mRNA_Ecto-sp13_S_contig69875.18003.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: D7FIW4_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIW4_ECTSI) HSP 1 Score: 131 bits (330), Expect = 4.120e-34 Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 1
Query: 7 AGRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQE 201
AGRVNGNLNLSRSIGDLKYKANK LPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQE
Sbjct: 571 AGRVNGNLNLSRSIGDLKYKANKGLPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQE 635
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A7S3XT22_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT22_HETAK) HSP 1 Score: 103 bits (257), Expect = 4.610e-26 Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 7 AGRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQE 201
AGRVNGNLNLSRS+GDLKYK NK LPP DQMITAEPD+ E+ +D F+I+ CDG+WDC T+QE
Sbjct: 94 AGRVNGNLNLSRSLGDLKYKQNKALPPRDQMITAEPDVTCTELQPDDEFIIIGCDGIWDCKTNQE 158
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A7R9UDU4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDU4_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.520e-25 Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 1
Query: 4 QAGRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQE 201
+ GRVNGNLNLSRSIGDLKYK NK +PPA+Q+ITAEPD+ VE++ +D F +LACDGVWDCM++Q+
Sbjct: 317 RVGRVNGNLNLSRSIGDLKYKQNKSIPPAEQIITAEPDVSVVEISPDDEFFVLACDGVWDCMSNQQ 382
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A7S2XW64_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW64_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.530e-25 Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 7 AGRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQE 201
AGRVNGNLNLSRS+GDLKYK N ++ DQMITAEPD+ ++ DED F+I+ACDGVWDCMT+QE
Sbjct: 75 AGRVNGNLNLSRSVGDLKYKQNTQVARKDQMITAEPDVTITDLKDEDEFVIIACDGVWDCMTNQE 139
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A1D6P7P8_MAIZE (Protein-serine/threonine phosphatase n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6P7P8_MAIZE) HSP 1 Score: 97.1 bits (240), Expect = 3.200e-24 Identity = 41/65 (63.08%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 10 GRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQEV 204
G VNGNLNLSR+IGD+K+K NK LPP Q++TA PD+ VE+ D+D F++LACDG+WDCM+SQ++
Sbjct: 37 GHVNGNLNLSRAIGDMKFKQNKFLPPDKQILTANPDINIVELCDDDEFIVLACDGIWDCMSSQQL 101
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A7S0BUX4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BUX4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 3.560e-24 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = 1
Query: 4 QAGRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQE 201
Q GRVNGNLNLSRSIGDLKYK K LPP+ QMITAEPD+ V++ D F IL CDG+WDC+++++
Sbjct: 13 QFGRVNGNLNLSRSIGDLKYKQTKSLPPSAQMITAEPDILQVKLNPGDEFFILGCDGIWDCLSNEQ 78
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A1D6P7P9_MAIZE (Protein-serine/threonine phosphatase n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6P7P9_MAIZE) HSP 1 Score: 97.1 bits (240), Expect = 4.630e-24 Identity = 41/65 (63.08%), Postives = 55/65 (84.62%), Query Frame = 1
Query: 10 GRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQEV 204
G VNGNLNLSR+IGD+K+K NK LPP Q++TA PD+ VE+ D+D F++LACDG+WDCM+SQ++
Sbjct: 41 GHVNGNLNLSRAIGDMKFKQNKFLPPDKQILTANPDINIVELCDDDEFIVLACDGIWDCMSSQQL 105
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A1D6MDW3_MAIZE (Protein-serine/threonine phosphatase n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6MDW3_MAIZE) HSP 1 Score: 95.5 bits (236), Expect = 4.970e-24 Identity = 41/65 (63.08%), Postives = 54/65 (83.08%), Query Frame = 1
Query: 10 GRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQEV 204
G VNGNLNLSR+IGD+K+K NK LPP Q++TA PD+ VE+ D D F++LACDG+WDCM+SQ++
Sbjct: 2 GHVNGNLNLSRAIGDMKFKQNKFLPPDKQILTANPDINIVELCDVDEFIVLACDGIWDCMSSQQL 66
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A7S1UEX6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEX6_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.680e-24 Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 4 QAGRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQE 201
+ GRVNGNLNLSRSIGDLKYK N PP Q+ITAEPD+ +E+ D+D F +LACDGVWDCMT+Q+
Sbjct: 320 RVGRVNGNLNLSRSIGDLKYKQNTSKPPEGQIITAEPDVSVIELVDDDEFFVLACDGVWDCMTNQQ 385
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Match: A0A2R5G4L7_9STRA (Protein phosphatase, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4L7_9STRA) HSP 1 Score: 102 bits (253), Expect = 5.770e-24 Identity = 47/65 (72.31%), Postives = 57/65 (87.69%), Query Frame = 1
Query: 4 QAGRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRFMILACDGVWDCMTSQ 198
+AGRVNGNLNLSRSIGDLKYK N++L PADQ+ITAEPD++ E+TDED F +ACDGV+D MT+Q
Sbjct: 285 EAGRVNGNLNLSRSIGDLKYKVNEDLDPADQIITAEPDVRVFELTDEDEFFFIACDGVYDVMTNQ 349 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69875.18003.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig69875.18003.1 >prot_Ecto-sp13_S_contig69875.18003.1 ID=prot_Ecto-sp13_S_contig69875.18003.1|Name=mRNA_Ecto-sp13_S_contig69875.18003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=68bp LQAGRVNGNLNLSRSIGDLKYKANKELPPADQMITAEPDLKSVEVTDEDRback to top mRNA from alignment at Ecto-sp13_S_contig69875:20..223- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig69875.18003.1 ID=mRNA_Ecto-sp13_S_contig69875.18003.1|Name=mRNA_Ecto-sp13_S_contig69875.18003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=204bp|location=Sequence derived from alignment at Ecto-sp13_S_contig69875:20..223- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig69875:20..223- >mRNA_Ecto-sp13_S_contig69875.18003.1 ID=mRNA_Ecto-sp13_S_contig69875.18003.1|Name=mRNA_Ecto-sp13_S_contig69875.18003.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=204bp|location=Sequence derived from alignment at Ecto-sp13_S_contig69875:20..223- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |