mRNA_Ecto-sp13_S_contig6884.17857.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: D8LIS5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS5_ECTSI) HSP 1 Score: 495 bits (1275), Expect = 3.150e-169 Identity = 297/356 (83.43%), Postives = 307/356 (86.24%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVFGSTSTSTDPLTATTATGSTEGXXXXXXXXXXXXXXXXXXXXXXVDNESTTVTPSKERRVVMWNEAWVKAGERAEDECPICMCPMQPIPPS--GDRDDGPGTDDAGSLLPSKRDAADSGDIARLAAVAESPLETGPPEAESKFQRGVGEADVEDPAPLPTGEGDWPDERRAGGPQHVAEQKRGVTPAGSGGAPMSKVGKGGKLGEHRPSRAVRKQRQRLLLSCSHVFHKACLKAFEGF 1062
CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCAR LQCAYRRHRA+RQY+GLLRRHYGAGLGDT RRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLA SRQVFG STSTDPLTATTAT XXXXXXXXXXXXXXXXXXXXX VTPSKERRVV+W EAWVKAGERAEDECPICMCPMQPIPPS GD +DG GTD AGSLLPS+RDAA S DIAR AAV ESPL+T PPEA SK QRGVGEADVE+ APLPTGEG+WPD RRAGGPQHVAE+K GVTPAGS APMSKVG EHRP RAVRKQR+RLLLSCSHVFHKA GF
Sbjct: 246 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARRLQCAYRRHRARRQYRGLLRRHYGAGLGDTLRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLAFSRQVFGPASTSTDPLTATTAT------XXXXXXXXXXXXXXXXXXXXXXXXXXXXVTPSKERRVVVWKEAWVKAGERAEDECPICMCPMQPIPPSTSGDCNDGTGTDAAGSLLPSERDAAASEDIARAAAVTESPLKTDPPEAASKSQRGVGEADVEEAAPLPTGEGNWPDVRRAGGPQHVAEEKHGVTPAGSVAAPMSKVG------EHRPPRAVRKQRERLLLSCSHVFHKAVSTEASGF 589
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A8K1C7G8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7G8_PYTOL) HSP 1 Score: 110 bits (275), Expect = 2.000e-23 Identity = 74/200 (37.00%), Postives = 100/200 (50.00%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVFGSTSTSTDPLTATTATGSTEGXXXXXXXXXXXXXXXXXXXXXXVDNESTTVTPSKERRVVMWNEAWVKAGERAEDECPICM 600
C+ SFE+FLR ++R CPLCRK +YQK+AT +GAV R +CA +Q +R R +R+ L + Y G GD RRR FL+ + +T +L A+ R D+ID L EFD++L+LSRQVF + TD D+ S RR V W + KA R E ECPIC+
Sbjct: 152 CIQSFERFLRTKQRVCPLCRKDNYQKRATVKGAVIHRDKCALRIQTMFRGFRERRRLDSLWHQFYRQGKGDPVRRRRFLANRIGKTTDRLVGAMRARDDSIDALLAEFDKTLSLSRQVFDPSQPQTD------------------------------------DDPSFPT-----RRGVDWLAVFEKARLRDERECPICI 310
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A6G0WX15_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WX15_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.730e-21 Identity = 71/200 (35.50%), Postives = 102/200 (51.00%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVFGSTSTSTDPLTATTATGSTEGXXXXXXXXXXXXXXXXXXXXXXVDNESTTVTPSKERRVVMWNEAWVKAGERAEDECPICM 600
CL+SFE+FLR +R CPLCRK +YQK+ T+QG +R +CA +Q RR A+++Y LL Y +G G RR+ F + + + + ++ A++ R D+ID L EFD+S++LSRQV S +TT S +G +T K W+EA KA R E ECPIC+
Sbjct: 165 CLASFERFLRTNQRVCPLCRKQNYQKRLTKQGERIYRMQCAVKVQACVRRFLARKRYPQLLNEFYKSGRGSPSRRKTFYATKLSSISSRIVRAIDAREDSIDALLAEFDKSMSLSRQVLNGES-------STTTASSCDGL----------------------------MTVDK------WHEALRKAVLRDEKECPICI 323
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: W4GXZ0_9STRA (RING-type domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GXZ0_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.280e-20 Identity = 67/200 (33.50%), Postives = 99/200 (49.50%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVFGSTSTSTDPLTATTATGSTEGXXXXXXXXXXXXXXXXXXXXXXVDNESTTVTPSKERRVVMWNEAWVKAGERAEDECPICM 600
CL+SFE+FLR +R CPLCRK +YQK+ T QG +R +CA +Q R + A+R++ LLR+++ +G G +RR+EF + + + + ++ A+E R D+ID L FD+SL LSR VF + D++ V S + WN KA R E ECPIC+
Sbjct: 180 CLASFERFLRTNQRVCPLCRKQNYQKRHTNQGERGYRIQCAVKIQTFVRGYFARRRFPALLRQYFKSGNGSPRRRQEFYASKISNISDRIVDAIEAREDSIDALLATFDKSLTLSRHVFNN---------------------------------------EQCDDDGGHVMTSDK-----WNAMLEKAALRDEKECPICI 335
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A6A3MY24_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3MY24_9STRA) HSP 1 Score: 101 bits (251), Expect = 6.010e-20 Identity = 57/132 (43.18%), Postives = 81/132 (61.36%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVF--GSTSTSTDPLT 390
