mRNA_Ecto-sp13_S_contig6956.17963.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6956.17963.1
Unique NamemRNA_Ecto-sp13_S_contig6956.17963.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI)

HSP 1 Score: 662 bits (1708), Expect = 1.370e-237
Identity = 359/409 (87.78%), Postives = 371/409 (90.71%), Query Frame = 1
Query:    1 GRLPRGGMRDYGGXXXXXXXXXRQ-PWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVLNLFTGISLYNNSRGPSYTYNSGTSGRASPEGARRETRQQSPNLPAAYDIDSDPEAEEAALQEALRRSLLDSTAGGGADHSLRRENAGSVTNNPGSRSRPIENGAVAATEFLGPXXXXXXXXXXXXXXXXXXXXVAPDELRRRRLRRLGAG 1224
            GRLPRGGMRDYGGXXXXXXXX R+ PWALILALRL+HQISQLQHKPPLTLALMAGMSALHLKPDIF+DLFG KGVFEWSWLTGGFDHIRNVCLLPASIL TYERTGE+EIRRLL+SPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHAC VGFSGVLFALKYVLSRRSPGVT+VMGFSVHTRYA WLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRV+NLFTGISLYNN RG SYTYNSGTSGRASPEGARRETRQQSPN PAAYDIDSDPEAEEAALQEALRRSLLDST GGGA  +LRR+N  S  +NPGSRSRPI + AVAATEFLGP                    +APDELRRRRLRRLGAG
Sbjct:    9 GRLPRGGMRDYGGXXXXXXXXQRRRPWALILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRKGVFEWSWLTGGFDHIRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTSGRASPEGARRETRQQSPNPPAAYDIDSDPEAEEAALQEALRRSLLDSTRGGGAGDNLRRDNGNSAADNPGSRSRPIGDDAVAATEFLGPAPTAPPPEENAGGYGAGGGEIAPDELRRRRLRRLGAG 417          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA)

HSP 1 Score: 173 bits (439), Expect = 5.360e-47
Identity = 139/339 (41.00%), Postives = 184/339 (54.28%), Query Frame = 1
Query:   73 PWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMG-FSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIV-------LRVLNLFTG-ISLYNN--SRGPSYTYNSGTSGRASPE-----------------GARRETRQQSPNLPAAYDIDSDPEAEEAALQEALRRSLLDSTAGGGA 1005
            P+A  +AL L+++  QL +KPP T  L+A  + +HL P          GV     L G +     VCL PA ++      GE++  RL  S  +HGDD+HL+YNM S L+KGVSLE TMGT AFA L+ F    S TL+++ A   + +   P   ++C VGFS VLFALKYV + R P   T +G F + +R+A+W EL+LI V+VPNASFLGHLCGILAGVL+V    V       L  L +  G    Y+    RG  YTY  GTSG A+                   GA  ++        AA+++    E  +A LQEALRRSL +   GG A
Sbjct:   13 PYATGVALDLLNRFLQLPYKPPFTCFLIALNACIHLYPAAL------AGVLPARLLFGDYT---KVCLKPAKVVKEL-LNGEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPG-FNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVAYTAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGTSGTAAAXXXXXXXXXXXRPPAFAPGAASDS--------AAFEV----EDADAQLQEALRRSLEEVRLGGAA 328          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A7S2TY11_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA)

HSP 1 Score: 167 bits (423), Expect = 2.620e-45
Identity = 121/306 (39.54%), Postives = 167/306 (54.58%), Query Frame = 1
Query:   73 PWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASIL--GTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVLNLFTGISLYNNSRGPSYTYNSGTSGRASPEGARRETRQQSPNLPAAYDIDSDPEAEEAALQEALRRSLLD 984
            P  ++L ++L  QI+ L++KPP TLALMA  SA++L              +E+S        + +VC+ PA IL  G +        +RL++S F H DD HLYYNM+S L KGV LE   GT+ F G+    L  S +  + +AW++  +    S M  C VGFS VLFA K VL+  SP +T V G SV  +YA WLELV+IS++ PNASFLGHLCGILAG++YV     + + ++F+  S    S  P+   +  T  R      R+  RQ               E E+A L EA+RRS +D
Sbjct:   15 PRMMMLLMQLGRQIANLEYKPPATLALMALNSAVYL--------------YEFSLPF----RVPDVCMHPAKILFGGDW--------KRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVYVTGGRAIMLGSIFSAAS----SSAPASAPSRHTIQRGILRPNRQRRRQ---------------EEEDADLAEAMRRSRMD 275          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A225X2V2_9STRA (Serine protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.870e-45
Identity = 97/230 (42.17%), Postives = 134/230 (58.26%), Query Frame = 1
Query:   67 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVP 756
            R    + L L L+ QI QL+ KPP+TL LMA M  +H +     +LF                      L P  +L  ++ T      R++ S  +HGDD HLY+NM SFL KG +LE  +G+  F   + + LL    L+++ A VL   F +P P+H C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF+GH+CGILAG ++V  P
Sbjct:   16 RDGQGVALMLMLVRQIQQLERKPPVTLGLMALMYGIHFQKTQTPELFAPYS------------------LCPDRVLSHWDWT------RIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSP 221          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A6A4D013_9STRA (Rhomboid domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D013_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.010e-44
Identity = 95/225 (42.22%), Postives = 134/225 (59.56%), Query Frame = 1
Query:   82 LILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVP 756
            L L L L+ QI QL+ KPP+TL LMA M  LH + +   +LF                      L P  +L  ++       +RL+ S  +H DD HLY+NM SFL KG +LE  +G+  F   + + L+    L+++ A +L   F +P+P+H C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF+GH+CGILAG ++V  P
Sbjct:   24 LALMLMLVRQIQQLERKPPVTLGLMALMYGLHFQKNQTPELFAPFS------------------LCPDRVLSNWDW------KRLVASGLIHVDDWHLYHNMISFLWKGCNLEYKLGSVRFLLTVGYLLVLCHVLVVMVALILATGFQMPAPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYSP 224          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A482UPC4_9ARCH (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPC4_9ARCH)

HSP 1 Score: 162 bits (411), Expect = 3.870e-44
Identity = 93/237 (39.24%), Postives = 143/237 (60.34%), Query Frame = 1
Query:   73 PWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMH-----ACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLR 768
            P  + L ++++ Q+ +L +KPP+TL L+A     H+ PD +             +L     ++R  C+ P+ I+ +      +   R++++ F+H DDMHLYYNM S L KGV LE   G+  F  L+ +SLLAS  L+++ ++V   V+ V   +H     +C +GFS VLF+LKYVL++ SP  T+++GF V +++AAW ELVL S++ P  SF+GHL GILAG LYV +  V R
Sbjct:   16 PVVVSLLIQILSQLEKLPYKPPVTLGLLAMNIIAHIHPDPY-------------FLDYSLTNVRQNCIWPSLIVSSLTNNHSILWNRIVLAGFMHADDMHLYYNMLSLLWKGVQLEQQFGSFQFGILVVYSLLASHILLVVMSYV---VYAVTQNIHISSYDSCAIGFSAVLFSLKYVLNQNSPAYTSILGFQVPSKWAAWAELVLASLLSPQVSFIGHLAGILAGYLYVHMDSVAR 236          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A329RKV0_9STRA (Rhomboid domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RKV0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 7.520e-44
Identity = 97/232 (41.81%), Postives = 133/232 (57.33%), Query Frame = 1
Query:   67 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIV 762
            R    + L L L+ QI QL+ KPP+TL LMA M  LH +     +LF                      L P  ++  ++ T      R++VS  +H DD HLY+NM SFL KG +LE   G+  F   + + LL    L+++ A VL   F +P P+H C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF GH+CGILAG ++V  P +
Sbjct:   18 RNGQGIALMLMLLRQIQQLERKPPVTLGLMALMYGLHFQKQQTPELFAPYS------------------LCPDRVISHWDLT------RIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKAGSVRFLLTVGYLLLLCHVLVVVVALVLATGFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFTGHMCGILAGYIFVYSPAI 225          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: M4B4F7_HYAAE (Rhomboid domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4F7_HYAAE)

HSP 1 Score: 164 bits (416), Expect = 7.520e-44
Identity = 96/228 (42.11%), Postives = 135/228 (59.21%), Query Frame = 1
Query:   67 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVE 750
            R   A+ L L L+ Q+ QL+ KPP+TL LMA M  L+ + +I  +LF                H   +C  P  +L  +E      + R++ S  +H D+ HLY+NM SFL KG +LE  +G+  F   + F L  S TL++  A +L   F +P P+H C+VGFS VLFALK +L+  SP  +T+ GF V T+YAAWLELV I ++VP +SF+GH+CGILAG + V 
Sbjct:   18 RNNHAIALMLVLLRQVQQLERKPPVTLGLMALMCGLYYQQNITPELF----------------HPYLLC--PDRVLNQFE------LMRIVASGLIHADEWHLYHNMISFLWKGYNLEYKLGSVQFLLTVGFLLALSHTLVIAVALILATCFQMPGPLHQCSVGFSSVLFALKVILNHDSPAFSTIYGFCVPTKYAAWLELVAIYLLVPQSSFMGHMCGILAGYICVR 221          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A2P4XD54_9STRA (Serine protease family S54 n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XD54_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.170e-43
Identity = 95/238 (39.92%), Postives = 136/238 (57.14%), Query Frame = 1
Query:   67 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLK----PDIFE--DLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIV 762
            R    + L L L+ Q+ QL+ KPP+TL LMA M  LH +    P++F    L   + +  W W+                              R++ S  +H DD HLY+NM SFL KG +LE  MG+  F   + + L+    L+++ A VL + F +P P+H C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF+GH+CGILAG ++V  P++
Sbjct:   16 RDGQGIALMLMLVRQVQQLERKPPVTLGLMALMYGLHFQKMQTPELFAPYSLCPDRVLSHWDWM------------------------------RIVASGLIHVDDWHLYHNMISFLWKGYNLEDKMGSVRFLLTVGYLLVLCHVLVVVVALVLAMGFQMPEPLHQCSVGFSGVLFALKVLLNHNSPTFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYFPVM 223          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: W2QA40_PHYPN (Rhomboid domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2QA40_PHYPN)

HSP 1 Score: 163 bits (412), Expect = 2.420e-43
Identity = 98/241 (40.66%), Postives = 138/241 (57.26%), Query Frame = 1
Query:   67 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVLNLFTG 789
            R    + L L L+ QI QL+ KPP+TL LMA M  LH +     ++F                      L P  ++G ++ T      R++VS  +H DD HLY+NM SFL KG +LE  MG+  F   +   L+    L+++ A VL   F +P P++ C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF+GH+CGILAG +YV    +  +L+   G
