prot_Ecto-sp13_S_contig688.17852.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp13_S_contig688.17852.1
Unique Name	prot_Ecto-sp13_S_contig688.17852.1
Type	polypeptide
Organism	Ectocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length	2421

Homology

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BLAST of mRNA_Ecto-sp13_S_contig688.17852.1 vs. uniprot
Match: D8LMJ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ2_ECTSI)

HSP 1 Score: 1834 bits (4751), Expect = 0.000e+0
Identity = 1022/1263 (80.92%), Postives = 1048/1263 (82.98%), Query Frame = 0

Query:    1 RCASDLTDYIASDPSVSNFLGTLFGLLARGGAKNMHQRVMGTFANLAYLCVAGGASTEWAGHLRESLKQFLLHFTETADVLGNFNLDPLEAQDRQLKFQGVRFEIARFLWCMIRLDLCHGSSVDRLAAYISELDVLGASAGVLYENVPRTCLKHHEVCIATPSERYASDGSGGEGGNGYDTAVANEHSGHSSGGQERAVDASEQMRADTVRTFALWILAHYTGRSDDRVHVASHGGLTVLTSILMGPTGLVEAAKAGGASGDKPASKQSFINLKLAAKALANLCQAPQNAELVERAGALAAIKALYAYISDNNDIVGNASASTQPSTSSAYGRAQMNCVPARYKIDPDFRKAYLVIQENLWRPVVKDPVVHDDGSVTVHYEVPAGNNECFELSKRLTPLMVERKELQICQGEVPHQINVFAEVAACLSALAMHSSVLKLFAPSGVLGPFLELSLEQLVPRETCLTALLDTPVKAYSQHAQVMRHLWSLIASTVLDSETDAPESEGDDTEGNFGEDAVVQEGDSTDVSGEGAGDSTVEPKAERRRQSDAETASWSSRIVQKKLEQALAVRVLDRLVAGADEDAFEPTESSSTRGDDSWGSDKIGEQDSQQPGGGKGLSIDGGAKSKRRRSSAASAPLSMLDVGRRTSAEFRRQSLLMTSGRAYTVSGILSQQVLLSGIIVLASPTDESKDNWRRVLPSSLAAPVLSAQRRLEYFCIGLAGSVSDAVRRNWLALDGKRTNARNAMKALMELCVDHMAVLVNKAELASFQNRTDSQTAATPEPPELSSLATQRHSNNSAEEKWPRARHQRESLTDPPEKPDSKSAPKRGLRLSINPDVGKCRRDENGGGVGGGGFDGNMGAAGVSGDDRRHGRDQSALFRQESSFDSAGAISALSGMSGLGVGGGAETRGGIEAFLLPEEEQVVQMLFRAILSLLSVEEECTTAGDPRFGDGSENPRRQQSRTVGKNRWGSFRGREGQSRFGVEAAGDSADGAEGRGDDTTRPSAGAAGRLDDILRLCCRLLRCGPGDGVLHVSLLAIGKILSISSRRKVNASELEGVVPAVASFLERPSLWVKHACLTLLHRMASRNDLGGVVGLARGSKSRQVIACLSNADTGTRLAAANLVGVLAKDAFYSKSIVFPEAGTPNISAVGGEAEPALTLETLIVMSIDLHVDSHPQASLDMDGDFDVHQRSEHGCIPPLLAMVRSGVCNTERGAASMEQEVALCVLQDLASANNLCREAIVSHGGVPVLLQAPENYSARARRAVA 1263
            RCASDLTDYIASDPSVSNFLGTLFGLLARG AKNMHQRVMGTFANLAYLCVAGGASTEWAGHLRESLKQFLLHFTET+DVLGNFNLDPLEAQDRQLKFQGVRFE+                 VD L                               CIATPSERYASDGSGGEGG+GYDTAVA+EHSG S GGQERAVDASEQMRADTVRTFALWILAHYTGRSDDRVHVASHGGLTVLTSILMGPTGLVEAAKAGGASG KPASKQSFINLKLAAKALANLCQAPQNAELVE AGALAAIKALYAYISDNNDIVGN SASTQPSTSSAYGRAQMNC+PARYKIDPDFRKAYLVIQENLWRPVVKDPVVH+DGS+TVHYEVPAGNNECFELSK+LTPLMVERKELQICQGEVPHQINVFAEVAACLSALAMHSSVLKLFAPSGVLGPFLELSLEQLVPRETCLTALLDTPVKAYSQHAQVMRHLWSLI STVLDSETDAPESEGDDTEGNFGEDAVVQEGD  DVSGEGAGD TVEPKAERRRQSDAETASWSSRIVQKKLEQALAVRVLDRLVAGADEDAFEP +SSSTRGD SWGSDKIGEQDSQQPGGGKGLS D GAKSKRRRSS ASAPLS+LDVGRRTSAEFRRQSLLMTSGRAYTVSGILSQQVLLSGIIVLASPTDESKD WRRVL +SLAAPVLSAQRRLEYFCIGLAGSVSDAVRRNWLALDG RTNARNAMKALMELCVDHMAVLVNKAELASFQNR D++T AT EP  LS LATQR+SNNSAEEK PRAR QRESLTDPPEKPD+KS+PKRGL LSINPDVGKCR DE GGG GG GFDG M AAGV GDDRRHGR+Q ALFRQE SFDSAGAISALSGMSGLGVGGGAETRGGIEAFLLPEEEQVVQMLFRAILSLLSV+EECTTA D R GDGSENPRRQQSRTVGKNRWGSFRGRE QSR GVEAAGDSA GAEGRGDDT+RP AGAAGRLDDILRLCCRLLRCGPGDGVLHVSL AIGK+ +             G  P+ A                        N   G  G  R S +RQ                                           S+   ++E                      ASLDMDGDFDV QRSE GCIPPLLAMVRSG CNTERGAASMEQEVALCVLQDLASANNLCREAIV HGGVPVLLQAPENYSARARRAVA
Sbjct:  422 RCASDLTDYIASDPSVSNFLGTLFGLLARGSAKNMHQRVMGTFANLAYLCVAGGASTEWAGHLRESLKQFLLHFTETSDVLGNFNLDPLEAQDRQLKFQGVRFEV-----------------VDLLQ------------------------------CIATPSERYASDGSGGEGGHGYDTAVASEHSGRSFGGQERAVDASEQMRADTVRTFALWILAHYTGRSDDRVHVASHGGLTVLTSILMGPTGLVEAAKAGGASGGKPASKQSFINLKLAAKALANLCQAPQNAELVEPAGALAAIKALYAYISDNNDIVGNTSASTQPSTSSAYGRAQMNCIPARYKIDPDFRKAYLVIQENLWRPVVKDPVVHEDGSLTVHYEVPAGNNECFELSKKLTPLMVERKELQICQGEVPHQINVFAEVAACLSALAMHSSVLKLFAPSGVLGPFLELSLEQLVPRETCLTALLDTPVKAYSQHAQVMRHLWSLITSTVLDSETDAPESEGDDTEGNFGEDAVVQEGDGIDVSGEGAGDPTVEPKAERRRQSDAETASWSSRIVQKKLEQALAVRVLDRLVAGADEDAFEPAQSSSTRGDGSWGSDKIGEQDSQQPGGGKGLSFDEGAKSKRRRSSGASAPLSVLDVGRRTSAEFRRQSLLMTSGRAYTVSGILSQQVLLSGIIVLASPTDESKDKWRRVLSASLAAPVLSAQRRLEYFCIGLAGSVSDAVRRNWLALDGNRTNARNAMKALMELCVDHMAVLVNKAELASFQNRPDTETVATTEPSALSPLATQRNSNNSAEEKSPRARPQRESLTDPPEKPDTKSSPKRGLGLSINPDVGKCRGDEIGGGGGGCGFDGGMTAAGVGGDDRRHGREQPALFRQERSFDSAGAISALSGMSGLGVGGGAETRGGIEAFLLPEEEQVVQMLFRAILSLLSVKEECTTAEDSRLGDGSENPRRQQSRTVGKNRWGSFRGRERQSRLGVEAAGDSAGGAEGRGDDTSRPPAGAAGRLDDILRLCCRLLRCGPGDGVLHVSLQAIGKVSAAGG----------GGAPSAA------------------------NTPDGKPGTRR-SFTRQ-------------------------------------------SSSEWDSE----------------------ASLDMDGDFDVRQRSEDGCIPPLLAMVRSGGCNTERGAASMEQEVALCVLQDLASANNLCREAIVCHGGVPVLLQAPENYSARARRAVA 1537

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BLAST of mRNA_Ecto-sp13_S_contig688.17852.1 vs. uniprot
Match: D8LMJ3_ECTSI (Ankyrin repeat domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ3_ECTSI)

HSP 1 Score: 508 bits (1308), Expect = 8.440e-144
Identity = 267/292 (91.44%), Postives = 272/292 (93.15%), Query Frame = 0

Query: 2130 MSRQGYDGQPGQGRVSPVPGLTTAHQNASASREPSRTRSLNRRRVRYGSQLNGSLQVGVPGTHAYANRVRTGGSASSGLGMEEGTLQGNKDEHGLKFLGSLSDVFGDETVEVYLGSFHQQALISEAKKVLSQPRNRGLGVELVEGVTAVGVGRNSIAAVITTSRPYKKVTLEMSASMSERECPDPTGYISTTLAVIEDATGVSNLFVLDLCDTTNAQDPRDGRTSLMTAVLDNNETLVERLLVEGVDIAVTDTLNRTALLHSVISKHDAITQLLLAHHSELVRDRLNSARKV 2421
            MSR GYDGQPGQ RVSPVPGLTTAHQNASASREPSR RSLNRRRV YGSQL+GSLQ G P T AYA RVRTGGS+SSG G+E G LQGNKD HGLKFLGSLSDVFGDE VEVYLGSFHQQALISEAKKVLSQPRNRGLGVELV GV AVGVGRNSI AVITTSRPYKKVTLEMSASMSERECPDP GYISTTLAVIEDA GVSNLFVLDLCDTTNAQDPRDGRTSLMTAVLDNNE LVERLLVEGVDIAVTDTLNRTALLHSVISKHDAITQLLLAHHSELVR+RLNSARK+
Sbjct:    1 MSRHGYDGQPGQDRVSPVPGLTTAHQNASASREPSRPRSLNRRRVSYGSQLSGSLQAGAPDTRAYATRVRTGGSSSSGFGIEGGALQGNKDGHGLKFLGSLSDVFGDEMVEVYLGSFHQQALISEAKKVLSQPRNRGLGVELVAGVAAVGVGRNSIGAVITTSRPYKKVTLEMSASMSERECPDPKGYISTTLAVIEDAMGVSNLFVLDLCDTTNAQDPRDGRTSLMTAVLDNNEMLVERLLVEGVDIAVTDTLNRTALLHSVISKHDAITQLLLAHHSELVRNRLNSARKL 292

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BLAST of mRNA_Ecto-sp13_S_contig688.17852.1 vs. uniprot
Match: A0A6H5K7M8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M8_9PHAE)

HSP 1 Score: 460 bits (1184), Expect = 8.140e-143
Identity = 244/273 (89.38%), Postives = 253/273 (92.67%), Query Frame = 0

Query: 2148 PGLTTAHQNASASREPSRTRSLNRRRVRYGSQLNGSLQVGVPGTHAYANRVRTGGSASSGLGMEEGTLQGNKDEHGLKFLGSLSDVFGDETVEVYLGSFHQQALISEAKKVLSQPRNRGLGVELVEGVTAVGVGRNSIAAVITTSRPYKKVTLEMSASMSERECPDPTGYISTTLAVIEDATGVSNLFVLDLCDTTNAQDPRDGRTSLMTAVLDNNETLVERLLVEGVDIAVTDTLNRTALLHSVISKHDAITQLLLAHHSELVRDRLNSARK 2420
            PGLTTA+QNASASREPSRTRSLNRR V YGSQL+GSL+ G P + AY  RVRTGG +SSG G+E G LQGNKDEHGLK LGSLSDVFGDE VEVYLGSFHQQA+ISEAKKVLSQPRNRGLGVELV GV AVGVGR+SI AVITTS+PYKKVTLEMSAS SERECPDP GYISTTLAVIEDATGVSNLFVLDLCDTTNAQDPRDGRTSLMTAVLDNNETLVERLLVEGVDIAVTDTLNRTALLHSVISKHDAITQLLLAHHSELVRDRLN ARK
Sbjct:   13 PGLTTANQNASASREPSRTRSLNRR-VSYGSQLSGSLEAGAPDSRAYITRVRTGGLSSSGFGIEGGGLQGNKDEHGLKLLGSLSDVFGDELVEVYLGSFHQQAVISEAKKVLSQPRNRGLGVELVAGVAAVGVGRHSIGAVITTSKPYKKVTLEMSASTSERECPDPQGYISTTLAVIEDATGVSNLFVLDLCDTTNAQDPRDGRTSLMTAVLDNNETLVERLLVEGVDIAVTDTLNRTALLHSVISKHDAITQLLLAHHSELVRDRLNRARK 284

