prot_Ecto-sp13_S_contig68650.17829.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig68650.17829.1
Unique Nameprot_Ecto-sp13_S_contig68650.17829.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length59
Homology
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 4.730e-30
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW SKHNTTSHSDEEC QQ
Sbjct:   99 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 157          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5K783_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K783_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 8.160e-30
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW  KHNTTSHSDEEC QQ
Sbjct:  108 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCFKHNTTSHSDEECYQQ 166          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.150e-29
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW SKHNTTSHSDEEC QQ
Sbjct:  236 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 294          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5LLS9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLS9_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 1.750e-29
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA  TKW SKHNTTSHSDEEC QQ
Sbjct:  122 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGGTKWCSKHNTTSHSDEECYQQ 180          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5KP59_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP59_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 2.380e-29
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW SKHNTTSHSDEEC QQ
Sbjct:   47 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 105          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 6.080e-29
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW SKHNTTSHSDEEC QQ
Sbjct:   99 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 157          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5KXR7_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXR7_9PHAE)

HSP 1 Score: 114 bits (284), Expect = 7.700e-29
Identity = 55/59 (93.22%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW  KHNTTSHSDEEC QQ
Sbjct:  195 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCCKHNTTSHSDEECYQQ 253          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5JQ58_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ58_9PHAE)

HSP 1 Score: 111 bits (277), Expect = 9.240e-29
Identity = 54/59 (91.53%), Postives = 55/59 (93.22%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTAS+IICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW SKHNT SHSDEEC QQ
Sbjct:   91 MATTASNIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWYSKHNTLSHSDEECYQQ 149          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.000e-28
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW SKHNTTSHSDEEC QQ
Sbjct:  254 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 312          
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 1.030e-28
Identity = 56/59 (94.92%), Postives = 56/59 (94.92%), Query Frame = 0
Query:    1 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTSHSDEECNQQ 59
            MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPA ATKW SKHNTTSHSDEEC QQ
Sbjct:   29 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEECYQQ 87          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68650.17829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZM5_9PHAE4.730e-3094.92CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K783_9PHAE8.160e-3093.22CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JF66_9PHAE1.150e-2994.92CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5LLS9_9PHAE1.750e-2993.22CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KP59_9PHAE2.380e-2994.92CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JZ53_9PHAE6.080e-2994.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXR7_9PHAE7.700e-2993.22CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQ58_9PHAE9.240e-2991.53CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L580_9PHAE1.000e-2894.92CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KMG5_9PHAE1.030e-2894.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 9..25
e-value: 1.5E-4
score: 21.7
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 10..25
score: 9.373
NoneNo IPR availableGENE3D4.10.60.10coord: 3..58
e-value: 2.8E-6
score: 29.4
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 5..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig68650contigEcto-sp13_S_contig68650:189..365 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig68650.17829.1mRNA_Ecto-sp13_S_contig68650.17829.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig68650 189..365 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig68650.17829.1 ID=prot_Ecto-sp13_S_contig68650.17829.1|Name=mRNA_Ecto-sp13_S_contig68650.17829.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=59bp
MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAEATKWSSKHNTTS
HSDEECNQQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf