prot_Ecto-sp13_S_contig6920.17913.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6920.17913.1
Unique Nameprot_Ecto-sp13_S_contig6920.17913.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length211
Homology
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: D7FYV7_ECTSI (Anaphase-promoting complex subunit 10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYV7_ECTSI)

HSP 1 Score: 416 bits (1068), Expect = 7.610e-147
Identity = 209/210 (99.52%), Postives = 209/210 (99.52%), Query Frame = 0
Query:    1 MADDSQVSQQPAQPPEAKTEASELDYVTRREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210
            MADDSQVSQQPAQPPEAKTEASELDYVTRREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGA AIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR
Sbjct:    1 MADDSQVSQQPAQPPEAKTEASELDYVTRREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAAAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: W7U0V1_9STRA (Anaphase-promoting complex, subunit 10/DOC domain protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0V1_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.330e-69
Identity = 110/198 (55.56%), Postives = 141/198 (71.21%), Query Frame = 0
Query:   30 REIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPL---FAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPR--------------LASVQHDPSLLEFISPEFETFACIR 210
            R+IG EAVWSLS+AKPGNGV+Q+RDD  DTYWQSDG QPHLIN+QFHKKMT++E++ +LD+S DESYTPKK+SI+AG++FHDLVE+    L EP GWV+VP+   +A    G   +    AG   G VLRA F+QI ++AMHQNGRDTH+RQVKV+GPR              +AS+    ++ EF S E   F+ +R
Sbjct:   24 RDIGHEAVWSLSTAKPGNGVEQIRDDDMDTYWQSDGAQPHLINVQFHKKMTILEVSLYLDYSLDESYTPKKISIKAGTTFHDLVEIQTVNLKEPQGWVKVPVRNPYADRPSGVDTVGDATAGDPVGGVLRAFFLQISIIAMHQNGRDTHVRQVKVYGPRYSQASFCSHSRVEGIASLDTYGTMPEFTSAELAQFSTVR 221          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: F0XYN0_AURAN (Anaphase-promoting complex subunit 10 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYN0_AURAN)

HSP 1 Score: 217 bits (553), Expect = 1.120e-68
Identity = 116/205 (56.59%), Postives = 139/205 (67.80%), Query Frame = 0
Query:   16 EAKTEASELDYV-TRREIGREAVWSLSSAKPGNGVDQLR--------DDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLA-SVQHDPSLLEFISPEFETFACIR 210
            EA+T  SELD     REIG EAVWSLS+AKPGNGV+Q+R        D++T+TYWQSDGGQPHLINIQFHKKM++ E+AF+LD+  DESYTPKK+SIRAG++FHDLVEV V +LHEP GWV V L                   +G  LRA F+Q+CVV+MHQNGRDTH+RQ K+FGPR    V        F S     FA +R
Sbjct:    6 EARTGTSELDVSPANREIGDEAVWSLSTAKPGNGVEQIRAAPGGKRRDENTETYWQSDGGQPHLINIQFHKKMSISEMAFYLDYGLDESYTPKKMSIRAGTTFHDLVEVEVVDLHEPTGWVTVALSH----------------GDGKALRAFFLQVCVVSMHQNGRDTHVRQAKIFGPRTPIDVCAGKHAARFTSVALTQFAVLR 194          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: A0A7S3AMX8_9EUKA (Anaphase-promoting complex subunit 10 n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AMX8_9EUKA)

HSP 1 Score: 212 bits (539), Expect = 3.680e-66
Identity = 110/183 (60.11%), Postives = 135/183 (73.77%), Query Frame = 0
Query:   29 RREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRV-PLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210
            RREIG +AVWSLS+AKPGNGV+QLRDDSTDTYWQSDG QPHLINIQF KKM V EI  + DF  DESYTP K+SIRAG++FHDL E+ V+EL+EP GWV + P   P         +D A G++  +LR HF+Q+ ++A HQNGRDTHIRQ+K++ PR    QH   L EF S  F+ +AC+R
Sbjct:   51 RREIGEQAVWSLSTAKPGNGVEQLRDDSTDTYWQSDGPQPHLINIQFPKKMRVHEIQIYTDFKHDESYTPSKISIRAGTTFHDLQEIHVEELNEPSGWVTILPPREP--------TSDTAPGSQ--LLRTHFIQVAILANHQNGRDTHIRQIKIYTPRKDMGQH-MGLPEFNSIAFQQYACLR 222          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: A0A485KIW7_9STRA (Anaphase-promoting complex subunit 10 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KIW7_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.870e-65
Identity = 109/182 (59.89%), Postives = 129/182 (70.88%), Query Frame = 0
Query:   29 RREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210
            +REIG EAVW+LSSAKPGNGV QLRDD+ DTYWQSDG QPHLINIQFHKKMT+ E+A +LD+  DESYTPK L IRAG++FHDLV++    + EP GWV +PL      GA A         E P LR  F+QI V  MHQNGRDTHIRQVKVF PR  ++    +  E  + +F +FACIR
Sbjct:    3 KREIGDEAVWTLSSAKPGNGVHQLRDDNMDTYWQSDGPQPHLINIQFHKKMTIREVALYLDYKLDESYTPKMLMIRAGTTFHDLVDIKAHTIAEPNGWVTIPLTQTVVSGAAAF--------EKP-LRTFFLQISVTGMHQNGRDTHIRQVKVFAPRQTALLGLDAAPEPSTVDFSSFACIR 175          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: A0A7S0RL68_9CHLO (Anaphase-promoting complex subunit 10 n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RL68_9CHLO)

HSP 1 Score: 208 bits (530), Expect = 2.060e-65
Identity = 101/188 (53.72%), Postives = 132/188 (70.21%), Query Frame = 0
Query:   23 ELDYVTRREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210
            E  + +R EIG+ AVWS++SAKPGNGV+ LRDD+ +TYWQSDGGQPHLINIQF KK+ + E+  + DF  DESYTP KLSIRAG+SFHDL E+ V +L EPVGW+  PL   G              +    +RA+FVQ+ V++ HQNGRDTHIRQVK++GP +   +     L++ SPEF+ F+C+R
Sbjct:    5 EFKHDSRAEIGKLAVWSVTSAKPGNGVEMLRDDNLETYWQSDGGQPHLINIQFQKKVRLKELEIYADFKQDESYTPNKLSIRAGNSFHDLREIRVVDLEEPVGWMSFPLTPDG--------------SNQEYMRAYFVQLAVLSNHQNGRDTHIRQVKIYGPHVDLARAMGHPLQYTSPEFQMFSCVR 178          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: A0A8K1FCQ9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FCQ9_PYTOL)

HSP 1 Score: 206 bits (525), Expect = 9.720e-65
Identity = 106/182 (58.24%), Postives = 129/182 (70.88%), Query Frame = 0
Query:   29 RREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210
            RREIG +AVWSLSSAKPGNGVDQLRD++ DTYWQSDG QPHLINIQF KKMT+ EIA +LD   DESYTP+K+SIRAGS+ HDL E+  +++ EP GWV + L  P                E P LR  F+Q+ V+AMHQNGRDTHIRQVK++ PR  +   D S+ E  S +F  ++CIR
Sbjct:    5 RREIGDDAVWSLSSAKPGNGVDQLRDNNVDTYWQSDGSQPHLINIQFFKKMTISEIALYLDHKLDESYTPRKISIRAGSTVHDLKEILAQDIEEPNGWVSIQLAGPDD-------------PETP-LRTFFLQVAVLAMHQNGRDTHIRQVKIYAPREKTNTLDRSIPEPSSEQFWAYSCIR 172          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: H3GWS0_PHYRM (Anaphase-promoting complex subunit 10 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GWS0_PHYRM)

HSP 1 Score: 205 bits (522), Expect = 3.490e-64
Identity = 101/182 (55.49%), Postives = 134/182 (73.63%), Query Frame = 0
Query:   29 RREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210
            RRE+G +AVWSLSSAKPGNGVDQLRD++ DTYWQSDG QPHLINIQF +KM + E+A +LD+  DESYTPKK++IR+GS+ HDL E+ V+++ EP GW+ +PL+                G+E   LR  F+QI ++AMHQNGRDTHIRQVK++ PR A+V  D ++ +  +P F  ++CIR
Sbjct:   12 RREVGDDAVWSLSSAKPGNGVDQLRDNNMDTYWQSDGMQPHLINIQFSRKMAIKEVALYLDYKLDESYTPKKIAIRSGSTAHDLKEIHVQQIVEPNGWISIPLYT-------------GDGSEQTPLRTFFLQIVLLAMHQNGRDTHIRQVKIYAPREANVL-DWTIPDATTPLFAAYSCIR 179          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: A0A6A4EML9_9STRA (Anaphase-promoting complex subunit 10 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EML9_9STRA)

HSP 1 Score: 205 bits (521), Expect = 4.480e-64
Identity = 102/182 (56.04%), Postives = 131/182 (71.98%), Query Frame = 0
Query:   29 RREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210
            RRE+G +AVWSLSSAKPGNGVDQLRD+S DTYWQSDG QPHL+NIQF +KM V E+A +LD+  DESYTPKK++IR+GS+ HDL E+ V+ + EP GW+ +PL +                 E   LR  F+QI ++AMHQNGRDTHIRQVKV+ PR  +V  D ++ E  +P+F  ++CIR
Sbjct:   11 RREVGDDAVWSLSSAKPGNGVDQLRDNSVDTYWQSDGVQPHLVNIQFSRKMAVKEVALYLDYKLDESYTPKKVAIRSGSTVHDLKEIHVQHIAEPSGWISIPLSSD---------------EEQVPLRTFFLQIVILAMHQNGRDTHIRQVKVYAPRETNVL-DWTIPEATTPQFAAYSCIR 176          
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Match: K3WX17_GLOUD (Anaphase-promoting complex subunit 10 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WX17_GLOUD)

HSP 1 Score: 204 bits (519), Expect = 8.450e-64
Identity = 103/182 (56.59%), Postives = 129/182 (70.88%), Query Frame = 0
Query:   29 RREIGREAVWSLSSAKPGNGVDQLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKKLSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGAEGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFISPEFETFACIR 210
            RRE+G +AVWSLS+AKPGNGVDQLRD++ DTYWQSDG QPHLIN+QFHKKM + EIA +LD+  DESYTPKK+SIR GS+ HDL E+  + L EP GWV +PL              A+   +   L+  F+QI ++AMHQNGRDTHIRQVK++ PR  +   D SL E  + +F  F+CIR
Sbjct:    7 RREVGDDAVWSLSTAKPGNGVDQLRDNNVDTYWQSDGSQPHLINVQFHKKMALKEIALYLDYKLDESYTPKKISIRCGSTVHDLKEIYAQSLAEPNGWVTIPL-------------TASDDDDETPLQTFFLQIAIIAMHQNGRDTHIRQVKIYAPREPNAL-DRSLPEPSTEQFWAFSCIR 174          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6920.17913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYV7_ECTSI7.610e-14799.52Anaphase-promoting complex subunit 10 n=2 Tax=Ecto... [more]
W7U0V1_9STRA2.330e-6955.56Anaphase-promoting complex, subunit 10/DOC domain ... [more]
F0XYN0_AURAN1.120e-6856.59Anaphase-promoting complex subunit 10 n=1 Tax=Aure... [more]
A0A7S3AMX8_9EUKA3.680e-6660.11Anaphase-promoting complex subunit 10 n=1 Tax=Hapt... [more]
A0A485KIW7_9STRA1.870e-6559.89Anaphase-promoting complex subunit 10 n=1 Tax=Apha... [more]
A0A7S0RL68_9CHLO2.060e-6553.72Anaphase-promoting complex subunit 10 n=1 Tax=Pyra... [more]
A0A8K1FCQ9_PYTOL9.720e-6558.24Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GWS0_PHYRM3.490e-6455.49Anaphase-promoting complex subunit 10 n=1 Tax=Phyt... [more]
A0A6A4EML9_9STRA4.480e-6456.04Anaphase-promoting complex subunit 10 n=3 Tax=Phyt... [more]
K3WX17_GLOUD8.450e-6456.59Anaphase-promoting complex subunit 10 n=1 Tax=Glob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004939APC10/DOC domainSMARTSM01337APC10_2coord: 29..209
e-value: 3.1E-86
score: 302.5
IPR004939APC10/DOC domainPFAMPF03256ANAPC10coord: 15..205
e-value: 2.6E-63
score: 213.0
IPR004939APC10/DOC domainPROSITEPS51284DOCcoord: 8..208
score: 30.808
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 2..185
e-value: 5.5E-64
score: 217.6
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 28..184
IPR016901Anaphase-promoting complex subunit APC10/Doc1PIRSFPIRSF028841APC10coord: 4..210
e-value: 9.7E-70
score: 231.7
IPR016901Anaphase-promoting complex subunit APC10/Doc1PANTHERPTHR12936ANAPHASE-PROMOTING COMPLEX 10coord: 20..210
NoneNo IPR availablePANTHERPTHR12936:SF0ANAPHASE-PROMOTING COMPLEX SUBUNIT 10coord: 20..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6920contigEcto-sp13_S_contig6920:5828..7739 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6920.17913.1mRNA_Ecto-sp13_S_contig6920.17913.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6920 5828..7880 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6920.17913.1 ID=prot_Ecto-sp13_S_contig6920.17913.1|Name=mRNA_Ecto-sp13_S_contig6920.17913.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=211bp
MADDSQVSQQPAQPPEAKTEASELDYVTRREIGREAVWSLSSAKPGNGVD
QLRDDSTDTYWQSDGGQPHLINIQFHKKMTVVEIAFHLDFSSDESYTPKK
LSIRAGSSFHDLVEVTVKELHEPVGWVRVPLFAPGGGGAVAIAADAAGGA
EGPVLRAHFVQICVVAMHQNGRDTHIRQVKVFGPRLASVQHDPSLLEFIS
PEFETFACIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004939APC_su10/DOC_dom
IPR008979Galactose-bd-like_sf
IPR016901APC10/Doc1