Homology
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match:
A0A6H5K5R8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R8_9PHAE)
HSP 1 Score: 358 bits (919), Expect = 3.800e-122
Identity = 190/285 (66.67%), Postives = 201/285 (70.53%), Query Frame = 1
Query: 1 MFSTTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRAGMFFGTDPAHYSSDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVNDAFKIREELCCVFIGCSCCVAVLWVIQVLVELEIWPNTSAFHVVVEVQALLVGMNSGISGLLLPM----------------------------------------------------------------------------IARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 627
MF+TTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAV C+GLTIRAG+FFGTDPAHYSSDMRECFYWDDI+L GAVLLFG APMSCLAIRISRV+DAFK+REELC VFIGCSCCVAVLWVIQVLVELE+ +TSA HVVVEVQALL+GMN G+SGLLLPM IARNPEDEQFNCFLHILNHYLLPTSPDEIN+SSAMHKRIAPFRTR
Sbjct: 1 MFATTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVGCIGLTIRAGIFFGTDPAHYSSDMRECFYWDDIMLMGAVLLFGGAPMSCLAIRISRVHDAFKLREELCFVFIGCSCCVAVLWVIQVLVELELLSDTSALHVVVEVQALLIGMNIGLSGLLLPMVRAHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSGGEMAEQFGKFCRENLCMESWDFLVDVVRYERMAPSPIARNPEDEQFNCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTR 285
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match:
D8LQY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY9_ECTSI)
HSP 1 Score: 296 bits (758), Expect = 8.540e-100
Identity = 147/202 (72.77%), Postives = 171/202 (84.65%), Query Frame = 1
Query: 22 VIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRAGMFFGTDPAHYSSDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVNDAFKIREELCCVFIGCSCCVAVLWVIQVLVELEIWPNTSAFHVVVEVQALLVGMNSGISGLLLPMIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 627
+IRA+RLV+AYNRKYRLKYA+FVKR ALGFWAV +GLT+RAG+FFGTDPAHYSSDMRECFYWDDI + G L+FG AP+S L IRISRVNDAF++REELC +GCS +LWVIQVLVELE+WP+T A HVVVEV LL+GMN+G GLLLPM++ +PE EQFN FL+ILN YLLPTSPDEIN+SSAM K +A FRTR
Sbjct: 1 MIRAIRLVIAYNRKYRLKYAKFVKRKRALGFWAVISIGLTVRAGLFFGTDPAHYSSDMRECFYWDDIFVVGIGLIFGGAPVSLLVIRISRVNDAFQLREELCRTIMGCSGIAVILWVIQVLVELEVWPDTPALHVVVEVLILLLGMNAGYWGLLLPMMS-SPE-EQFNSFLYILNQYLLPTSPDEINISSAMSKHMATFRTR 200
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match:
A0A6H5KE83_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE83_9PHAE)
HSP 1 Score: 266 bits (679), Expect = 6.880e-84
Identity = 178/443 (40.18%), Postives = 191/443 (43.12%), Query Frame = 1
Query: 1 MFSTTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRAGMFFGTDPAHYS------------------------------------------------------------------------------------------------------------------------------SDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVNDAFKIREELCCVFIGCSCCVAVLWVIQVLVELEIWPNTSAFHVVVEVQALLVGMNSGISGLLLPMIA------------------------------------------------------------------------------------------------------------RNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 627
