mRNA_Ecto-sp13_S_contig7043.18102.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig7043.18102.1
Unique NamemRNA_Ecto-sp13_S_contig7043.18102.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: Q8QKV3_ESV1K (EsV-1-163 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QKV3_ESV1K)

HSP 1 Score: 437 bits (1123), Expect = 1.040e-153
Identity = 216/254 (85.04%), Postives = 228/254 (89.76%), Query Frame = 1
Query:    1 SMLGLAKSLLLLLTTGLHCGHASLAVTTPEEDLVVVSGRTFTVRWNQ--AGSTSSRFAIDLYQYQSPYQLQHTSYSYSMDEDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVEDGSFGCSDKFTLTTEEAASKNADTYFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFTSDCGTYVTGLCDQCKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVVD 756
            +MLGLAKS+LLLLT+GLHCGHASL VTTPEEDLVVVSGRTFTVRWNQ    +T SRFAIDLYQYQ          SY+MDEDSCG+WVT+LCPYGERGCPDSTGDYDVVLPEPATDLPDS YRIGVLGVEDGSFGCSDKFTLTTE+A SK+ D YFL VTAP DGDVAVIG TY+VQF YENGVGSSAD+FDIDLFTSDCGTYV GLCDQCKDSGGSHPI IPMDTDADFYRIRVARVEDPFLFDCSGVF+VVD
Sbjct:    9 NMLGLAKSILLLLTSGLHCGHASLTVTTPEEDLVVVSGRTFTVRWNQDDGSTTYSRFAIDLYQYQ----------SYAMDEDSCGSWVTALCPYGERGCPDSTGDYDVVLPEPATDLPDSTYRIGVLGVEDGSFGCSDKFTLTTEQATSKDPDKYFLSVTAPADGDVAVIGDTYEVQFSYENGVGSSADVFDIDLFTSDCGTYVAGLCDQCKDSGGSHPIIIPMDTDADFYRIRVARVEDPFLFDCSGVFEVVD 252          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: D8LPI2_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPI2_ECTSI)

HSP 1 Score: 403 bits (1036), Expect = 3.940e-140
Identity = 205/257 (79.77%), Postives = 215/257 (83.66%), Query Frame = 1
Query:    1 SMLGLAKSLLLLLTTGLHCGHASLAVTTPEEDLVVVSGRTFTVRWNQ---AGSTSSRFAIDLYQYQSPYQLQHTSYSYSMDEDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVEDGSFGCSDKFTLTTEEAASKNADTYFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFTSDCGTYVTGLCDQCKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVVDEF 762
            +ML LAKS+LLLLTTGLH G ASL VTTPEEDLVVVSGRTFTVRWNQ     +T  RFAIDLYQYQ          SYSMDEDSCGTW T+LCPYGE GC DSTGDYDVVLPEPA DL DSAYRIGVLGVEDGSFGCSDKF L TE AA  ++D YFL VTAP DGDVAV G  YDVQFD+ENGVGSSAD+FDIDLFTSDCGTYV GLC+QCKDSGGSH I IP DTDADFYRIRVAR EDPFLFDCSGVF+VVDEF
Sbjct:    9 NMLCLAKSILLLLTTGLHSGRASLTVTTPEEDLVVVSGRTFTVRWNQDDDGSTTPGRFAIDLYQYQ----------SYSMDEDSCGTWATALCPYGESGCLDSTGDYDVVLPEPAPDLSDSAYRIGVLGVEDGSFGCSDKFFLITEGAAPTDSDKYFLEVTAPADGDVAVTGHAYDVQFDFENGVGSSADVFDIDLFTSDCGTYVAGLCEQCKDSGGSHSISIPTDTDADFYRIRVARAEDPFLFDCSGVFEVVDEF 255          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: D7FYL2_ECTSI (EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYL2_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 1.090e-66
Identity = 119/240 (49.58%), Postives = 153/240 (63.75%), Query Frame = 1
Query:   67 SLAVTTPEEDLVVVSGRTFTVRWNQAGSTSSRFAIDLYQYQSPYQLQHTSYSYSMDEDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVED-GSFGCSDKFTL-TTEEAASKNADT-YFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFTSD----CGTYVTGLCDQ----CKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVV 753
            +L V TP  DL+VV+ RT+TV W   G+ S RF IDLY         H   S  M EDSCG WVT+LCPYGE GCPD+ GDYD+V+PEP +   +S Y++ V+ V D  S  CSD F L  +E+A    +++ YFL VT+P +GD A  G  Y V+FDY+NGVGS  D F IDL+ +D    CGTYVT +CD+    CKDS G + + IP DT+A  Y+IRV R ED  L+ CSG F ++
Sbjct:   19 ALEVVTPSADLIVVADRTYTVEWT--GADSGRFEIDLY---------HCG-SMCM-EDSCGDWVTALCPYGEEGCPDNEGDYDIVMPEPMSGESNSGYKVRVMDVSDEDSMDCSDAFYLMASEDAPDAGSESGYFLTVTSPAEGDSAEAGEEYTVEFDYDNGVGSKVDRFSIDLYMADGDGDCGTYVTSICDKPSIGCKDSMGDYDVEIPADTEAGDYKIRVGRFEDEELYGCSGTFTIM 245          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: A0A6H5JY62_9PHAE (GPI-anchored domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY62_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 7.960e-61
Identity = 113/245 (46.12%), Postives = 145/245 (59.18%), Query Frame = 1
Query:   46 GLHCGHASLAVTTPEEDLVVVSGRTFTVRWNQAGSTSSRFAIDLYQYQSPYQLQHTSYSYSMDEDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVEDGS-FGCSDKFTLTTEEAASKNADT-YFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLF----TSDCGTYVTGLCDQ----CKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKV 750
            G+     +L V +P+  + V++ R +TV W   G+T+ RF IDLY             S+ MD D CG WVT+LCPYG  GCPDS GDYD+++PEP +    S Y++ V   ED S  GCSD FTL   E A +  +  Y L VT+P DGD A+ G  Y V++DYENG GSS D F +DL+    T DCGTYVT LCDQ    C DS G + + IP DT A  Y IRV   +D  ++DCS  F+V
Sbjct:   12 GMLSAANALEVVSPDGGISVLADRAYTVEWT--GTTTGRFEIDLYYCN----------SFCMD-DVCGDWVTALCPYGADGCPDSAGDYDIIMPEPMSGTS-SGYKVMVKNAEDESDMGCSDDFTLIASEDAPEAGEMGYSLTVTSPSDGDTAMAGEVYTVEWDYENGFGSSTDRFALDLYLVGGTGDCGTYVTTLCDQPSIGCPDSQGDYDVEIPSDTPAGMYSIRVGVFDDEMMYDCSDTFEV 242          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: A0A6H5JRG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG9_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.900e-59
Identity = 114/250 (45.60%), Postives = 148/250 (59.20%), Query Frame = 1
Query:   37 LTTGLHCGHASLAVTTPEEDLVVVSGRTFTVRWNQAGSTSSRFAIDLYQYQSPYQLQHTSYSYSMD-EDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVEDGSFG-CSDKFTL--TTEEAASKNADTYFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFTSD----CGTYVTGLCDQ----CKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKV 750
            L  G+     +L V+TP + L V++ RT+TV W    S+ +RF IDLY            Y  SM  ED CG WVT+LCPYGE GCPD+ GDYD+V+PEP      S Y++ V  + D     CSD+F L  ++E  +  + D   L VT+P  GD+A     Y V+FDY+NGVGSS D F IDL+ +D    CGTYV  +CD+    CKDS G + + IP DTDA  Y+IRVAR ED  L+ CSG F +
Sbjct:    9 LACGMLGAANALKVSTPSKGLTVIADRTYTVEWTGT-SSDNRFEIDLY------------YCGSMCMEDDCGDWVTALCPYGEDGCPDNEGDYDIVMPEPMLGTSGSGYKVRVWDIHDEEDADCSDEFYLLASSEAPSVGDEDGPTLEVTSPASGDLATTCGEYTVEFDYDNGVGSSVDRFAIDLYRADGEGDCGTYVQSICDKPTIGCKDSMGDYDVEIPCDTDAGEYKIRVARFEDDSLYSCSGTFTI 245          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: D7G3F0_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F0_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 2.340e-57
Identity = 112/260 (43.08%), Postives = 147/260 (56.54%), Query Frame = 1
Query:   13 LAKSLLLLLTTGLHCGHASLAVTTPEEDLVVVSGRTFTVRWNQAGSTSSRFAIDLYQYQSPYQLQHTSYSYSMDEDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVED-GSFGCSDKFTLTTEEAASKNADT-YFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLF-----TSDCGTYVTGLCDQ----CKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVVDE 759
            +A++    L  G+     +L V +P   + V++ RT+TV W   G++ SRF IDLY             S+ M ED CG WVT+LCPYG  GCPD+ GDYD+V+PEP      S Y++ V    D  S GCS  FTL     A    +  Y L VT+P DGD A+ G  Y V++DYENG+GSS D F IDL+     T DCGTYV  LCD+    C DS G + + IP DT A  Y +RV    D  +FDCS  F++V++
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGISVIADRTYTVEWT--GTSDSRFEIDLYY----------CGSFCM-EDECGDWVTALCPYGADGCPDTQGDYDIVMPEPMAGTS-SGYKVVVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVTSPSDGDTAMAGGVYTVEWDYENGLGSSTDRFAIDLYSYGTGTGDCGTYVATLCDKPSIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDDMMFDCSEGFEIVND 246          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: D8LI46_ECTSI (EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI46_ECTSI)

HSP 1 Score: 187 bits (474), Expect = 5.560e-55
Identity = 105/242 (43.39%), Postives = 142/242 (58.68%), Query Frame = 1
Query:   64 ASLAVTTPEEDLVVVSGRTFTVRWNQAGSTSSRFAIDLYQYQSPYQLQHTSYSYSMD-EDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVEDGSFG-CSDKFTLTTEEAASKNADTY--FLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFTS----DCGTYVTGLCDQ----CKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVV 753
            ++L V TP E  +VV+ R +TV W   GS ++R+ IDLY            Y  SM  ED CG WVT+LCPYGE GCPD+ GDYD+V+PEP +    S Y++ V  V+D   G CSD+F L     A    D    ++ VT+P  GD A  G  Y V+FDY+NG+GSS   F IDL+++    DCGT++  LCD+    CKDS G + + IP D +A  Y IRV   ED  ++ CS  F+++
Sbjct:    6 SALEVVTPAEGDIVVASRAYTVEWTGTGS-NNRYEIDLY------------YCGSMCMEDECGDWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDDDSGDCSDEFYLMAHAEAPSAGDAGGPYVTVTSPSSGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYSATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDDSVYGCSDEFEIL 234          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: A0A6H5JFT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFT9_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.910e-54
Identity = 109/251 (43.43%), Postives = 144/251 (57.37%), Query Frame = 1
Query:   49 LHCGH----ASLAVTTPEEDLVVVSGRTFTVRWNQAGSTSSRFAIDLYQYQSPYQLQHTSYSYSMD-EDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVED-GSFGCSDKFTLTTEEAASKNADTY--FLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFTS----DCGTYVTGLCDQ----CKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVV 753
            L CG     ++L V TP    +VVS R +TV W+  GS + RF IDLY            Y  SM  ED CG WVT+LCPYGE GCPD+ GDYD+V+PEP +    S Y++ V  V+D  S  CSD+F L     A   +D    ++ VT+P  GD A  G  Y V+FDY+NG+GSS   F IDL+ +    DCGT++  LCD+    CKDS G + + IP D +A  Y IRV   ED  ++ CS  F+++
Sbjct:   10 LACGMLGVASALEVVTPAAGDMVVSSRAYTVEWSGTGS-NKRFEIDLY------------YCNSMCMEDECGEWVTALCPYGEDGCPDNEGDYDIVMPEPMSGTSGSGYKVRVADVDDEDSSDCSDEFYLMAHADAPSASDAGGPYVTVTSPSTGDSAEAGEEYTVEFDYDNGLGSSVGRFAIDLYAATGSGDCGTFMYTLCDKPTIGCKDSMGDYDVEIPEDAEAGMYTIRVGDFEDESVYGCSDEFEIL 247          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: D7G3E8_ECTSI (Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3E8_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 3.200e-54
Identity = 109/257 (42.41%), Postives = 147/257 (57.20%), Query Frame = 1
Query:   13 LAKSLLLLLTTGLHCGHASLAVTTPEEDLVVVSGRTFTVRWNQAGSTSSRFAIDLYQYQSPYQLQHTSYSYSMDEDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVEDGS-FGCSDKFTLTTEEAASKNADT-YFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFTS----DCGTYVTGLCDQ----CKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVV 753
