prot_Ecto-sp13_S_contig6884.17857.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6884.17857.1
Unique Nameprot_Ecto-sp13_S_contig6884.17857.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length203
Homology
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: D8LIS5_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIS5_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 2.490e-78
Identity = 138/177 (77.97%), Postives = 146/177 (82.49%), Query Frame = 0
Query:    1 MWNEAWVKAGERAEDECPICMCPMQPIPPS--GDRDDGPGTDDAGSLLPSKRDAADSGDIARLAAVAESPLETGPPEAESKFQRGVGEADVEDPAPLPTGEGDWPDERRAGGPQHVAEQKRGVTPAGSGGAPMSKVGKGGKLGEHRPSRAVRKQRQRLLLSCSHVFHKACLKAFEGF 175
            +W EAWVKAGERAEDECPICMCPMQPIPPS  GD +DG GTD AGSLLPS+RDAA S DIAR AAV ESPL+T PPEA SK QRGVGEADVE+ APLPTGEG+WPD RRAGGPQHVAE+K GVTPAGS  APMSKVG      EHRP RAVRKQR+RLLLSCSHVFHKA      GF
Sbjct:  419 VWKEAWVKAGERAEDECPICMCPMQPIPPSTSGDCNDGTGTDAAGSLLPSERDAAASEDIARAAAVTESPLKTDPPEAASKSQRGVGEADVEEAAPLPTGEGNWPDVRRAGGPQHVAEEKHGVTPAGSVAAPMSKVG------EHRPPRAVRKQRERLLLSCSHVFHKAVSTEASGF 589          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A024U460_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U460_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.700e-10
Identity = 32/44 (72.73%), Postives = 34/44 (77.27%), Query Frame = 0
Query:  157 LLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYESVEPSRPDL 200
            LLSCSHV H  CL AFE FNIYEVHLCPVCR +YES  P  PD+
Sbjct:  358 LLSCSHVLHADCLHAFETFNIYEVHLCPVCRAKYES-RPVHPDM 400          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A6A5ALR7_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ALR7_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.010e-9
Identity = 29/36 (80.56%), Postives = 29/36 (80.56%), Query Frame = 0
Query:  157 LLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYES 192
            LLSCSHV H  CL AFE FNIYEVHLCPVCR  YES
Sbjct:  334 LLSCSHVLHADCLHAFEAFNIYEVHLCPVCRSNYES 369          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A485LVC3_9STRA (Aste57867_25342 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LVC3_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.130e-9
Identity = 29/36 (80.56%), Postives = 29/36 (80.56%), Query Frame = 0
Query:  157 LLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYES 192
            LLSCSHV H  CL AFE FNIYEVHLCPVCR  YES
Sbjct:  389 LLSCSHVLHADCLDAFESFNIYEVHLCPVCRSHYES 424          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A1V9Y8L0_9STRA (RING finger protein 32-like n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y8L0_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.190e-9
Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
Query:  156 LLLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYE 191
            +LL+CSHVFH  CL AFE FNIYEVHLCPVCR  YE
Sbjct:  289 MLLNCSHVFHTDCLNAFESFNIYEVHLCPVCRCNYE 324          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A812M4M8_9DINO (RNF32 protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812M4M8_9DINO)

HSP 1 Score: 67.0 bits (162), Expect = 1.530e-9
Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 0
Query:  157 LLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYE 191
            LLSCSHVFH+ CL +FE F+++EVHLCPVCRQ YE
Sbjct:  348 LLSCSHVFHRCCLMSFESFHVFEVHLCPVCRQSYE 382          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A1Q9D2K7_SYMMI (RING finger protein 32 n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9D2K7_SYMMI)

HSP 1 Score: 67.0 bits (162), Expect = 1.730e-9
Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 0
Query:  157 LLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYE 191
            LLSCSHVFH+ CL +FE F+++EVHLCPVCRQ YE
Sbjct:  533 LLSCSHVFHRCCLMSFESFHVFEVHLCPVCRQSYE 567          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: T0QW99_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QW99_SAPDV)

HSP 1 Score: 66.6 bits (161), Expect = 1.860e-9
Identity = 29/36 (80.56%), Postives = 29/36 (80.56%), Query Frame = 0
Query:  157 LLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYES 192
            LLSCSHV H  CL AFE FNIYEVHLCPVCR  YES
Sbjct:  331 LLSCSHVLHAECLVAFESFNIYEVHLCPVCRGHYES 366          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A812K7W9_9DINO (RNF32 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812K7W9_9DINO)

HSP 1 Score: 67.0 bits (162), Expect = 1.860e-9
Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 0
Query:  157 LLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYE 191
            LLSCSHVFH+ CL +FE F+++EVHLCPVCRQ YE
Sbjct:  782 LLSCSHVFHRCCLMSFESFHVFEVHLCPVCRQSYE 816          
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Match: A0A812MML2_9DINO (RNF32 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812MML2_9DINO)

HSP 1 Score: 67.0 bits (162), Expect = 1.900e-9
Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = 0
Query:  157 LLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYE 191
            LLSCSHVFH+ CL +FE F+++EVHLCPVCRQ YE
Sbjct:  904 LLSCSHVFHRCCLMSFESFHVFEVHLCPVCRQSYE 938          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6884.17857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIS5_ECTSI2.490e-7877.97RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A024U460_9STRA1.700e-1072.73Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6A5ALR7_9STRA1.010e-980.56RING-type domain-containing protein n=1 Tax=Aphano... [more]
A0A485LVC3_9STRA1.130e-980.56Aste57867_25342 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9Y8L0_9STRA1.190e-977.78RING finger protein 32-like n=1 Tax=Thraustotheca ... [more]
A0A812M4M8_9DINO1.530e-974.29RNF32 protein n=1 Tax=Symbiodinium natans TaxID=87... [more]
A0A1Q9D2K7_SYMMI1.730e-974.29RING finger protein 32 n=1 Tax=Symbiodinium microa... [more]
T0QW99_SAPDV1.860e-980.56Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
A0A812K7W9_9DINO1.860e-974.29RNF32 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A812MML2_9DINO1.900e-974.29RNF32 protein n=1 Tax=Symbiodinium sp. CCMP2592 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 156..195
e-value: 1.6E-8
score: 35.9
NoneNo IPR availablePANTHERPTHR14991FAMILY NOT NAMEDcoord: 2..192
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 155..195
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 157..187
score: 8.624

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6884contigEcto-sp13_S_contig6884:3669..5013 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6884.17857.1mRNA_Ecto-sp13_S_contig6884.17857.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6884 3617..7304 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6884.17857.1 ID=prot_Ecto-sp13_S_contig6884.17857.1|Name=mRNA_Ecto-sp13_S_contig6884.17857.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=203bp
MWNEAWVKAGERAEDECPICMCPMQPIPPSGDRDDGPGTDDAGSLLPSKR
DAADSGDIARLAAVAESPLETGPPEAESKFQRGVGEADVEDPAPLPTGEG
DWPDERRAGGPQHVAEQKRGVTPAGSGGAPMSKVGKGGKLGEHRPSRAVR
KQRQRLLLSCSHVFHKACLKAFEGFNIYEVHLCPVCRQEYESVEPSRPDL
LQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING