mRNA_Ecto-sp13_S_contig704.18095.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: D7G0K3_ECTSI (PIPK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K3_ECTSI) HSP 1 Score: 267 bits (682), Expect = 1.700e-87 Identity = 138/150 (92.00%), Postives = 142/150 (94.67%), Query Frame = 1
Query: 427 MFTKVDCTEIVHAPVRESAATRNAYHDEGEYQEAGEDTEERGHAPPLLFFEYAAPAFAHLRGVYGMPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRVTNPRTKR 876
M VDCTEIVH PVRE+AAT NAY DEGEY+EAGEDT E GHAPPLLFFEYAAPAFAHLRGVYGMPSSEYR+SFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHV+RRRGSLITRFFGVYRVTNPRTKR
Sbjct: 1 MMYSVDCTEIVHPPVRENAATGNAYDDEGEYREAGEDTGE-GHAPPLLFFEYAAPAFAHLRGVYGMPSSEYRRSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVARRRGSLITRFFGVYRVTNPRTKR 149
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: D7G0K4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K4_ECTSI) HSP 1 Score: 195 bits (495), Expect = 9.090e-60 Identity = 98/103 (95.15%), Postives = 100/103 (97.09%), Query Frame = 1
Query: 130 GGVGLRRFWRSLWRRACKRELLEGVLKVVVWSFFAERLLQSALVGWGLSGRVGPVEQLGGTLMEANPSDARFAETKAVLKGVRVGRDTLHLNTARASPEMFTK 438
GG GLRRF RSLW+RA KRELLEGVLKVVVWSFFAERLLQSALVGWGLSGRVGPVEQLGGTLMEANPSDARFAET+AVLKGVRVGRDTLHLNTARASPEMFTK
Sbjct: 11 GGDGLRRFLRSLWKRAVKRELLEGVLKVVVWSFFAERLLQSALVGWGLSGRVGPVEQLGGTLMEANPSDARFAETRAVLKGVRVGRDTLHLNTARASPEMFTK 113
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: A0A6H5K9A1_9PHAE (PIPK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A1_9PHAE) HSP 1 Score: 159 bits (403), Expect = 1.200e-43 Identity = 82/85 (96.47%), Postives = 85/85 (100.00%), Query Frame = 1
Query: 622 MPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRVTNPRTKR 876
MPSSEYR+SF+EDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHV+RRRGSLITRFFGVYRVTNPRTKR
Sbjct: 1 MPSSEYRRSFQEDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVARRRGSLITRFFGVYRVTNPRTKR 85
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: A0A835Z474_9STRA (PIPK domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z474_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.590e-17 Identity = 51/107 (47.66%), Postives = 65/107 (60.75%), Query Frame = 1
Query: 556 APPLLFFEYAAPAFAHLRGVYGMPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASES------ELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRVT 858
A ++F EYA P F LR + Y SF E +I A+NSKSAQ F FS DG+YM+KT S++ E+ S + LLPHYAEH+ SL+TRF G+YRVT
Sbjct: 34 AEAVVFEEYAGPVFQRLRDSMRLSQHSYIASFPELGSVIEFAANSKSAQRFFFSSDGRYMMKTMSDTKTMSDTEVASFMALLPHYAEHLRTHSASLLTRFLGLYRVT 140
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: A0A7S2ECC3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ECC3_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.730e-13 Identity = 40/95 (42.11%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 571 FFEYAAPAFAHLRGVYGMPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRV 855
F +Y+ AFA++R ++G+ E+ S ++ I SN+KS Q F +S DGKYM+KT + +E + R+LPHY H ++ +LIT+FFG+YRV
Sbjct: 273 FKDYSPQAFAYIRRMFGINEYEFLLSVCGNANFIEFISNAKSGQFFFYSSDGKYMIKTMTNAESKFLRRILPHYFRHCAQYPNTLITKFFGMYRV 367
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: A0A7S0UHU0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UHU0_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 4.000e-13 Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 571 FFEYAAPAFAHLRGVYGMPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRV 855
F +YA AFA+LR ++G+ ++ S ++ I SN+KS Q F +S DGKYM+KT + SE + R+LPHY H + +L+T+F G+YRV
Sbjct: 227 FKDYAPVAFAYLRRLFGVNEFDFLLSVCGNANFIEFISNAKSGQFFFYSSDGKYMIKTMTNSESKFLRRILPHYFRHCTENPNTLLTKFLGMYRV 321
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: B8C473_THAPS (PIPK domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C473_THAPS) HSP 1 Score: 76.6 bits (187), Expect = 5.440e-13 Identity = 37/95 (38.95%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 571 FFEYAAPAFAHLRGVYGMPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRV 855
F +Y+ AFA+LR ++G+ E+ S ++ I SN+KS Q F +S+DGKYM+KT + +E + R++PHY H + +L+T+F G+YR+
Sbjct: 91 FKDYSPLAFAYLRRMFGVNEYEFLLSVCGNANYIEFQSNAKSGQFFFYSKDGKYMIKTMTNTESKFLRRIMPHYFRHCAMNPNTLVTKFLGMYRL 185
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: A0A1E7FQZ5_9STRA (SAICAR synthase-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQZ5_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.010e-12 Identity = 39/95 (41.05%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 571 FFEYAAPAFAHLRGVYGMPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRV 855
F +YA FA+LR ++G+ ++ S ++ I SN+KS Q F +S DGKYM+KT + +E + R+LPHY H + SL+T+F G+YRV
Sbjct: 242 FKDYAPVTFAYLRRMFGVNEFDFLLSVCGNANFIEFISNAKSGQFFFYSSDGKYMIKTMTNTESKFLRRILPHYFRHCTENPNSLVTKFLGMYRV 336
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: A0A1Z5KDR3_FISSO (1-phosphatidylinositol-4-phosphate 5-kinase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KDR3_FISSO) HSP 1 Score: 78.6 bits (192), Expect = 1.350e-12 Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 556 APPLLFFEYAAPAFAHLRGVYGMPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRV 855
A F +YA FA+LR ++G+ ++ S ++ I SN+KS Q F +S DGKYM+KT + +E + R+LP Y +H + ++ITRFFG+YRV
Sbjct: 300 AHTFKFKDYAPVVFAYLRRMFGVNEFDFLLSVCGNANFIEFISNAKSGQFFFYSSDGKYMIKTMTNAESKFLRRILPDYLKHCAENPNTMITRFFGMYRV 399
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Match: B7GAW8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GAW8_PHATC) HSP 1 Score: 78.2 bits (191), Expect = 1.910e-12 Identity = 44/114 (38.60%), Postives = 64/114 (56.14%), Query Frame = 1
Query: 514 EYQEAGEDTEERGHAPPLLFFEYAAPAFAHLRGVYGMPSSEYRKSFREDSRMIALASNSKSAQSFMFSEDGKYMLKTASESELDSMLRLLPHYAEHVSRRRGSLITRFFGVYRV 855
E++ G T A F +Y+ FA+LR +YG+ ++ S ++ I SN+KS Q F +S DGKYM+KT + +E + R+LP Y H +LITRFFG+YRV
Sbjct: 436 EFRPKGGATPPHRLAHTFKFKDYSPIVFAYLRRMYGVNEFDFLLSVCGNANFIEFISNAKSGQFFFYSSDGKYMIKTMTNAESKFLRRILPSYFRHCCENPNTLITRFFGMYRV 549 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig704.18095.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig704.18095.1 >prot_Ecto-sp13_S_contig704.18095.1 ID=prot_Ecto-sp13_S_contig704.18095.1|Name=mRNA_Ecto-sp13_S_contig704.18095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=292bp APRATAAAAAAATAAEPVPFWLRSSGAGPTGAMANTSSPLEAAGGVGLRRback to top mRNA from alignment at Ecto-sp13_S_contig704:15382..22043+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig704.18095.1 ID=mRNA_Ecto-sp13_S_contig704.18095.1|Name=mRNA_Ecto-sp13_S_contig704.18095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6662bp|location=Sequence derived from alignment at Ecto-sp13_S_contig704:15382..22043+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig704:15382..22043+ >mRNA_Ecto-sp13_S_contig704.18095.1 ID=mRNA_Ecto-sp13_S_contig704.18095.1|Name=mRNA_Ecto-sp13_S_contig704.18095.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=876bp|location=Sequence derived from alignment at Ecto-sp13_S_contig704:15382..22043+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |