mRNA_Ecto-sp13_S_contig6875.17844.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: D7G5Y1_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y1_ECTSI) HSP 1 Score: 512 bits (1319), Expect = 1.100e-172 Identity = 268/272 (98.53%), Postives = 270/272 (99.26%), Query Frame = 3
Query: 33 RVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFSDEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWDP 848
RVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVF+QGDRGSSLFTVEEGELNVVKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFSDEELRQVFDRADTAKSGTLSL ELKAAFLRADPLLDESAVEEIMTMLDLDAVG VSF+EFLKIIRWDP
Sbjct: 633 RVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFSDEELRQVFDRADTAKSGTLSLDELKAAFLRADPLLDESAVEEIMTMLDLDAVGCVSFEEFLKIIRWDP 904
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: A0A6H5JE67_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE67_9PHAE) HSP 1 Score: 513 bits (1321), Expect = 2.350e-170 Identity = 267/272 (98.16%), Postives = 271/272 (99.63%), Query Frame = 3
Query: 33 RVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFSDEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWDP 848
RVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKV+NVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVF+QGDRGSSLFTVEEGELNVVKEHSGVHRTVARL PGSLFGEMALMTAQPRSASVVCAAEGGCAV+EISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATF+DEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWDP
Sbjct: 865 RVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVMNVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLPPGSLFGEMALMTAQPRSASVVCAAEGGCAVDEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFTDEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWDP 1136
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: D8LCM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCM7_ECTSI) HSP 1 Score: 295 bits (755), Expect = 6.110e-97 Identity = 176/268 (65.67%), Postives = 181/268 (67.54%), Query Frame = 3
Query: 45 MGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFSDEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWDP 848
MGPGDFF EGGVVSAQPRGESVRAV PVKVINVSLASC RMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVF+QGDRGSSLFTVEEGELNVVKEHSGVHRTV RLSPGS G A S LG+ F + A+TAKSGTLSL ELKAA LRADPLL ESAVEEIMTMLDL+AVGSVSF EFLKIIRWDP
Sbjct: 1 MGPGDFFCEGGVVSAQPRGESVRAVIPVKVINVSLASCRRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFRQGDRGSSLFTVEEGELNVVKEHSGVHRTVVRLSPGS----------------------SGTACTRCSHS------------------------------------LGARRPFRTRSCGR--SSAETAKSGTLSLAELKAALLRADPLLHESAVEEIMTMLDLNAVGSVSFQEFLKIIRWDP 208
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: A0A836CF38_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF38_9STRA) HSP 1 Score: 255 bits (651), Expect = 4.810e-75 Identity = 141/281 (50.18%), Postives = 187/281 (66.55%), Query Frame = 3
Query: 33 RVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNVVKEHSGVH-RTVARLSPGSLFGEMALMTAQPRSASVVCAAE-GGCAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLT-------ELGSEATFSDEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDESAVEEIMTMLDLDAVGSVSFDEFLKIIRWDP 848
RV MG GDFFGEGG+V PR S+RAVTP+K+I V SC RM+ G SS+LR VA SR + R K ++RA+++V + + GE V +QG+ G S++T+ +G L+V+KE + RTVA L PGS FGEMA++ QPR+A+V C+ C ++E+SG +F +LLM+R + FRRDV +++RARQFRHGVYKLL L S TFS EELR VFD D SG + L EL A R D L E V EI+ +LDLDA ++SF+EF+KII +DP
Sbjct: 467 RVDVMGAGDFFGEGGLVLNAPRSASIRAVTPIKLIRVEKDSCQRMLKTTGAASSNLREVAFSRQMVRTKALLRALNTVRRLKVRGGEVVVRQGEVGKSMYTIVDGNLDVIKESPPLAPRTVAVLKPGSYFGEMAVLLKQPRNATVACSRGCEWCVIDEVSGAEFLKLLMSRPSSFRRDVQQLMRARQFRHGVYKLLAAQEVAVPSLDSRTTFSTEELRAVFDAVDVDDSGEIELSELTEALFRVDSGLTEEGVREIIAILDLDASNTISFEEFVKIISFDP 747
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: D7FSY6_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY6_ECTSI) HSP 1 Score: 151 bits (382), Expect = 3.380e-37 Identity = 104/267 (38.95%), Postives = 149/267 (55.81%), Query Frame = 3
Query: 27 PNRVASMGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNVV---KEHSGVHRT-------VARLSPGSLFGEMALMTAQPRSASVVCAA-----EGG---------CAVEEISGDDFARLLMARRTGFRRDVMRMLRARQFRHGVYKLLTELGSEATFSDEELRQVFDRADTAKSGTLSLGELKAAFLRADPLLDE 755
P ++AS+ GD FGE ++ R +VR + V+ + + S RM+ S++LR +++ R + RAK ++RAV S+T+R L G AV QQGD G S++TV EG+L+V +E G R VA LS G +FGEMALM QPRSA+VVC++ EGG C V EI G+DF R+L + F + + ++R R FR + LLT G+E T S E++R F+ DT KSG L E+ A + + L E
Sbjct: 392 PVKLASLSSGDIFGESAMIQGGSRSATVRCASEVQAVRIGKDSLGRMMKGTKTASANLREMSILRDISRAKTLLRAVGSITQRRLPAGSAVVQQGDLGDSMYTVVEGKLDVRAKGREGEGNGRAGHPYGDKVASLSAGDVFGEMALMLKQPRSATVVCSSPTLPGEGGGTDRVPGGFCVVNEIKGEDFVRMLK-QSDSFLKSMKVIMRTRLFRRAML-LLTAAGTE-TLSKEKMRAAFEMVDTDKSGYLDANEVLEALKKLESSLGE 655
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: A0A522MW20_9BACT (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A522MW20_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 2.170e-12 Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 3
Query: 255 VHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNV-VKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLLMA 536
+ + R GE + ++GDRG+S F +EEGE+ V +HSG H +ARL PG FGE+A++T +PR+A++V A G V EIS D ++ A
Sbjct: 156 ISTTAVRSFAQGETIVREGDRGTSWFLIEEGEVEVQTTDHSGRHLVLARLGPGEFFGEVAVLTGKPRTATIV--ARNGVTVIEISRQDLDQIAAA 248
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: UPI001FD85E16 (mechanosensitive ion channel family protein n=1 Tax=Roseomonas oryzicola TaxID=535904 RepID=UPI001FD85E16) HSP 1 Score: 74.3 bits (181), Expect = 4.150e-11 Identity = 55/131 (41.98%), Postives = 71/131 (54.20%), Query Frame = 3
Query: 171 DAPGKVSSSLRRVALSRA-LFRAKN------VVRAVHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNV-VKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLLMAR 539
AP V RR L LFRA N + A+H VT + GEAV ++G G SL+ + EG L V V + G ARL PG++FGEM+L+T QPRSA+V+ A + AV E+ D LL AR
Sbjct: 203 QAPPAVEDGARRALLDATDLFRAFNAGERAALAAAMHEVT---VAEGEAVVRRGQAGDSLYLLAEGVLEVRVADADGAEFAAARLYPGAVFGEMSLLTGQPRSATVLAATDA--AVFELRKSDLDPLLRAR 328
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: UPI001F212BE4 (cyclic nucleotide-binding domain-containing protein n=1 Tax=Myxococcus stipitatus TaxID=83455 RepID=UPI001F212BE4) HSP 1 Score: 72.8 bits (177), Expect = 6.850e-11 Identity = 39/69 (56.52%), Postives = 48/69 (69.57%), Query Frame = 3
Query: 264 VTKRLLGPGEAVFQQGDRGSSLFTVEEGELNVVKEHS-GVHRTVARLSPGSLFGEMALMTAQPRSASVV 467
V R L PG V ++GDRGSS+F + EG + VV+E G RTVA+LS G FGEMALMT PR+A+VV
Sbjct: 42 VWTRFLPPGHMVVREGDRGSSMFVIVEGRVAVVRERGVGAPRTVAQLSAGEFFGEMALMTDCPRTATVV 110
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: A0A2T3MWX2_9GAMM (Sodium:proton antiporter n=1 Tax=Photobacterium lipolyticum TaxID=266810 RepID=A0A2T3MWX2_9GAMM) HSP 1 Score: 73.9 bits (180), Expect = 1.150e-10 Identity = 47/175 (26.86%), Postives = 88/175 (50.29%), Query Frame = 3
Query: 45 MGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSSLRRVALSR-------------ALFRAKNVVRAVHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNVVKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLL 530
+G GDFFGE +++ +PR V A+ +++ + + ++ A + + R+A R A + ++ + L+ PGE V +G+ G++++ + G ++V H+ + RLS G FGE+AL+T +PR+A V A+ C + + G+DF+ LL
Sbjct: 764 LGSGDFFGELALLTQEPRSADVTAIAYCQLLVLRVEDFQKITSAHPYLQERITRIASERLDPESLVAKVPLFAGLDSDHIADIASQLKPLLVAPGERVVHKGEVGNAMYFIAAGSVDVTNNHAPI-----RLSRGDFFGELALLTQEPRNADVTAASY--CELLVLQGNDFSPLL 931
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Match: A0A257UFJ4_9BACT (Cyclic nucleotide-binding domain-containing protein n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A257UFJ4_9BACT) HSP 1 Score: 71.6 bits (174), Expect = 1.740e-10 Identity = 43/123 (34.96%), Postives = 67/123 (54.47%), Query Frame = 3
Query: 171 DAPGKVSSSLRRVALSRALFRAKNVVRAVHSVTKRLLGPGEAVFQQGDRGSSLFTVEEGELNV-VKEHSGVHRTVARLSPGSLFGEMALMTAQPRSASVVCAAEGGCAVEEISGDDFARLLMA 536
DA + + R + A F + R + + R GE + ++GDRG+S F +EEGE+ V + SG H +A+L PG FGE+A++T +PR+A++V A G EIS D ++ A
Sbjct: 137 DAMARQAEKERAASRFFAEFPPAALERLISTTAVRSFAAGEKIVREGDRGASWFLIEEGEVEVQTTDSSGRHLLLAQLGPGEFFGEVAVLTGKPRTATIV--ARNGVTTIEISRQDLDQIAAA 257 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6875.17844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6875.17844.1 >prot_Ecto-sp13_S_contig6875.17844.1 ID=prot_Ecto-sp13_S_contig6875.17844.1|Name=mRNA_Ecto-sp13_S_contig6875.17844.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=269bp MGPGDFFGEGGVVSAQPRGESVRAVTPVKVINVSLASCHRMIDAPGKVSSback to top mRNA from alignment at Ecto-sp13_S_contig6875:4566..7913- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6875.17844.1 ID=mRNA_Ecto-sp13_S_contig6875.17844.1|Name=mRNA_Ecto-sp13_S_contig6875.17844.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3348bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6875:4566..7913- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6875:4566..7913- >mRNA_Ecto-sp13_S_contig6875.17844.1 ID=mRNA_Ecto-sp13_S_contig6875.17844.1|Name=mRNA_Ecto-sp13_S_contig6875.17844.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=807bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6875:4566..7913- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |