAVHDGTRHVLTQDALTYEECEPFLPLRDback to top mRNA from alignment at Ecto-sp13_S_contig7043:6883..7383+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig7043.18107.1 ID=mRNA_Ecto-sp13_S_contig7043.18107.1|Name=mRNA_Ecto-sp13_S_contig7043.18107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7043:6883..7383+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7043:6883..7383+ >mRNA_Ecto-sp13_S_contig7043.18107.1 ID=mRNA_Ecto-sp13_S_contig7043.18107.1|Name=mRNA_Ecto-sp13_S_contig7043.18107.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=501bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7043:6883..7383+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |