prot_Ecto-sp13_S_contig6956.17963.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6956.17963.1
Unique Nameprot_Ecto-sp13_S_contig6956.17963.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length403
Homology
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI)

HSP 1 Score: 649 bits (1673), Expect = 2.220e-232
Identity = 352/402 (87.56%), Postives = 364/402 (90.55%), Query Frame = 0
Query:    1 MRDYGGXXXXXXXXXRQ-PWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVLNLFTGISLYNNSRGPSYTYNSGTSGRASPEGARRETRQQSPNLPAAYDIDSDPEAEEAALQEALRRSLLDSTAGGGADHSLRRENAGSVTNNPGSRSRPIENGAVAATEFLGPXXXXXXXXXXXXXXXXXXXXVAPDELRRRRLRRLGAG 401
            MRDYGGXXXXXXXX R+ PWALILALRL+HQISQLQHKPPLTLALMAGMSALHLKPDIF+DLFG KGVFEWSWLTGGFDHIRNVCLLPASIL TYERTGE+EIRRLL+SPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHAC VGFSGVLFALKYVLSRRSPGVT+VMGFSVHTRYA WLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRV+NLFTGISLYNN RG SYTYNSGTSGRASPEGARRETRQQSPN PAAYDIDSDPEAEEAALQEALRRSLLDST GGGA  +LRR+N  S  +NPGSRSRPI + AVAATEFLGP                    +APDELRRRRLRRLGAG
Sbjct:   16 MRDYGGXXXXXXXXQRRRPWALILALRLVHQISQLQHKPPLTLALMAGMSALHLKPDIFKDLFGRKGVFEWSWLTGGFDHIRNVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTSGRASPEGARRETRQQSPNPPAAYDIDSDPEAEEAALQEALRRSLLDSTRGGGAGDNLRRDNGNSAADNPGSRSRPIGDDAVAATEFLGPAPTAPPPEENAGGYGAGGGEIAPDELRRRRLRRLGAG 417          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.510e-47
Identity = 139/339 (41.00%), Postives = 184/339 (54.28%), Query Frame = 0
Query:   18 PWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMG-FSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIV-------LRVLNLFTG-ISLYNN--SRGPSYTYNSGTSGRASPE-----------------GARRETRQQSPNLPAAYDIDSDPEAEEAALQEALRRSLLDSTAGGGA 328
            P+A  +AL L+++  QL +KPP T  L+A  + +HL P          GV     L G +     VCL PA ++      GE++  RL  S  +HGDD+HL+YNM S L+KGVSLE TMGT AFA L+ F    S TL+++ A   + +   P   ++C VGFS VLFALKYV + R P   T +G F + +R+A+W EL+LI V+VPNASFLGHLCGILAGVL+V    V       L  L +  G    Y+    RG  YTY  GTSG A+                   GA  ++        AA+++    E  +A LQEALRRSL +   GG A
Sbjct:   13 PYATGVALDLLNRFLQLPYKPPFTCFLIALNACIHLYPAAL------AGVLPARLLFGDYT---KVCLKPAKVVKEL-LNGEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPG-FNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVAYTAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGTSGTAAAXXXXXXXXXXXRPPAFAPGAASDS--------AAFEV----EDADAQLQEALRRSLEEVRLGGAA 328          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A7S2TY11_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA)

HSP 1 Score: 167 bits (423), Expect = 2.210e-45
Identity = 121/306 (39.54%), Postives = 167/306 (54.58%), Query Frame = 0
Query:   18 PWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASIL--GTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVLNLFTGISLYNNSRGPSYTYNSGTSGRASPEGARRETRQQSPNLPAAYDIDSDPEAEEAALQEALRRSLLD 321
            P  ++L ++L  QI+ L++KPP TLALMA  SA++L              +E+S        + +VC+ PA IL  G +        +RL++S F H DD HLYYNM+S L KGV LE   GT+ F G+    L  S +  + +AW++  +    S M  C VGFS VLFA K VL+  SP +T V G SV  +YA WLELV+IS++ PNASFLGHLCGILAG++YV     + + ++F+  S    S  P+   +  T  R      R+  RQ               E E+A L EA+RRS +D
Sbjct:   15 PRMMMLLMQLGRQIANLEYKPPATLALMALNSAVYL--------------YEFSLPF----RVPDVCMHPAKILFGGDW--------KRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVYVTGGRAIMLGSIFSAAS----SSAPASAPSRHTIQRGILRPNRQRRRQ---------------EEEDADLAEAMRRSRMD 275          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A225X2V2_9STRA (Serine protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.420e-45
Identity = 97/230 (42.17%), Postives = 134/230 (58.26%), Query Frame = 0
Query:   16 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVP 245
            R    + L L L+ QI QL+ KPP+TL LMA M  +H +     +LF                      L P  +L  ++ T      R++ S  +HGDD HLY+NM SFL KG +LE  +G+  F   + + LL    L+++ A VL   F +P P+H C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF+GH+CGILAG ++V  P
Sbjct:   16 RDGQGVALMLMLVRQIQQLERKPPVTLGLMALMYGIHFQKTQTPELFAPYS------------------LCPDRVLSHWDWT------RIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSP 221          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A6A4D013_9STRA (Rhomboid domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D013_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.700e-44
Identity = 95/225 (42.22%), Postives = 134/225 (59.56%), Query Frame = 0
Query:   21 LILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVP 245
            L L L L+ QI QL+ KPP+TL LMA M  LH + +   +LF                      L P  +L  ++       +RL+ S  +H DD HLY+NM SFL KG +LE  +G+  F   + + L+    L+++ A +L   F +P+P+H C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF+GH+CGILAG ++V  P
Sbjct:   24 LALMLMLVRQIQQLERKPPVTLGLMALMYGLHFQKNQTPELFAPFS------------------LCPDRVLSNWDW------KRLVASGLIHVDDWHLYHNMISFLWKGCNLEYKLGSVRFLLTVGYLLVLCHVLVVMVALILATGFQMPAPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYSP 224          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A482UPC4_9ARCH (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPC4_9ARCH)

HSP 1 Score: 162 bits (411), Expect = 3.290e-44
Identity = 93/237 (39.24%), Postives = 143/237 (60.34%), Query Frame = 0
Query:   18 PWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMH-----ACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLR 249
            P  + L ++++ Q+ +L +KPP+TL L+A     H+ PD +             +L     ++R  C+ P+ I+ +      +   R++++ F+H DDMHLYYNM S L KGV LE   G+  F  L+ +SLLAS  L+++ ++V   V+ V   +H     +C +GFS VLF+LKYVL++ SP  T+++GF V +++AAW ELVL S++ P  SF+GHL GILAG LYV +  V R
Sbjct:   16 PVVVSLLIQILSQLEKLPYKPPVTLGLLAMNIIAHIHPDPY-------------FLDYSLTNVRQNCIWPSLIVSSLTNNHSILWNRIVLAGFMHADDMHLYYNMLSLLWKGVQLEQQFGSFQFGILVVYSLLASHILLVVMSYV---VYAVTQNIHISSYDSCAIGFSAVLFSLKYVLNQNSPAYTSILGFQVPSKWAAWAELVLASLLSPQVSFIGHLAGILAGYLYVHMDSVAR 236          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A329RKV0_9STRA (Rhomboid domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RKV0_9STRA)

HSP 1 Score: 164 bits (416), Expect = 6.370e-44
Identity = 97/232 (41.81%), Postives = 133/232 (57.33%), Query Frame = 0
Query:   16 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIV 247
            R    + L L L+ QI QL+ KPP+TL LMA M  LH +     +LF                      L P  ++  ++ T      R++VS  +H DD HLY+NM SFL KG +LE   G+  F   + + LL    L+++ A VL   F +P P+H C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF GH+CGILAG ++V  P +
Sbjct:   18 RNGQGIALMLMLLRQIQQLERKPPVTLGLMALMYGLHFQKQQTPELFAPYS------------------LCPDRVISHWDLT------RIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKAGSVRFLLTVGYLLLLCHVLVVVVALVLATGFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFTGHMCGILAGYIFVYSPAI 225          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: M4B4F7_HYAAE (Rhomboid domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4F7_HYAAE)

HSP 1 Score: 164 bits (416), Expect = 6.370e-44
Identity = 96/228 (42.11%), Postives = 135/228 (59.21%), Query Frame = 0
Query:   16 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVE 243
            R   A+ L L L+ Q+ QL+ KPP+TL LMA M  L+ + +I  +LF                H   +C  P  +L  +E      + R++ S  +H D+ HLY+NM SFL KG +LE  +G+  F   + F L  S TL++  A +L   F +P P+H C+VGFS VLFALK +L+  SP  +T+ GF V T+YAAWLELV I ++VP +SF+GH+CGILAG + V 
Sbjct:   18 RNNHAIALMLVLLRQVQQLERKPPVTLGLMALMCGLYYQQNITPELF----------------HPYLLC--PDRVLNQFE------LMRIVASGLIHADEWHLYHNMISFLWKGYNLEYKLGSVQFLLTVGFLLALSHTLVIAVALILATCFQMPGPLHQCSVGFSSVLFALKVILNHDSPAFSTIYGFCVPTKYAAWLELVAIYLLVPQSSFMGHMCGILAGYICVR 221          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: A0A2P4XD54_9STRA (Serine protease family S54 n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XD54_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.840e-43
Identity = 95/238 (39.92%), Postives = 136/238 (57.14%), Query Frame = 0
Query:   16 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLK----PDIFE--DLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIV 247
            R    + L L L+ Q+ QL+ KPP+TL LMA M  LH +    P++F    L   + +  W W+                              R++ S  +H DD HLY+NM SFL KG +LE  MG+  F   + + L+    L+++ A VL + F +P P+H C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF+GH+CGILAG ++V  P++
Sbjct:   16 RDGQGIALMLMLVRQVQQLERKPPVTLGLMALMYGLHFQKMQTPELFAPYSLCPDRVLSHWDWM------------------------------RIVASGLIHVDDWHLYHNMISFLWKGYNLEDKMGSVRFLLTVGYLLVLCHVLVVVVALVLAMGFQMPEPLHQCSVGFSGVLFALKVLLNHNSPTFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYFPVM 223          
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Match: W2QA40_PHYPN (Rhomboid domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=W2QA40_PHYPN)