            +A++    L  G+     +L V +P    +VV+   +TV W   G+TS R+ IDLY   S              ED CG WVT+LCPYG+ GCPD+ GDYDVV+PEP  D   S Y++ V    D S +GCS  FTL     A    D   ++ VT+P DGD A+ G  Y V+FDY+NG+GSS + F IDL++S    DCGTYVT +CD+    CKDS G + + IP  T++  Y IRV   ED  ++ CS  F++V
Sbjct:    1 MARTAFAALAFGMLGAANALEVVSPAAGDMVVADSAYTVEWT--GATSGRYDIDLYYCGSVCM-----------EDECGDWVTALCPYGDDGCPDTQGDYDVVMPEPM-DGTSSGYKVMVTDSSDESDYGCSGDFTLIASTEAPDATDMGAYVSVTSPSDGDTAMAGGEYTVEFDYDNGLGSSVNRFAIDLYSSGGSGDCGTYVTTICDKPSIGCKDSQGDYDVVIPSGTESGMYSIRVGVFEDDDVYGCSDSFEIV 243          
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Match: A0A6H5KR87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR87_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.830e-50
Identity = 90/186 (48.39%), Postives = 112/186 (60.22%), Query Frame = 1
Query:  235 EDSCGTWVTSLCPYGERGCPDSTGDYDVVLPEPATDLPDSAYRIGVLGVED-GSFGCSDKFTLTTEEAASKNADT-YFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFT-----SDCGTYVTGLCDQ----CKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVVDE 759
            ED CG WVT+LCPYG  GCPD+ GDYD+V+PEP  D   S Y+I V    D  S GCS  FTL     A    +  Y L V +P DGD+A+ G  Y V++DY NG+GSS D F IDL+T      DCGTYV  LCD+    C DS G + + IP DT A  Y +RV    D  +FDCS  F++V++
Sbjct:    2 EDDCGDWVTALCPYGADGCPDTQGDYDIVMPEPM-DGTSSGYKIMVTDSNDESSMGCSGDFTLVASTDAPAAGEVGYSLTVNSPSDGDIAMAGEVYTVEWDYNNGLGSSKDRFAIDLYTYGTGTGDCGTYVATLCDKPTIGCPDSQGDYDVEIPSDTPAGMYSVRVGVFSDEIMFDCSEAFEIVND 186          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig7043.18102.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
Q8QKV3_ESV1K1.040e-15385.04EsV-1-163 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPI2_ECTSI3.940e-14079.77EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FYL2_ECTSI1.090e-6649.58EsV-1-163 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]
A0A6H5JY62_9PHAE7.960e-6146.12GPI-anchored domain-containing protein n=2 Tax=Ect... [more]
A0A6H5JRG9_9PHAE1.900e-5945.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3F0_ECTSI2.340e-5743.08EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LI46_ECTSI5.560e-5543.39EsV-1-163 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JFT9_9PHAE1.910e-5443.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3E8_ECTSI3.200e-5442.41Imm upregulated 4 n=1 Tax=Ectocarpus siliculosus T... [more]
A0A6H5KR87_9PHAE1.830e-5048.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig7043contigEcto-sp13_S_contig7043:1367..2128 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size762
Hectar predicted targeting categorysignal peptide
Exons1
Ec32 ortholog descriptionEsV-1-163
Ec32 orthologEc-06_005290.1
Cds size759
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463966.528881-CDS-Ecto-sp13_S_contig7043:1366..21251681463966.528881-CDS-Ecto-sp13_S_contig7043:1366..2125Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig7043 1367..2125 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463966.5410607-UTR-Ecto-sp13_S_contig7043:2125..21281681463966.5410607-UTR-Ecto-sp13_S_contig7043:2125..2128Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig7043 2126..2128 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig7043.18102.1prot_Ecto-sp13_S_contig7043.18102.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig7043 1367..2125 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig7043.18102.1