MF+TTPYVIRAVRLVVAYNRK RLKYARFVKRN+ALGF AVAC+GLTIRAG+FFGTDPAHYS SDMRECFYWDDIIL G ++L PMSCLAIRISRVNDAFKIREELC VFIGCSCC AVLWVIQVLVEL++ +TSA HVVV+VQALL+GMN GISGLLLPM+ NPEDEQ CFLHILNHYLLPTSPDEIN+SSAMHKRIAPFRTR
Sbjct: 1 MFATTPYVIRAVRLVVAYNRKCRLKYARFVKRNHALGFGAVACIGLTIRAGIFFGTDPAHYSRGQPNTQLEACQSGPLLQRRTRLQNTCRRRSHASIGVSDMRECFYWDVIILVGAILLLRGPPMSCLAIRISRAAGEGWQPLLLPPREKEKTKRRTRSNNCKPSCWRCTFPLISFISRLNCSYSLLCSDMRECFYWDDIILVGVMILSSGPPMSCLAIRISRVNDAFKIREELCFVFIGCSCCAAVLWVIQVLVELDLLSDTSALHVVVQVQALLIGMNIGISGLLLPMVRTHRGGVKAWFRATVVPVDETVAVSALDVDGVVGLASSVGEMAEQFGKFCRENLCMESWDLLVDVVRYERMVPSPSNIFCRVGFDTRWSCLWNFSHPNGLTWFVRFADRENPEDEQLKCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTR 443
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match:
D8LQX1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX1_ECTSI)
HSP 1 Score: 123 bits (308), Expect = 6.710e-31
Identity = 85/205 (41.46%), Postives = 109/205 (53.17%), Query Frame = 1
Query: 16 PYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRAGMFFGTDPAHYSSDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVNDAFKIREELCCVFIGCSCCVAVLWVIQVLVEL-EIWPNTSAFHVVVEVQALLVGMNSGISGLLLPMIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 627
PY IRAVRLV+AYNRKYRLKYA+FVKR +A G + + LTIRAG+FFG DPAHYSS +L + V + F ++ C VL + EL + + ++ +E LV + + ++A +PEDEQFN FL ILN YLLPTSPDEIN+SS+M RI F TR
Sbjct: 2 PYFIRAVRLVIAYNRKYRLKYAKFVKRKHATGVLVLTFIVLTIRAGLFFGDDPAHYSS-----------LLLPMARAHRGGVQEWFRATVVPVEEVFTVQASDEC---------GVLRLASGGGELAQQFGKFCQENLCMESWDFLVDVVR-YERIAPSLVANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTR 185
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match:
D8LQW8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW8_ECTSI)
HSP 1 Score: 69.7 bits (169), Expect = 3.750e-11
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 490 MIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 627
+IA +PEDEQFN FL ILN YLLPTSPDEIN+SS+M RI F TR
Sbjct: 77 LIANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTR 122
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match:
A0A6H5L0L8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L8_9PHAE)
HSP 1 Score: 58.2 bits (139), Expect = 1.890e-6
Identity = 26/39 (66.67%), Postives = 33/39 (84.62%), Query Frame = 1
Query: 511 DEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 627
D+QF+ FL +LN YLLPTSPDE+N+SS M KR+A F+TR
Sbjct: 326 DDQFDEFLILLNQYLLPTSPDEVNISSKMSKRMASFKTR 364