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp13_S_contig688.17852.1 vs. uniprot

BLAST of mRNA_Ecto-sp13_S_contig688.17852.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D8LMJ2_ECTSI	0.000e+0	80.92	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LMJ3_ECTSI	8.440e-144	91.44	Ankyrin repeat domain protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K7M8_9PHAE	8.140e-143	89.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1492..1521
None	No IPR available	PANTHER	PTHR14445	GRB10 INTERACTING GYF PROTEIN	coord: 1457..1517
None	No IPR available	PANTHER	PTHR14445:SF41		coord: 1457..1517
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 1376..1416 e-value: 8.7 score: 13.7 coord: 1043..1083 e-value: 470.0 score: 0.3 coord: 1272..1320 e-value: 490.0 score: 0.2 coord: 1180..1229 e-value: 180.0 score: 3.6 coord: 1231..1271 e-value: 7.5 score: 14.2
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 2350..2379 e-value: 0.49 score: 19.5 coord: 1320..1349 e-value: 580.0 score: 6.8 coord: 2383..2412 e-value: 480.0 score: 7.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 2350..2382 score: 10.659
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 1178..1467 e-value: 1.4E-20 score: 75.3 coord: 992..1145 e-value: 2.1E-5 score: 25.4
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2295..2415 e-value: 5.2E-10 score: 41.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 2320..2406
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 2350..2410 score: 13.363
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 209..307
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 1010..1425

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp13_S_contig688	contig	Ecto-sp13_S_contig688:48..22608 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp13_S_contig688.17852.1	mRNA_Ecto-sp13_S_contig688.17852.1	Ectocarpus species13 EcNAP12_S_4_19m	mRNA	Ecto-sp13_S_contig688 48..22608 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp13_S_contig688.17852.1 ID=prot_Ecto-sp13_S_contig688.17852.1|Name=mRNA_Ecto-sp13_S_contig688.17852.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=2421bp
RCASDLTDYIASDPSVSNFLGTLFGLLARGGAKNMHQRVMGTFANLAYLC
VAGGASTEWAGHLRESLKQFLLHFTETADVLGNFNLDPLEAQDRQLKFQG
VRFEIARFLWCMIRLDLCHGSSVDRLAAYISELDVLGASAGVLYENVPRT
CLKHHEVCIATPSERYASDGSGGEGGNGYDTAVANEHSGHSSGGQERAVD
ASEQMRADTVRTFALWILAHYTGRSDDRVHVASHGGLTVLTSILMGPTGL
VEAAKAGGASGDKPASKQSFINLKLAAKALANLCQAPQNAELVERAGALA
AIKALYAYISDNNDIVGNASASTQPSTSSAYGRAQMNCVPARYKIDPDFR
KAYLVIQENLWRPVVKDPVVHDDGSVTVHYEVPAGNNECFELSKRLTPLM
VERKELQICQGEVPHQINVFAEVAACLSALAMHSSVLKLFAPSGVLGPFL
ELSLEQLVPRETCLTALLDTPVKAYSQHAQVMRHLWSLIASTVLDSETDA
PESEGDDTEGNFGEDAVVQEGDSTDVSGEGAGDSTVEPKAERRRQSDAET
ASWSSRIVQKKLEQALAVRVLDRLVAGADEDAFEPTESSSTRGDDSWGSD
KIGEQDSQQPGGGKGLSIDGGAKSKRRRSSAASAPLSMLDVGRRTSAEFR
RQSLLMTSGRAYTVSGILSQQVLLSGIIVLASPTDESKDNWRRVLPSSLA
APVLSAQRRLEYFCIGLAGSVSDAVRRNWLALDGKRTNARNAMKALMELC
VDHMAVLVNKAELASFQNRTDSQTAATPEPPELSSLATQRHSNNSAEEKW
PRARHQRESLTDPPEKPDSKSAPKRGLRLSINPDVGKCRRDENGGGVGGG
GFDGNMGAAGVSGDDRRHGRDQSALFRQESSFDSAGAISALSGMSGLGVG
GGAETRGGIEAFLLPEEEQVVQMLFRAILSLLSVEEECTTAGDPRFGDGS
ENPRRQQSRTVGKNRWGSFRGREGQSRFGVEAAGDSADGAEGRGDDTTRP
SAGAAGRLDDILRLCCRLLRCGPGDGVLHVSLLAIGKILSISSRRKVNAS
ELEGVVPAVASFLERPSLWVKHACLTLLHRMASRNDLGGVVGLARGSKSR
QVIACLSNADTGTRLAAANLVGVLAKDAFYSKSIVFPEAGTPNISAVGGE
AEPALTLETLIVMSIDLHVDSHPQASLDMDGDFDVHQRSEHGCIPPLLAM
VRSGVCNTERGAASMEQEVALCVLQDLASANNLCREAIVSHGGVPVLLQA
PENYSARARRAVAGLLAELSISPGQREALKQGGGLLLLLQFQRQGRGHIC
TSRDPDERIQAELALKNFGSDSLSIHLAIASSSMEVLRKLFLRGGSTNTV
GRGLMRPIHDRQLREAAEGLAVCAMHKTSAASILSERGLPLVLDMLRVRD
FDVQYSCTRALLHLIRHNGEHFSDTMGEEDRRAAILQLTCLVRPIRERAA
RLLQTRLKEYHARQACVSQPRPSQSPKQHYQHHQQGQGQQDHHQHQKQQQ
QQQQQQQQQQQEQQARLLRNKGGDDGASVGPSTTDNAEHLLLPRIKSAIR
EQTGGRMAARPTPEPWVAKEAGCVALVLREDMPEMVRLAFQCLELLASQS
VTAVNDIMSYDVIESLTAQLHTYEMNGFYPTQVLAGKSSSKKDSTGGGSA
ANIGDGLGLSAQMAKRKRAATRLQRQCISVLSGLALNSTGSTMRPASREA
VERAMLFLAAFHWSKSVRAEAKLALRRLQSKRSLPHPTSWGVQDCLQWLS
CVDLDEICSAAHVFLYDYAADDPRPGLRIPWRVTGSGFSAASRSSREAPG
TSLDRQVSGTSSTTRKTNPVSSTDDGTEISIPRQGARAWERSQQQQWHEN
DHPKPAPVMAQCATTGACLRPGPDASCVKQSRRNSTINRNISSSWLEPER
AAIGLQRKIGTAGQRLLMVTRSDLSRAPFHTSPEVSPMFLRSLRALRLHA
FAASAMFQCGYVRPPQQDHSNDGDMYKEGDREFDAEGGVSREDFTGTGVS
QWQERLHMLRKIDRTLLRSKGNTNEIVVTDTTQDTGAVTSDTVEATDRFG
SVLTLRLVQRSPKVGQERFPATSITATTTWSREGATTLPSDLPVWSNPIL
GQALGREVSSAMSHGVSTTPGTLAVPGIQMSRQGYDGQPGQGRVSPVPGL
TTAHQNASASREPSRTRSLNRRRVRYGSQLNGSLQVGVPGTHAYANRVRT
GGSASSGLGMEEGTLQGNKDEHGLKFLGSLSDVFGDETVEVYLGSFHQQA
LISEAKKVLSQPRNRGLGVELVEGVTAVGVGRNSIAAVITTSRPYKKVTL
EMSASMSERECPDPTGYISTTLAVIEDATGVSNLFVLDLCDTTNAQDPRD
GRTSLMTAVLDNNETLVERLLVEGVDIAVTDTLNRTALLHSVISKHDAIT
QLLLAHHSELVRDRLNSARKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000225	Armadillo
IPR002110	Ankyrin_rpt
IPR011989	ARM-like
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom
IPR016024	ARM-type_fold