>prot_Ecto-sp13_S_contig7043.18102.1 ID=prot_Ecto-sp13_S_contig7043.18102.1|Name=mRNA_Ecto-sp13_S_contig7043.18102.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=253bp
MLGLAKSLLLLLTTGLHCGHASLAVTTPEEDLVVVSGRTFTVRWNQAGST
SSRFAIDLYQYQSPYQLQHTSYSYSMDEDSCGTWVTSLCPYGERGCPDST
GDYDVVLPEPATDLPDSAYRIGVLGVEDGSFGCSDKFTLTTEEAASKNAD
TYFLVVTAPLDGDVAVIGRTYDVQFDYENGVGSSADMFDIDLFTSDCGTY
VTGLCDQCKDSGGSHPIFIPMDTDADFYRIRVARVEDPFLFDCSGVFKVV
DEF
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mRNA from alignment at Ecto-sp13_S_contig7043:1367..2128-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig7043.18102.1 ID=mRNA_Ecto-sp13_S_contig7043.18102.1|Name=mRNA_Ecto-sp13_S_contig7043.18102.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=762bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7043:1367..2128- (Ectocarpus species13 EcNAP12_S_4_19m)
AGCATGCTTGGTTTGGCCAAGAGTCTTCTCCTACTACTGACAACAGGTCT CCACTGCGGCCATGCATCGCTTGCAGTGACGACCCCCGAGGAAGACCTGG TGGTCGTCTCCGGGAGGACTTTCACCGTCCGGTGGAACCAAGCTGGATCA ACGTCCAGTCGGTTCGCCATCGACCTCTATCAATATCAATCTCCATATCA ATTGCAACACACATCATACTCGTACTCCATGGACGAAGATTCGTGCGGGA CATGGGTGACGTCGCTATGTCCCTACGGAGAGCGCGGCTGCCCGGACTCG ACTGGCGACTACGACGTCGTGCTTCCGGAACCCGCCACAGACCTCCCAGA CTCGGCGTACCGGATCGGCGTACTGGGCGTCGAAGATGGATCGTTTGGGT GCTCCGACAAGTTCACTTTGACCACAGAAGAAGCCGCATCGAAAAACGCC GACACATACTTCCTCGTTGTCACGGCTCCGCTGGACGGGGACGTTGCTGT TATTGGTCGTACGTATGATGTTCAGTTTGACTACGAGAACGGGGTAGGGT CCAGCGCGGATATGTTTGACATCGACTTGTTCACCAGTGACTGTGGAACG TACGTCACCGGCCTTTGCGACCAGTGCAAGGACTCGGGTGGTTCGCACCC GATATTCATTCCGATGGACACCGACGCCGATTTCTACCGCATTCGTGTCG CCAGGGTCGAAGACCCCTTTCTTTTCGACTGTTCGGGAGTGTTTAAAGTC GTGGACGAGTTT
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig7043:1367..2128-

>mRNA_Ecto-sp13_S_contig7043.18102.1 ID=mRNA_Ecto-sp13_S_contig7043.18102.1|Name=mRNA_Ecto-sp13_S_contig7043.18102.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=759bp|location=Sequence derived from alignment at Ecto-sp13_S_contig7043:1367..2128- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTTGGTTTGGCCAAGAGTCTTCTCCTACTACTGACAACAGGTCTCCA
CTGCGGCCATGCATCGCTTGCAGTGACGACCCCCGAGGAAGACCTGGTGG
TCGTCTCCGGGAGGACTTTCACCGTCCGGTGGAACCAAGCTGGATCAACG
TCCAGTCGGTTCGCCATCGACCTCTATCAATATCAATCTCCATATCAATT
GCAACACACATCATACTCGTACTCCATGGACGAAGATTCGTGCGGGACAT
GGGTGACGTCGCTATGTCCCTACGGAGAGCGCGGCTGCCCGGACTCGACT
GGCGACTACGACGTCGTGCTTCCGGAACCCGCCACAGACCTCCCAGACTC
GGCGTACCGGATCGGCGTACTGGGCGTCGAAGATGGATCGTTTGGGTGCT
CCGACAAGTTCACTTTGACCACAGAAGAAGCCGCATCGAAAAACGCCGAC
ACATACTTCCTCGTTGTCACGGCTCCGCTGGACGGGGACGTTGCTGTTAT
TGGTCGTACGTATGATGTTCAGTTTGACTACGAGAACGGGGTAGGGTCCA
GCGCGGATATGTTTGACATCGACTTGTTCACCAGTGACTGTGGAACGTAC
GTCACCGGCCTTTGCGACCAGTGCAAGGACTCGGGTGGTTCGCACCCGAT
ATTCATTCCGATGGACACCGACGCCGATTTCTACCGCATTCGTGTCGCCA
GGGTCGAAGACCCCTTTCTTTTCGACTGTTCGGGAGTGTTTAAAGTCGTG
GACGAGTTT
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