prot_Ecto-sp13_S_contig6984.17995.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig6984.17995.1
Unique Name	prot_Ecto-sp13_S_contig6984.17995.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	566

Homology

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BLAST of mRNA_Ecto-sp13_S_contig6984.17995.1 vs. uniprot
Match: D7G158_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G158_ECTSI)

HSP 1 Score: 1060 bits (2741), Expect = 0.000e+0
Identity = 521/561 (92.87%), Postives = 536/561 (95.54%), Query Frame = 0

Query:    2 SVEYVYEEVSARASSPLLPYLSAFVVFVVSAKTCGLLSVPKQGTAFRFGPGEGQQQVCDGEAVMRLGATSYLARQMLIWSESDVARVGALVVDSCARRWGIKVLVTSCGGVPLAVGTIAFLVGVIMANLFVPHSLVAFTTAADVRTAWYCLGTSFFYVVGACAVATLIGAEAGLFAVTVVIFHVYWVSLLYGNIALSFPRDHYAGGVNERDDEWEQLLKAVRHRGIGQTVLGISDEGLLAGWRCLSPAKQEEFSPLVASLVRGDKAKWEVLGDARMANGYGMFHKNWLGVDPPIRLTRKNDVIEPVYGGESMDYDFNHAAVKRKLVQVGLDTTAGTNSTNPVYGNEGTLPVFYEQEEDCLDEHGVPKLSLLCVQPFRHERCRKRQQAGTGYCRSSGSPPVTLEEAWLLLFAALWGSWSCLGWMECDGVGGEPPAKEFALVFCVFNAFLSQRVEYLWAYRATPLLIKRLIAKNTAVVRVIWILFAFFVFTEVEKASLYVILLVYLAVIVPVRWVERRNWAEDACWRWGVEDGKPVGAFPVWAETSDGDEAGQWTQSCIGLTV 562
            SVE+VYEEVSARASSPLLPYLSAFVV VVSAKTCGLLS PKQGTAFRFGPGEGQQ+VCDGEAVMRLGATSYLARQMLIWSESDVARVGALVVDSCARRWGIK LVTSCGGVPLAV TIAFLVGVIMANLFVPHSLVAFTTAADVRTA YCLGTS FYVVGACAVATLIGAEAGLFAVTVVIFHVYWVSLLYGNIALSFPRDHYAGGVNERDDEWEQLLKAVR RGIGQTVLGISDEGLLAGWR LSPAKQ+EFSPLVASLVRGDKAK EVLGD RM NGYGMFH+NW+GV PPI LTR+NDVIEPVYGGESMD+ FNHAA+KRKLVQVGLDTTAGTNSTNPVYGNEGTLPVFYEQEEDCLDEHGVPKLSLLCVQPFRH RCRK+QQAGTGYCRSSG PPVTLEEAWLLLFAALWGSWSCLGWME DGVGGEPPA E ALVFCVFNAFLSQRVEYLWAYRATPLLIKR IAKNTAVVRVIWIL AFFVFT+VEKA+LYV+LLVYLAVIVPVRWVERRNWA+D CWRWGVEDGKPVG FPVWAETSDG+EA QWT+SC GLTV
Sbjct:    3 SVEHVYEEVSARASSPLLPYLSAFVVLVVSAKTCGLLSAPKQGTAFRFGPGEGQQKVCDGEAVMRLGATSYLARQMLIWSESDVARVGALVVDSCARRWGIKDLVTSCGGVPLAVATIAFLVGVIMANLFVPHSLVAFTTAADVRTACYCLGTSLFYVVGACAVATLIGAEAGLFAVTVVIFHVYWVSLLYGNIALSFPRDHYAGGVNERDDEWEQLLKAVRRRGIGQTVLGISDEGLLAGWRYLSPAKQKEFSPLVASLVRGDKAKLEVLGDVRMENGYGMFHRNWVGVKPPIGLTRENDVIEPVYGGESMDFAFNHAALKRKLVQVGLDTTAGTNSTNPVYGNEGTLPVFYEQEEDCLDEHGVPKLSLLCVQPFRHARCRKQQQAGTGYCRSSGPPPVTLEEAWLLLFAALWGSWSCLGWMEWDGVGGEPPANESALVFCVFNAFLSQRVEYLWAYRATPLLIKRFIAKNTAVVRVIWILLAFFVFTKVEKAALYVVLLVYLAVIVPVRWVERRNWADDECWRWGVEDGKPVGTFPVWAETSDGNEAAQWTESCRGLTV 563

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BLAST of mRNA_Ecto-sp13_S_contig6984.17995.1 vs. uniprot
Match: A0A6H5KXB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXB6_9PHAE)

HSP 1 Score: 988 bits (2555), Expect = 0.000e+0
Identity = 501/609 (82.27%), Postives = 521/609 (85.55%), Query Frame = 0

Query:    1 MSVEYVYEEVSARASSPLLPYLSAFVVFVVSAKTCGLLSVPKQGTAFRFGPGEGQQQVCDGEAVMRLGATSYLARQMLIWSESDVARVGALVVDSCARRWGIKVL-----------------------------------------VTSCGGVPLAVGTIAFLVGVIMANLFVPHSLVAFTTAADVRTAWYCLGTSFFYVVGACAVATLIGAEAGLFAVTVVIFHVYWVSLLYGNIALSFPRDHYAGGVNERDDEWEQLLKAVRHRGIGQTVLGISDEGLLAGWRCLSPAKQEEFSPLVASLVRGDKAKWEVLGDARMANGYGMFHKNWLGVDPPIRLTRKNDVIEPVYGGESM---DYDFNHAAVKRKLVQVGLDTTAGTNSTNPVYGNEGTLPVFYEQEEDCLDEHGVPKLSLLCVQPFRHERCRKRQQAGTGYCRSSGSPPVTLEEAWLLLFAALWGSWSCLGWMECDGVGGEPPAKEFALVFCVFNAFLSQRVEYLWAYRATPLLIKRLIAKNTAVVRVIWILFAFFVFTEVEKASLYVILLVYLAVIVPVRWVERRNWAEDACWRWGVEDGKPVGAFPVWAETSDGDEAGQWTQSCIGLTVKCA 565
            MS E VYEEVSARASSPLL YLSAF+V VVSAKTCGLLSVPKQGTAFRFGPGE Q++VCDG+AVMRLGATSYLARQMLIWSESDVARVGALVVDSCARRWG+KVL                                         VTSCG VPLAV TIAF VGVIMANLFVPHSLVAFTTAADVRTA YCLGTS FYV+GACAVATLIGAEAGLFAVTVVIF VYWVSLLYGNIALSFP DHYAG VNE DDEWEQLLKAVRHRGIGQ VLGISDEGLLAGWR L PA+QEEF PLVASLVR DKAK EVLGD RM NGYGMFH+NW+GV+PPI LT  N+VIEPVYGGES+   DY FNHA VKRKLVQVGLDTTAGTNSTNPVYGNEGTLPVFYEQEEDCLDEHG+PKLSLLCVQPFRH RCRKRQQAGTGYCRSSG PPVTLEEAWLLLFAALWGSWSCLGWM+ DGVGGEPPA E ALVFCVFNAF SQRVEYLWAYRATPL IKR I KNTAVVRVIWILFA FVF EVEKA+LYVILLV LA+IVPVRWVERRNWA+D CWRWGVEDGKP GAFPVWAETSDG++A QWT+SC GLTVK A
Sbjct:    1 MSAENVYEEVSARASSPLLRYLSAFIVLVVSAKTCGLLSVPKQGTAFRFGPGEDQREVCDGKAVMRLGATSYLARQMLIWSESDVARVGALVVDSCARRWGVKVLSLLWGVTAAIWVYGVAWYIVLPSAAADIVDSPRTPVICKALVTSCGDVPLAVATIAFSVGVIMANLFVPHSLVAFTTAADVRTACYCLGTSLFYVMGACAVATLIGAEAGLFAVTVVIFPVYWVSLLYGNIALSFPGDHYAGRVNESDDEWEQLLKAVRHRGIGQRVLGISDEGLLAGWRYLCPARQEEFLPLVASLVREDKAKLEVLGDVRMENGYGMFHRNWVGVEPPIGLTITNNVIEPVYGGESIESIDYAFNHAGVKRKLVQVGLDTTAGTNSTNPVYGNEGTLPVFYEQEEDCLDEHGLPKLSLLCVQPFRHARCRKRQQAGTGYCRSSGPPPVTLEEAWLLLFAALWGSWSCLGWMKWDGVGGEPPANESALVFCVFNAFFSQRVEYLWAYRATPLCIKRFITKNTAVVRVIWILFAVFVFIEVEKAALYVILLVNLAMIVPVRWVERRNWADDECWRWGVEDGKPAGAFPVWAETSDGNQATQWTESCTGLTVKRA 609

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig6984.17995.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig6984.17995.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G158_ECTSI	0.000e+0	92.87	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KXB6_9PHAE	0.000e+0	82.27	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 194..437
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 147..168
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 438..457
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 128..146
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 169..174
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 175..193
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 495..514
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 469..489
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 490..494
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 104..127
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 458..468
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 41..103
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..40
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 515..565
None	No IPR available	TMHMM	TMhelix		coord: 475..492
None	No IPR available	TMHMM	TMhelix		coord: 149..171
None	No IPR available	TMHMM	TMhelix		coord: 21..40
None	No IPR available	TMHMM	TMhelix		coord: 114..136
None	No IPR available	TMHMM	TMhelix		coord: 497..514
None	No IPR available	TMHMM	TMhelix		coord: 175..197

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig6984	contig	Ecto-sp13_S_contig6984:583..2403 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig6984.17995.1	mRNA_Ecto-sp13_S_contig6984.17995.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig6984 583..2403 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig6984.17995.1 ID=prot_Ecto-sp13_S_contig6984.17995.1|Name=mRNA_Ecto-sp13_S_contig6984.17995.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=566bp
MSVEYVYEEVSARASSPLLPYLSAFVVFVVSAKTCGLLSVPKQGTAFRFG
PGEGQQQVCDGEAVMRLGATSYLARQMLIWSESDVARVGALVVDSCARRW
GIKVLVTSCGGVPLAVGTIAFLVGVIMANLFVPHSLVAFTTAADVRTAWY
CLGTSFFYVVGACAVATLIGAEAGLFAVTVVIFHVYWVSLLYGNIALSFP
RDHYAGGVNERDDEWEQLLKAVRHRGIGQTVLGISDEGLLAGWRCLSPAK
QEEFSPLVASLVRGDKAKWEVLGDARMANGYGMFHKNWLGVDPPIRLTRK
NDVIEPVYGGESMDYDFNHAAVKRKLVQVGLDTTAGTNSTNPVYGNEGTL
PVFYEQEEDCLDEHGVPKLSLLCVQPFRHERCRKRQQAGTGYCRSSGSPP
VTLEEAWLLLFAALWGSWSCLGWMECDGVGGEPPAKEFALVFCVFNAFLS
QRVEYLWAYRATPLLIKRLIAKNTAVVRVIWILFAFFVFTEVEKASLYVI
LLVYLAVIVPVRWVERRNWAEDACWRWGVEDGKPVGAFPVWAETSDGDEA
GQWTQSCIGLTVKCA*