C++SFE+FLR +R CPLCRK +YQK+ T + R A+ +Q R A+RQ GL ++ Y +G GD RRR F + + +T +L A+ R D+ID L EFD+SL++SR+VF + T TDP T
Sbjct: 191 CITSFERFLRTNQRVCPLCRKQNYQKRNTTMASAFHRDYSAKRIQAVLRGFLARRQAAGLWQKFYSSGKGDPIRRRRFFANRVGKTTDRLVTAMSKRDDSIDALLAEFDKSLSMSRRVFQDNAPETETDPAT 322
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: T0QW99_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QW99_SAPDV) HSP 1 Score: 100 bits (249), Expect = 7.790e-20 Identity = 53/119 (44.54%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVF 357
CL+SFE+FLR +R CPLCRK +Y+KKAT+ G +R CAR LQ R A+R+Y LL +Y G GD +RR F + + + + ++ A++ R D+ID L EFD S++ SR +F
Sbjct: 170 CLTSFERFLRTTDRVCPLCRKQNYEKKATQSGEAHFRSICARRLQARIRGWLARRRYTSLLAHYYKQGYGDPRRRSLFYASKVSAISSRIVRAMKARADSIDALLAEFDESMSRSRAIF 288
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A024U460_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U460_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.030e-19 Identity = 53/119 (44.54%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVF 357
CL+SFE+FLR +R CPLCRK +YQK+ T+QG ++R +C +Q R A+R++ LLR+++ AGLG RR+ F + + + + ++ A+E R D+ID L FD+SL LSR VF
Sbjct: 189 CLASFERFLRTNQRVCPLCRKQNYQKRHTKQGEQSFRIQCTIKIQSFVRGFIARRRFPSLLRQYFKAGLGSPTRRQAFYASKISNLSDRIVCAIEAREDSIDALLASFDKSLTLSRHVF 307
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A485LVC3_9STRA (Aste57867_25342 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LVC3_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.170e-18 Identity = 51/120 (42.50%), Postives = 77/120 (64.17%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVFG 360
CL+SFE+FLR +R CPLCRK +YQK+ T QG +R +C +Q R A++++ LL ++Y G G RR+ F + + + ++ +A++ R D+ID L EFD+S+ LSRQVFG
Sbjct: 218 CLASFERFLRTSQRVCPLCRKQNYQKRMTTQGERLYRVQCVLKIQTRLRGFLARKRFPVLLGQYYKRGFGSPSRRKAFYATKLGTISDRIVSAIDAREDSIDSLLAEFDKSMLLSRQVFG 337
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A7S1CAV5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CAV5_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.070e-18 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVF 357
CL SFE+F RA+ER+CP+CR +Y+K+ TR GA CA +LQ +R HR + + R +Y AG GD RRR F + + +E + +L AL D D +D LF + D + SR+ F
Sbjct: 88 CLESFERFSRARERTCPMCRAANYEKRPTRVGAKRHVHACATVLQARWRGHRTRVAFAEQRRAYYAAGKGDPARRRRFFAERMSEVSTRLEDALADEDDALDALFAQLDADVEASREAF 206
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: G4Z210_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z210_PHYSP) HSP 1 Score: 86.7 bits (213), Expect = 1.150e-15 Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 1 CLSSFEKFLRAQERSCPLCRKVDYQKKATRQGAVAWRQRCARLLQCAYRRHRAQRQYQGLLRRHYGAGLGDTQRRREFLSGQAAETAGKLAAALEDRGDTIDRLFGEFDRSLALSRQVF 357
C+ SFE+FLR +R CPLCRK DYQK+AT + R+ A+ +Q Y +G GD RRR F + + +T +L A+ R D+ID L EFD+SL++SR+VF
Sbjct: 59 CIMSFERFLRTNQRVCPLCRKQDYQKRATTMASAFHREYSAKRVQF------------------YSSGKGDPVRRRRFFANRVGKTTDRLVTAMSKRDDSIDALLAEFDKSLSMSRRVF 159 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6884.17857.1 >prot_Ecto-sp13_S_contig6884.17857.1 ID=prot_Ecto-sp13_S_contig6884.17857.1|Name=mRNA_Ecto-sp13_S_contig6884.17857.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp MWNEAWVKAGERAEDECPICMCPMQPIPPSGDRDDGPGTDDAGSLLPSKRback to top mRNA from alignment at Ecto-sp13_S_contig6884:3617..7304- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6884.17857.1 ID=mRNA_Ecto-sp13_S_contig6884.17857.1|Name=mRNA_Ecto-sp13_S_contig6884.17857.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3688bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6884:3617..7304- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6884:3617..7304- >mRNA_Ecto-sp13_S_contig6884.17857.1 ID=mRNA_Ecto-sp13_S_contig6884.17857.1|Name=mRNA_Ecto-sp13_S_contig6884.17857.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=609bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6884:3617..7304- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |