prot_Ecto-sp13_S_contig1213.1807.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig1213.1807.1
Unique Nameprot_Ecto-sp13_S_contig1213.1807.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length538
Homology
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BLAST of mRNA_Ecto-sp13_S_contig1213.1807.1 vs. uniprot
Match: D7FX84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX84_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 2.780e-133
Identity = 375/542 (69.19%), Postives = 380/542 (70.11%), Query Frame = 0 
Query:    1 MSSGGGRGPRPPTSGRSTEPGEPSKDQEDNPFVRQLELMLQKSASNRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSLMANSKPEEKKAGTSNGGIGLPRAPSRSLFSLPESSSDEDEEAFQRRYFGLPXXXXXXXXXXXXXXXXXXXAPAEAKVARPRSDGGWPETKRCSPPNLKASLISNGRGAACRKTEGGSGDSRGNYSANVSKENGKGQ-QSARDGGAASSGRAGLGITGDRWYVGAGITRSQPTAQRRTGDGVGSARAAAAGSYNEWMSDAEDSGGAAPNAADSPTRRAGGLKRGRTPPTYDRPYSPSSDDNGXXXXXXXXRKTGRLEGRYPAPMPARRERSNSLSLSPPRLLACDHDYVTSDEEESSKPGTGGRRKGSRGGEGGGRKEPQLLSNPATA-GSTAVGRGRKRGHEDLLNEKIEAMRVGSDEEGPHAGXXXXXXXXXXXXXXXXXXXXXXXXXXE--VDYEDLKPHIEDPPWLGKLVPFDLEEGGFINPSINRYLRDYQREGVR 538
            MSSGGGRGPRPPT GR TEPGEPS+DQEDNPFVRQLELMLQKSASNRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  L+AN KP               RA SRSLFSLP                   XXXXXXXXXXXXXXXXXXXA AEAKVARP SDGGWPETKRCSPPNLKASLISNGRGAACRKTEGGSGDSRG+ SAN SK NGK + QSARDG AASSGRAGLGITGDRWY GAGITR QPTAQRRTGDG+GSA AAAAGS NEWMSDAED  GA PNA DSPTRRAGGL                                                                      DEE                     RKE QLLSNPATA GSTAVGRGRKRGHED LNEKIEAMRVGSDEEGPHAG XXXXXXXXXXXXXX       XXXX   VDYEDLKPHIEDPPWLGKLVPFDL EGGFINPSINRYLRDYQREGVR
Sbjct:    1 MSSGGGRGPRPPTFGRRTEPGEPSEDQEDNPFVRQLELMLQKSASNRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVANCKPXXXXXXXXXXXXXX-RASSRSLFSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAEAKVARPGSDGGWPETKRCSPPNLKASLISNGRGAACRKTEGGSGDSRGDDSANGSKGNGKXKGQSARDGDAASSGRAGLGITGDRWYGGAGITRPQPTAQRRTGDGIGSAGAAAAGSDNEWMSDAEDPRGATPNAIDSPTRRAGGLN---------------------------------------------------------------------DEEXXXXXXXXXXXXXXXXXXXXXRKELQLLSNPATAAGSTAVGRGRKRGHEDFLNEKIEAMRVGSDEEGPHAGGXXXXXXXXXXXXXXAVTMGPDXXXXXXXVDYEDLKPHIEDPPWLGKLVPFDLGEGGFINPSINRYLRDYQREGVR 472
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig1213.1807.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FX84_ECTSI2.780e-13369.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig1213contigEcto-sp13_S_contig1213:284..1897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig1213.1807.1mRNA_Ecto-sp13_S_contig1213.1807.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig1213 284..1897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig1213.1807.1 ID=prot_Ecto-sp13_S_contig1213.1807.1|Name=mRNA_Ecto-sp13_S_contig1213.1807.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=538bp
MSSGGGRGPRPPTSGRSTEPGEPSKDQEDNPFVRQLELMLQKSASNRAAA
VSPPPPRARGAANAASTSAWRPRTSLSSGGGGAASGRVVAAGGASQYGGQ
SLMANSKPEEKKAGTSNGGIGLPRAPSRSLFSLPESSSDEDEEAFQRRYF
GLPPLRKPSAAAAAASVPPPAAAPAEAKVARPRSDGGWPETKRCSPPNLK
ASLISNGRGAACRKTEGGSGDSRGNYSANVSKENGKGQQSARDGGAASSG
RAGLGITGDRWYVGAGITRSQPTAQRRTGDGVGSARAAAAGSYNEWMSDA
EDSGGAAPNAADSPTRRAGGLKRGRTPPTYDRPYSPSSDDNGDGGGGGRG
RKTGRLEGRYPAPMPARRERSNSLSLSPPRLLACDHDYVTSDEEESSKPG
TGGRRKGSRGGEGGGRKEPQLLSNPATAGSTAVGRGRKRGHEDLLNEKIE
AMRVGSDEEGPHAGGGGRGGGRGRRRGGAVTMGPDEEEEEEVDYEDLKPH
IEDPPWLGKLVPFDLEEGGFINPSINRYLRDYQREGVR
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