Sbjct:   18 RNGQGIALMLMLMQQIQQLERKPPVTLGLMALMYGLHFQKQQTPEIFAPYS------------------LCPDRVIGHWDLT------RIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKMGSVRFLLTVGCLLVLCHVLVVIVAVVLATGFQMPGPLYQCSVGFSGVLFALKVLLNHNSPTFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIYVYSSAMQSILSSGAG 234          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN1_ECTSI1.370e-23787.78Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CHG7_9STRA5.360e-4741.00Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2TY11_9EUKA2.620e-4539.54Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A225X2V2_9STRA2.870e-4542.17Serine protease n=1 Tax=Phytophthora megakarya Tax... [more]
A0A6A4D013_9STRA2.010e-4442.22Rhomboid domain-containing protein n=3 Tax=Phytoph... [more]
A0A482UPC4_9ARCH3.870e-4439.24Rhomboid family intramembrane serine protease (Fra... [more]
A0A329RKV0_9STRA7.520e-4441.81Rhomboid domain-containing protein n=2 Tax=Phytoph... [more]
M4B4F7_HYAAE7.520e-4442.11Rhomboid domain-containing protein n=1 Tax=Hyalope... [more]
A0A2P4XD54_9STRA2.170e-4339.92Serine protease family S54 n=2 Tax=Phytophthora pa... [more]
W2QA40_PHYPN2.420e-4340.66Rhomboid domain-containing protein n=17 Tax=Phytop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6956contigEcto-sp13_S_contig6956:3..2401 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score654.4
Seed ortholog evalue3.3e-185
Seed eggNOG ortholog2880.D8LJN1
Preferred nameRHBDD1
Model size1230
KEGG koko:K09651
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006508,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006986,GO:0007276,GO:0007283,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010604,GO:0010628,GO:0010941,GO:0010954,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019222,GO:0019538,GO:0019953,GO:0022412,GO:0022414,GO:0030154,GO:0030162,GO:0030163,GO:0030176,GO:0030970,GO:0031224,GO:0031227,GO:0031293,GO:0031323,GO:0031325,GO:0031984,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032527,GO:0032879,GO:0033036,GO:0033554,GO:0033619,GO:0034613,GO:0034620,GO:0034644,GO:0034976,GO:0035966,GO:0035967,GO:0036211,GO:0036503,GO:0042175,GO:0042176,GO:0042221,GO:0042886,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044322,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045184,GO:0045732,GO:0045862,GO:0046907,GO:0048232,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048609,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0060255,GO:0060548,GO:0065007,GO:0070011,GO:0070613,GO:0070727,GO:0070887,GO:0071214,GO:0071310,GO:0071478,GO:0071482,GO:0071702,GO:0071704,GO:0071705,GO:0080090,GO:0098827,GO:0104004,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1903317,GO:1903319,GO:1903513,GO:1904211
Exons3
EggNOG free text desc.serine-type endopeptidase activity
EggNOG OGsKOG2632@1,KOG2632@2759
Ec32 ortholog descriptionPeptidase S54, rhomboid domain
Ec32 orthologEc-17_002690.1
Cds size1209
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463955.4268613-UTR-Ecto-sp13_S_contig6956:2..231681463955.4268613-UTR-Ecto-sp13_S_contig6956:2..23Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6956 3..23 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463955.4801593-CDS-Ecto-sp13_S_contig6956:23..3101681463955.4801593-CDS-Ecto-sp13_S_contig6956:23..310Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6956 24..310 +
1681463955.4902406-CDS-Ecto-sp13_S_contig6956:741..10541681463955.4902406-CDS-Ecto-sp13_S_contig6956:741..1054Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6956 742..1054 +
1681463955.501408-CDS-Ecto-sp13_S_contig6956:1792..24011681463955.501408-CDS-Ecto-sp13_S_contig6956:1792..2401Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6956 1793..2401 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6956.17963.1prot_Ecto-sp13_S_contig6956.17963.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6956 24..2401 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6956.17963.1

>prot_Ecto-sp13_S_contig6956.17963.1 ID=prot_Ecto-sp13_S_contig6956.17963.1|Name=mRNA_Ecto-sp13_S_contig6956.17963.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=403bp
MRDYGGGGGGGRGRRRQPWALILALRLIHQISQLQHKPPLTLALMAGMSA
LHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGEL
EIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLL
ASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTT
VMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRV
LNLFTGISLYNNSRGPSYTYNSGTSGRASPEGARRETRQQSPNLPAAYDI
DSDPEAEEAALQEALRRSLLDSTAGGGADHSLRRENAGSVTNNPGSRSRP
IENGAVAATEFLGPPPTAPPPEEDAGGYGAGGGQVAPDELRRRRLRRLGA
GT*
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mRNA from alignment at Ecto-sp13_S_contig6956:3..2401+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6956.17963.1 ID=mRNA_Ecto-sp13_S_contig6956.17963.1|Name=mRNA_Ecto-sp13_S_contig6956.17963.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2399bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6956:3..2401+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCCGGCTTCCTCGTGGAGGAATGCGTGATTACGGTGGTGGTGGTGGTGG TGGGCGAGGGCGACGCCGTCAGCCGTGGGCCCTGATCCTCGCCCTACGGC TTATTCATCAGATCTCTCAGCTCCAGCACAAGCCGCCCTTGACCCTGGCC CTTATGGCGGGCATGTCTGCCCTGCACTTGAAGCCCGACATCTTTGAGGA CCTGTTCGGCAGCAAGGGGGTGTTCGAGTGGAGCTGGCTTACGGGAGGTT TCGATCACATTCGGAATGTTTGTCTGCTGCCTGCGTCTATTCTGGGTACG TACGAACGGTGAGTGAGAATGGGCTATGAACTACTGCACCCCGTGGGTTA GCGTATGATTCATCAAAGCGTGTCGTCGGTTGTGTACAATTAGGTACGTC TATCGTGTGCCTACGTACATGTAGGTCCTGTACCCTTTGCATTGTCGGAA AGCTTTCACATTGAATCTTGGCAGTGAAAGATGATACTGCCGTGCTATTC TGCTGCACTCACGTCGCACGTTTTCGCGGTGATGTTGGTGGTTCGCCGTA CCTGGCCAACCAAAGCGGTAGCACGACATTGCGGCCATGCTCGTATTCTG GACTTCTTGAGAACGAAGGCTTGCCTCATGGTTCATACCTTAATTTGCCC GTGTATGGAGATTAACACCTCTGCAAACACCCTTGATTTTGGTGGAGTCT TTGCTCACACTACTCCTGCCCCGCGCTCTCTCTTGACAGAACGGGTGAGC TGGAGATTCGACGCTTGCTGGTGTCCCCGTTCGTGCACGGAGACGACATG CATCTGTACTACAACATGGCTTCCTTCCTGCTCAAAGGGGTGTCGCTGGA GCTCACCATGGGGACGCAGGCTTTCGCCGGGCTCTTGTCCTTCAGCCTCC TCGCCTCTCAGACGCTCATGATGCTCTCCGCCTGGGTCCTATTAGTCGTG TTCGACGTGCCATCACCTATGCACGCCTGTACGGTCGGCTTCAGCGGCGT GCTGTTCGCGCTGAAGTACGTCTTGTCTCGACGGTCCCCAGGGGTCACAA CGGTGAGTGGCTGGGCACAACATTGCTCGTTTGTTGATCTATTTTTGATT ACTTGGTTTAATTTGGAGCACGCGGTAGAACAAGTCCCCCTCTCAAGGAG GCGTTGTTTCAAGCGCGTCGGCTTCGAACCCCCCATAGGTCAGTGTCCCT CAGCGAGCAGCCTTGGAACGAAAGAAGTTGCGTTGCTTTTTCTGGTTGAC GGGTGTACCCACTGGCGTCTGGCCAACTGACATCGATTCTTACGTCATGG GTTGAGCGGTTTGTACGTACTTCACACAAAGAGAACGTGGGCACGAACGG TCTATCAGGAGTGGGAACTTCCACCCCGTTGGCGCCAGCTACAAGAATCA ATACCGTACGACACAAGATATCACACTCCCTGGACAGATTGTCAAAGCTC GATTACTCCGCGACGAAGAGGATGCATTGACGAAACGAAACGTTTCCGGA GAGCTCTCGACCAGACGGTTTCAACTCCGCCGTTTTCGGTGCTGCGACTC TTTCTGCTGTTGATCAGTCGAGCCTTGAAAATCGGACAAGGGGGTGTGTT ATCTTAAGTCATATACCGTAGGTTAGACCGTGGCGGAAAGCACGCGCTAA GTGGTGCTCAGGTTCGGTGCCCCATACGGGCCTCTGACGGGATTGCGGCG GACTTCTCAATCGCGTGTAATGTGCTTGAAAGTACGTAATCCCAACGTGG CGTATTTGCTTCCTACCCTCTCCGCAATATGTATGCACAGGTGATGGGAT TTAGCGTGCACACCCGTTACGCCGCCTGGCTGGAGCTTGTGCTGATTTCT GTCATGGTCCCGAACGCGTCCTTCCTGGGTCATCTGTGTGGGATCTTAGC CGGCGTGCTGTACGTCGAAGTGCCGATCGTCCTTCGCGTGCTTAACCTCT TCACGGGAATCTCGCTCTACAACAACAGCCGGGGTCCTTCGTACACGTAC AACAGCGGCACTAGCGGCAGGGCTAGTCCCGAAGGGGCGAGAAGAGAAAC CCGGCAGCAGTCGCCGAACCTCCCCGCTGCGTACGACATAGACAGCGACC CCGAGGCGGAAGAGGCGGCTTTGCAAGAGGCACTACGGCGTTCTCTGCTA GACAGCACGGCGGGTGGCGGTGCTGACCACAGTTTGAGGCGGGAAAACGC CGGAAGCGTCACTAACAACCCTGGGTCAAGGTCTCGACCAATTGAGAATG GTGCGGTTGCAGCCACAGAATTTTTGGGGCCGCCACCGACCGCACCACCT CCGGAAGAGGACGCCGGTGGCTACGGAGCAGGGGGCGGCCAAGTAGCACC GGATGAGTTGCGTAGACGACGCCTGCGACGCCTTGGCGCGGGCACGTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6956:3..2401+

>mRNA_Ecto-sp13_S_contig6956.17963.1 ID=mRNA_Ecto-sp13_S_contig6956.17963.1|Name=mRNA_Ecto-sp13_S_contig6956.17963.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1209bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6956:3..2401+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGTGATTACGGTGGTGGTGGTGGTGGTGGGCGAGGGCGACGCCGTCA
GCCGTGGGCCCTGATCCTCGCCCTACGGCTTATTCATCAGATCTCTCAGC
TCCAGCACAAGCCGCCCTTGACCCTGGCCCTTATGGCGGGCATGTCTGCC
CTGCACTTGAAGCCCGACATCTTTGAGGACCTGTTCGGCAGCAAGGGGGT
GTTCGAGTGGAGCTGGCTTACGGGAGGTTTCGATCACATTCGGAATGTTT
GTCTGCTGCCTGCGTCTATTCTGGGTACGTACGAACGAACGGGTGAGCTG
GAGATTCGACGCTTGCTGGTGTCCCCGTTCGTGCACGGAGACGACATGCA
TCTGTACTACAACATGGCTTCCTTCCTGCTCAAAGGGGTGTCGCTGGAGC
TCACCATGGGGACGCAGGCTTTCGCCGGGCTCTTGTCCTTCAGCCTCCTC
GCCTCTCAGACGCTCATGATGCTCTCCGCCTGGGTCCTATTAGTCGTGTT
CGACGTGCCATCACCTATGCACGCCTGTACGGTCGGCTTCAGCGGCGTGC
TGTTCGCGCTGAAGTACGTCTTGTCTCGACGGTCCCCAGGGGTCACAACG
GTGATGGGATTTAGCGTGCACACCCGTTACGCCGCCTGGCTGGAGCTTGT
GCTGATTTCTGTCATGGTCCCGAACGCGTCCTTCCTGGGTCATCTGTGTG
GGATCTTAGCCGGCGTGCTGTACGTCGAAGTGCCGATCGTCCTTCGCGTG
CTTAACCTCTTCACGGGAATCTCGCTCTACAACAACAGCCGGGGTCCTTC
GTACACGTACAACAGCGGCACTAGCGGCAGGGCTAGTCCCGAAGGGGCGA
GAAGAGAAACCCGGCAGCAGTCGCCGAACCTCCCCGCTGCGTACGACATA
GACAGCGACCCCGAGGCGGAAGAGGCGGCTTTGCAAGAGGCACTACGGCG
TTCTCTGCTAGACAGCACGGCGGGTGGCGGTGCTGACCACAGTTTGAGGC
GGGAAAACGCCGGAAGCGTCACTAACAACCCTGGGTCAAGGTCTCGACCA
ATTGAGAATGGTGCGGTTGCAGCCACAGAATTTTTGGGGCCGCCACCGAC
CGCACCACCTCCGGAAGAGGACGCCGGTGGCTACGGAGCAGGGGGCGGCC
AAGTAGCACCGGATGAGTTGCGTAGACGACGCCTGCGACGCCTTGGCGCG
GGCACGTGA
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