prot_Ecto-sp13_S_contig69388.17933.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig69388.17933.1
Unique Nameprot_Ecto-sp13_S_contig69388.17933.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length45
Homology
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: A0A067CGD4_SAPPC (Cnd1 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CGD4_SAPPC)

HSP 1 Score: 64.3 bits (155), Expect = 7.640e-11
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAVRSNALVVLGDLCVRW 45
            GK CL D+A AK S+ +F+REL T+   A+RSN L+VLGDLC+RW
Sbjct:  880 GKACLADEAFAKESITMFMRELQTSPIEAIRSNILLVLGDLCIRW 924          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: A0A7S1HFU5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HFU5_HEMAN)

HSP 1 Score: 62.8 bits (151), Expect = 2.000e-10
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAVRSNALVVLGDLCVRW 45
            GK+CL D  LAK+SVNLF+REL    +P +R+N LVVL DLCVR+
Sbjct:   47 GKICLSDATLAKKSVNLFLRELSCTPSPVLRNNVLVVLSDLCVRY 91          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: A0A7S2L2Y1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2L2Y1_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 9.690e-10
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAA---PAVRSNALVVLGDLCVRW 45
            GKLC+RD  LAK  VNLF REL +      P+V+SNAL+VLGDLCVR+
Sbjct:   33 GKLCIRDAKLAKNCVNLFARELYSEEGHCNPSVQSNALLVLGDLCVRY 80          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: D7FP86_ECTSI (Cnd1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP86_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 1.270e-9
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAV 30
            GKLCLRDKALAKRSVNLFVRELDTAAAPAV
Sbjct: 1067 GKLCLRDKALAKRSVNLFVRELDTAAAPAV 1096          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: A0A6H5JKF8_9PHAE (Cnd1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF8_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 1.270e-9
Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAV 30
            GKLCLRDKALAKRSVNLFVRELDTAAAPAV
Sbjct:  223 GKLCLRDKALAKRSVNLFVRELDTAAAPAV 252          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: H3GMN9_PHYRM (Cnd1 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMN9_PHYRM)

HSP 1 Score: 60.5 bits (145), Expect = 1.740e-9
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAVRSNALVVLGDLCVRW 45
            GKLCLRD+ LAK+ V +F+REL T     +RSN L++LGDLC+R+
Sbjct:  984 GKLCLRDQELAKKCVTMFIRELRTCDEQDIRSNILLILGDLCIRY 1028          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: A0A662Y756_9STRA (Cnd1 domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y756_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.740e-9
Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAVRSNALVVLGDLCVRW 45
            GKLCLRD+ LAK+ V +F+REL T     +RSN L++LGDLC+R+
Sbjct:  209 GKLCLRDQNLAKKCVTMFIRELRTCQEQDIRSNILLILGDLCIRY 253          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: M4BIG4_HYAAE (Cnd1 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BIG4_HYAAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.260e-9
Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAVRSNALVVLGDLCVRW 45
            GKLCLRD  LAK+ + +F+REL T     +RSN L++LGDLC+R+
Sbjct: 1018 GKLCLRDSGLAKKCMTMFIRELRTCEEQDIRSNILLILGDLCIRY 1062          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: A0A5D6XUH5_9STRA (Cnd1 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XUH5_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.450e-9
Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAVRSNALVVLGDLCVRW 45
            GKLCLRD+ LAK  + + +REL T A   +RSN L++LGDLC+R+
Sbjct: 1042 GKLCLRDQELAKSCITMLIRELRTCAVQDIRSNILLILGDLCIRY 1086          
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Match: A0A3M6VPA0_9STRA (Cnd1 domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPA0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 6.090e-9
Identity = 25/45 (55.56%), Postives = 34/45 (75.56%), Query Frame = 0
Query:    1 GKLCLRDKALAKRSVNLFVRELDTAAAPAVRSNALVVLGDLCVRW 45
            GKLCLRD  LAK+ + +F+REL T     +RSN L++LGDLC+R+
Sbjct: 1001 GKLCLRDSDLAKKCMTMFIRELRTCEEQDIRSNILLILGDLCIRY 1045          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig69388.17933.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067CGD4_SAPPC7.640e-1160.00Cnd1 domain-containing protein n=2 Tax=Saprolegnia... [more]
A0A7S1HFU5_HEMAN2.000e-1062.22Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A7S2L2Y1_9STRA9.690e-1062.50Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
D7FP86_ECTSI1.270e-9100.00Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JKF8_9PHAE1.270e-9100.00Cnd1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
H3GMN9_PHYRM1.740e-957.78Cnd1 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A662Y756_9STRA1.740e-957.78Cnd1 domain-containing protein (Fragment) n=2 Tax=... [more]
M4BIG4_HYAAE3.260e-955.56Cnd1 domain-containing protein n=1 Tax=Hyaloperono... [more]
A0A5D6XUH5_9STRA4.450e-955.56Cnd1 domain-containing protein n=1 Tax=Pythium bra... [more]
A0A3M6VPA0_9STRA6.090e-955.56Cnd1 domain-containing protein n=2 Tax=Peronospora... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026971Condensin subunit 1/Condensin-2 complex subunit D3PANTHERPTHR14222CONDENSINcoord: 1..44
NoneNo IPR availablePANTHERPTHR14222:SF1CONDENSIN-2 COMPLEX SUBUNIT D3coord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig69388contigEcto-sp13_S_contig69388:83..217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig69388.17933.1mRNA_Ecto-sp13_S_contig69388.17933.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig69388 83..217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig69388.17933.1 ID=prot_Ecto-sp13_S_contig69388.17933.1|Name=mRNA_Ecto-sp13_S_contig69388.17933.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=45bp
GKLCLRDKALAKRSVNLFVRELDTAAAPAVRSNALVVLGDLCVRW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026971CND1/NCAPD3