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Match:
D7FYH4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH4_ECTSI)
HSP 1 Score: 53.1 bits (126), Expect = 5.360e-6
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 1
Query: 469 ISGLLLPMIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMHKRIAPFRTR 627
+ L M+ DEQF F I + YLL TSPDE+N+SSA K +A FRTR
Sbjct: 38 VDATLYEMMDATDADEQFMTFTMISDRYLLATSPDEVNISSATSKHVAAFRTR 90
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10151.180.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 7
0 1 Expect = 3.80e-122 / Id = 66.67 Expect = 8.54e-100 / Id = 72.77 Expect = 6.88e-84 / Id = 40.18 Expect = 6.71e-31 / Id = 41.46 Expect = 3.75e-11 / Id = 71.74 Expect = 1.89e-6 / Id = 66.67 Expect = 5.36e-6 / Id = 49.06 Sequence A0A6H5K5R8_9PHAE D8LQY9_ECTSI A0A6H5KE83_9PHAE D8LQX1_ECTSI D8LQW8_ECTSI A0A6H5L0L8_9PHAE D7FYH4_ECTSI
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10151.180.1
>prot_Ecto-sp13_S_contig10151.180.1 ID=prot_Ecto-sp13_S_contig10151.180.1|Name=mRNA_Ecto-sp13_S_contig10151.180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=209bp
MFSTTPYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVACMGLTIRA GMFFGTDPAHYSSDMRECFYWDDIILAGAVLLFGAAPMSCLAIRISRVND AFKIREELCCVFIGCSCCVAVLWVIQVLVELEIWPNTSAFHVVVEVQALL VGMNSGISGLLLPMIARNPEDEQFNCFLHILNHYLLPTSPDEINVSSAMH KRIAPFRTR back to top mRNA from alignment at Ecto-sp13_S_contig10151:3148..5618-
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10151.180.1 ID=mRNA_Ecto-sp13_S_contig10151.180.1|Name=mRNA_Ecto-sp13_S_contig10151.180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2471bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10151:3148..5618- (Ectocarpus species13 EcNAP12_S_4_19m)ATGTTTTCCACGACCCCGTACGTGATTCGGGCCGTTCGATTGGTGGTCGC
GTACAATCGAAAATATCGGCTCAAGTACGCCAGATTCGTGAAGAGAAATT
ATGCTTTGGGCTTCTGGGCCGTGGCCTGCATGGGGCTCACAATCCGAGCC
GGGATGTTCTTCGGGACCGATCCCGCACACTACTCCAG GTGACAACCAAA
CACACAGCTTGAAGCCTGCCAGAGCGGACGGCTCTTGCAGGGCCGGATGC
TATTGCAGAATACGTGTAGGTTGTGGAATCGACAAACCGCTGAACATTGG
ATGTTTCCGACGTCGGTCCACAAACTATGTACATAAGGGTCAACGCTCAT
TCCAGGTTGAGAACCGAACGCTTGATGCTTCGAATTGTCGGTTCCATAGG
CAGGCGCAGGTCTCACGCAAGCATTGGAGTCACGTTTTCGAACGTTTAGA
TACGCCAGCAAGGTTGGGTAGCATCTCATTGCTACCGTAGTCTTGGAAGA
AGGTGCACTGTCAAGCGTTCGCCTCATCATCCACCTCTTTCGCCTCGACG
ACTATGCACCAATGCATCCCTCTTTCGATAATCGCGTGAGCACCGTCATG
GTAACGGAGATCTGTCAATCGAGCGCAAAATGAAATCGCGTGTTGGAGGT
ACACTTCTCCATCTCTCGAACCTCCCGGCTCAACTACCCTTATTCGCTGC
TCTGCAGTGACATGCGAGAGTGTTTCTACTGGGACGACATCATTCTCGCG
GGAGCAGTACTCCTTTTTGGCGCAGCGCCGATGTCGTGTTTGGCCATACG
TATATCGCGAGTAAACGACGCCTTTAAGATTCGCGAGGAACTGTGTTGTG
TGTTCATCGGCTGCTCCTGCTGCGTAG GTGAGGGAAAAAAAGCTATCTGA
ACGCTACACAAAGCTACGGTAGCCCTTCCATATTGCACTCTAGACCCTCT
CTCGGAAGGCTTCCCGGCACCAGTTAAGGGTAGGGTGAGCGTCCTGATGC
AGAGGGCAGAATGTATCAGACTAATAATGGTTTCCGTCTATGGCATGCGT
CCTGAGTTGCAAACTTAGGCCTTGTTTCATCGTTGGCATACGTGTCATGC
ACCATTATCACCCTCCCAGGGTGCACAGAGGAAGTTTGCGATCAAGTTGC
GACCATCCTCTGCTTGCCGTGCGTCACGCACGATGAGAGCCAAGATTCTG
GAATAATCAAATTCACCTACGCTTGAGTGACGATACATTGGACCCACCAA
TCAGCACGTGACGCTGTCCGTGGGTCGCTGTCTCTGCCTTTTACGCAGCT
GTACTGTGGGTGATCCAGGTGCTGGTGGAACTGGAAATATGGCCCAATAC
ATCCGCATTTCACGTGGTGGTCGAAGTGCAAGCGCTCCTGGTGGGGATGA
ACAGTGGAATTTCGGG GTGAGACACAGCTCATTGTCGCTGTCGGTAGTGT
CATACCTCGAACAGGTTGATTCGCCTCAGAATCAGGCACATTCGTTTAGC
CTCTGCGTCCGCGCCGACATAAATAGGGTTTGGCTTCCAAGTGGAACGTG
ATATAGGCCCGTGCCGCTATGTAGTCAGGCCTCCCCCCCTCTTGGCGAGG
ACGTACAACAGGGCGTGGATATGTCCGGGGAGACCTGTTTCTCTCACCTG
CCGCCTGCATGAAGCCACAATGAAAGCCAAGGTAGTGTTCCACCATTTGG
CCACCCGCGCGAATCTTGCTCCATATGTTGGCTGTTGCATCGACGCAGCT
TGCTCCTTCCCATG GTGAGAGCCCACCGTGGTGGGGTGCAAGCATGGTTC
ATGGCTACTGTGGTTCCTGTCGAAGAGACGGTCGCCGTGTCAGCGTTGGA
TGTGGATGGCGTGGTAGGGCTGGCAAGCAGTGGTGGAGAAATTGCTGAGC
AGTTTGGAAATTTCTGCCAAGAGAACTTGTGCATGGAGAGCTGGGATTTC
CTCGTGGACGTTGTCCGCTACGAACGCATGGCGCCAAGCCTCGTAAGTAC
ATGTACAACAGCCAAATACAGAACATGTCATTTGATGATGCTCCCTTGAT
ATACCCAGAGCCGCACAAAAAACCTTAGGTCGTCGCATGCGTACGCAAAG
GGCGACACGATACATCATGGATATCAGGTTGGTGTGGCTGATATAAGGCA
AGAATCGATAGATGATTCCACTCCGGGGAATTTGTTGTATATAGGGTCGA
GACCTGAAGACGTCGCCATCAGAGCATTTGTCTGCTGTCGGGCGGGATTT
GATACCCGCTGGTCGTGTTTGTGGGATTTTTCTCACCCCAACGGGCTCAC
CTCGTTTGCGCGCTACATCGTGAAAACATTGTGCAGATCGCGAGAAACCC
TGAGGACGAGCAGTTCAACTGCTTCTTGCACATCCTGAACCATTACCTGC
TTCCCACGTCACCCGACGAGATCAACGTATCCAGCGCAATGCACAAACGC
ATCGCGCCATTCAGAACAAGG back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10151:3148..5618-
>mRNA_Ecto-sp13_S_contig10151.180.1 ID=mRNA_Ecto-sp13_S_contig10151.180.1|Name=mRNA_Ecto-sp13_S_contig10151.180.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=627bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10151:3148..5618- (Ectocarpus species13 EcNAP12_S_4_19m) ATGTTTTCCACGACCCCGTACGTGATTCGGGCCGTTCGATTGGTGGTCGC GTACAATCGAAAATATCGGCTCAAGTACGCCAGATTCGTGAAGAGAAATT ATGCTTTGGGCTTCTGGGCCGTGGCCTGCATGGGGCTCACAATCCGAGCC GGGATGTTCTTCGGGACCGATCCCGCACACTACTCCAGTGACATGCGAGA GTGTTTCTACTGGGACGACATCATTCTCGCGGGAGCAGTACTCCTTTTTG GCGCAGCGCCGATGTCGTGTTTGGCCATACGTATATCGCGAGTAAACGAC GCCTTTAAGATTCGCGAGGAACTGTGTTGTGTGTTCATCGGCTGCTCCTG CTGCGTAGCTGTACTGTGGGTGATCCAGGTGCTGGTGGAACTGGAAATAT GGCCCAATACATCCGCATTTCACGTGGTGGTCGAAGTGCAAGCGCTCCTG GTGGGGATGAACAGTGGAATTTCGGGCTTGCTCCTTCCCATGATCGCGAG AAACCCTGAGGACGAGCAGTTCAACTGCTTCTTGCACATCCTGAACCATT ACCTGCTTCCCACGTCACCCGACGAGATCAACGTATCCAGCGCAATGCAC AAACGCATCGCGCCATTCAGAACAAGG back to top