prot_Ecto-sp13_S_contig69536.17959.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69536.17959.1
Unique Nameprot_Ecto-sp13_S_contig69536.17959.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length88
Homology
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BLAST of mRNA_Ecto-sp13_S_contig69536.17959.1 vs. uniprot
Match: A0A6H5JFY5_9PHAE (Protein-ribulosamine 3-kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY5_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 4.570e-36
Identity = 72/82 (87.80%), Postives = 74/82 (90.24%), Query Frame = 0 
Query:    1 MVARGTLLSVATGLTLNQAPRVACFCTVVRPSAHRARVHQGRATAVQHGSSRWNSNGFRGGARLGSAASFVRLRAVEEPAAA 82
            MVARG+LLSV  GLTLNQAPRVACFCTVVRPSAHRARVHQ RATA  H SSRWNSNGF+GGA LGSAAS VRLRAVEEPAAA
Sbjct:    1 MVARGSLLSVVMGLTLNQAPRVACFCTVVRPSAHRARVHQARATAAPHSSSRWNSNGFQGGASLGSAASLVRLRAVEEPAAA 82
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69536.17959.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JFY5_9PHAE4.570e-3687.80Protein-ribulosamine 3-kinase n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69536contigEcto-sp13_S_contig69536:373..636 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69536.17959.1mRNA_Ecto-sp13_S_contig69536.17959.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69536 373..636 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69536.17959.1 ID=prot_Ecto-sp13_S_contig69536.17959.1|Name=mRNA_Ecto-sp13_S_contig69536.17959.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=88bp
MVARGTLLSVATGLTLNQAPRVACFCTVVRPSAHRARVHQGRATAVQHGS
SRWNSNGFRGGARLGSAASFVRLRAVEEPAAAAAAAAA
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