HSP 1 Score: 163 bits (412), Expect = 2.050e-43
Identity = 98/241 (40.66%), Postives = 138/241 (57.26%), Query Frame = 0
Query:   16 RQPWALILALRLIHQISQLQHKPPLTLALMAGMSALHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGELEIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTTVMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVLNLFTG 256
            R    + L L L+ QI QL+ KPP+TL LMA M  LH +     ++F                      L P  ++G ++ T      R++VS  +H DD HLY+NM SFL KG +LE  MG+  F   +   L+    L+++ A VL   F +P P++ C+VGFSGVLFALK +L+  SP  ++V GF V T+YAAWLELV+I  +VP +SF+GH+CGILAG +YV    +  +L+   G
Sbjct:   18 RNGQGIALMLMLMQQIQQLERKPPVTLGLMALMYGLHFQKQQTPEIFAPYS------------------LCPDRVIGHWDLT------RIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKMGSVRFLLTVGCLLVLCHVLVVIVAVVLATGFQMPGPLYQCSVGFSGVLFALKVLLNHNSPTFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIYVYSSAMQSILSSGAG 234          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6956.17963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN1_ECTSI2.220e-23287.56Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CHG7_9STRA4.510e-4741.00Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2TY11_9EUKA2.210e-4539.54Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A225X2V2_9STRA2.420e-4542.17Serine protease n=1 Tax=Phytophthora megakarya Tax... [more]
A0A6A4D013_9STRA1.700e-4442.22Rhomboid domain-containing protein n=3 Tax=Phytoph... [more]
A0A482UPC4_9ARCH3.290e-4439.24Rhomboid family intramembrane serine protease (Fra... [more]
A0A329RKV0_9STRA6.370e-4441.81Rhomboid domain-containing protein n=2 Tax=Phytoph... [more]
M4B4F7_HYAAE6.370e-4442.11Rhomboid domain-containing protein n=1 Tax=Hyalope... [more]
A0A2P4XD54_9STRA1.840e-4339.92Serine protease family S54 n=2 Tax=Phytophthora pa... [more]
W2QA40_PHYPN2.050e-4340.66Rhomboid domain-containing protein n=17 Tax=Phytop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 68..244
e-value: 2.4E-12
score: 48.9
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 101..242
e-value: 6.6E-17
score: 61.9
NoneNo IPR availablePANTHERPTHR43066RHOMBOID-RELATED PROTEINcoord: 13..253
NoneNo IPR availablePANTHERPTHR43066:SF1RHOMBOID-RELATED PROTEIN 4coord: 13..253
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 243..402
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..171
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..140
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 212..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..166
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..211
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..191
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 38..243
NoneNo IPR availableTMHMMTMhelixcoord: 213..235
NoneNo IPR availableTMHMMTMhelixcoord: 170..192
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 239..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6956contigEcto-sp13_S_contig6956:24..2401 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6956.17963.1mRNA_Ecto-sp13_S_contig6956.17963.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6956 3..2401 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6956.17963.1 ID=prot_Ecto-sp13_S_contig6956.17963.1|Name=mRNA_Ecto-sp13_S_contig6956.17963.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=403bp
MRDYGGGGGGGRGRRRQPWALILALRLIHQISQLQHKPPLTLALMAGMSA
LHLKPDIFEDLFGSKGVFEWSWLTGGFDHIRNVCLLPASILGTYERTGEL
EIRRLLVSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLL
ASQTLMMLSAWVLLVVFDVPSPMHACTVGFSGVLFALKYVLSRRSPGVTT
VMGFSVHTRYAAWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRV
LNLFTGISLYNNSRGPSYTYNSGTSGRASPEGARRETRQQSPNLPAAYDI
DSDPEAEEAALQEALRRSLLDSTAGGGADHSLRRENAGSVTNNPGSRSRP
IENGAVAATEFLGPPPTAPPPEEDAGGYGAGGGQVAPDELRRRRLRRLGA
GT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom