mRNA_Ecto-sp13_S_contig6836.17792.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6836.17792.1
Unique NamemRNA_Ecto-sp13_S_contig6836.17792.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Match: D8LL32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL32_ECTSI)

HSP 1 Score: 1326 bits (3432), Expect = 0.000e+0
Identity = 900/1156 (77.85%), Postives = 931/1156 (80.54%), Query Frame = 1 
Query:    1 MAAVRCYLRDGDPLFIRSNLSKLEAGTLTHLAVGDTVRVARRCRGENKEGGQGIVLAALPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSRWGRSAXXXXXXXXXXXXXXXXXXXXMSSLPSYLRGGGGSPSGSPQSPPEIAVPRGGFRRDRERAHPLKRPRPTGSSQEAKEREKARPDPPRQRAGGGVPGVPPRACGGGGSVELKKAAVNERSSSLQSGEGGQGMDVEDDGIARREVSHGDTVGSEAVQGGAGESAXXXXXXXXXGREGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGSSDGEVPSQGPNAAANGTLRRGGVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SQPSSNRDVWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCRQECEYFTSRSRAVQQGLYPLE-RSEEDEGLGGSSRGKERXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVDDRERGHADSQTRRRHLPQDWDEEGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAGGITAPQRRRRIGRRLAVXXXXXXXXXXXXXXXXXXXXXXXXSDISDAGSQYDDD-HDHDDSDIDLLYVRQGVRGHGGTLRPRDRRSQRSRGCDSSGGGASVTEQESGLEQGEEEGEGEMSVSSESGRSGGGEEGVVGGGFLQAEGDEDELPPDIQDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATAPGASSTSALVSSLRADLQDLLDRRDQDRGEGGRRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTRGENDRGGGSGWGRRGGAALRPAPRLNALAGAVAXXXXXXXXXXGLLLLLSTPGITADGAARSTAAA-AGVDVEVETGA*AAADDKALRELYDRTLAQQLTRGGRPVIGAGGGVAAITGGRPGSAAAGQEEGERSGVWKREERRRESVGRXXXXXXREGRGSPGPRPL--PVLVDGVVAAANPRRAALSFDTLFAKTCSATTAAVGMDGNSGRMLEASGIDPCFVARDPTCGSDGGGGSSGDGGEIARALGMLPQRMTDVEELARSHGLQDE 3450
            MAAVRCYLRDGDPLFIRSNLSKLEAGTLT LAVGDTVRVARRCRGENKEGGQGIVLA LPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCG CNSFESECTCQAPSR GRSAXXXXXXXXXXXXXXXXXX  MSSLPSYLRGGGGSPS SPQSP EIAVP G FRR RERAHPLKRPRP GSSQEAKERE+ARPDPPR++AGGGVPGVPPR  G    VELKKAAV++RSSSLQSGEGGQGMDVEDDG+ RR+VSHGDT GS AV GGAGESA         G EGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGS D E+PS GP+A A GTLRRGGVV+               X              SQPSS+RDVWRP+KKELVEVARR APGMNKLGGTARVVKVDPATGLVDVR+VVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDC+QECEYFTSR RA QQGLY +E RSE              XXXXXXXXXXXXXXXX           GD+DDRERGHADSQTRRRHLPQDWDEEGEP     XXXXXXXXXXXXXXXXXXXXXXXXXXX              IGRRLAV                        SD S AGSQYDD  HDHD SDIDLLYV+ GVRGHGGTL PRDRRSQRSRG DSSGGGAS TEQ+SGLEQGEEEGEGEMSVSSESGRSGGG+EG VGG FLQAEGDEDELPPDI+DPTRGVKDPGVLQARLEELLKQME GDVTKLEEDVAAACRCVESATAPGA+ST+ALVSSLRADLQDLLDRRDQ  GEGGRRG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               GRRG AALRPAPRLNALAG   XXXXXXXXXX                        AGVDVE+ETG  AAADDKALR+LYDRTLAQQL RGG PVIGAGGGVAAITGGR GSAAAGQ EGERSGV +REE RR+  GR  XXXX              PVL+DGVVAAANPRRAALSFDTLFAKTCSATTAAVGM+G+SGRMLEASG+DPCFVA+D TCGSDGGGGSSGDGGEIARALGMLPQRM DVEELARSHGLQDE
Sbjct:    1 MAAVRCYLRDGDPLFIRSNLSKLEAGTLTRLAVGDTVRVARRCRGENKEGGQGIVLAVLPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGTCNSFESECTCQAPSRGGRSAXXXXXXXXXXXXXXXXXXS-MSSLPSYLRGGGGSPSVSPQSPKEIAVPGGAFRRGRERAHPLKRPRPAGSSQEAKEREEARPDPPRKQAGGGVPGVPPRVWGXXXGVELKKAAVDDRSSSLQSGEGGQGMDVEDDGLPRRKVSHGDTFGSGAVPGGAGESATAAAAE---GTEGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGSHDREIPSHGPDAPAKGTLRRGGVVDSSNHDPVEGGVGGVGXGSDGNRRDPGEEEESQPSSSRDVWRPRKKELVEVARRMAPGMNKLGGTARVVKVDPATGLVDVRFVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCQQECEYFTSRPRATQQGLYLIEERSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRSRASQEEGGDIDDRERGHADSQTRRRHLPQDWDEEGEPVPGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----IGRRLAVSSSGSDEGTADDAEVPNRRRLGDRSDGSYAGSQYDDHGHDHD-SDIDLLYVQPGVRGHGGTLHPRDRRSQRSRGRDSSGGGASDTEQDSGLEQGEEEGEGEMSVSSESGRSGGGDEGGVGGAFLQAEGDEDELPPDIRDPTRGVKDPGVLQARLEELLKQMEAGDVTKLEEDVAAACRCVESATAPGATSTAALVSSLRADLQDLLDRRDQFGGEGGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGAAALRPAPRLNALAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVDVEMETGERAAADDKALRQLYDRTLAQQLARGGPPVIGAGGGVAAITGGRSGSAAAGQAEGERSGVREREEGRRDFAGRGGXXXXXXXXXXXXXXXXXXPVLMDGVVAAANPRRAALSFDTLFAKTCSATTAAVGMNGSSGRMLEASGVDPCFVAQDTTCGSDGGGGSSGDGGEIARALGMLPQRMADVEELARSHGLQDE 1146
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BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Match: A0A6H5K8X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X1_9PHAE)

HSP 1 Score: 1153 bits (2983), Expect = 0.000e+0
Identity = 862/1359 (63.43%), Postives = 888/1359 (65.34%), Query Frame = 1 
Query:    1 MAAVRCYLRDGDPLFIRSNLSKLEAGTLTHLAVGDTVRVARRCRGENKEGGQGIVLAALPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSRWGRSAXXXXXXXXXXXXXXXXXXXXMSSLPSYLRGGGGSPSGSPQSPPEIAVPRGGFRRDRERAHPLKRPRPTGSSQEAKEREKARPDPPRQRAGGGVPGVPPRACGGGGSVELKKAAVNERSSSLQSGEGGQGMDVEDDGIARREVSHGDTVGSEAVQGGAGESAXXXXXXXXX--GREGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGSSDGEVPSQGPNAAANGTLRRGGVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---QPSSNRDVWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCRQECEYFTSRSRAVQQGLYPLERSEEDEGLGGSSRGKERXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVDDRERGHADSQTRRRHLPQDWDEEGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAGGITAPQRRRRIGRRLAVXXXXXXXXXXXXXXXXXXXXXXXXSDISDAGSQYDDDHDHDDSDIDLLYVRQGVRGHGGTLRPRDRRSQRSRGCDSSGGGASVTEQESGLEQGEEEGEGEMSVSSESGRSGGGEEGVVGGGFLQAEGDEDELPPDIQDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATAPGASSTSALVSSLRADLQDLLDRRDQ-----DRGEGGRRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTRGENDRGGG--------------------------------------------------------------SGWGRRGGAALRP-------------------------------------------------------------------------------------------------------APRLNALAGAVAXXXXXXXXXXGLLLLLSTPGITAD-GAARSTAAAAGVDV---EVETGA*AAADDKAL--------RELYDRTLAQQLTRGGRPVIGAGGGVAAITGGRPGSAAAGQEEGERSGVWKREERRRESVGRXXXXXXREGRGSPGPR----PLPVLVDGVVAAANPRRAALSFDTLFA------------------KTCSATTAAVGMDGNSGRMLEASGIDPCFVARDPTCGSDGGGGSSGDGGEIARALGMLPQRMTDVEELARSHGLQDE 3450
            MAAV+CYLRDGDPLFIRSNLSKLEAGTLT LAVGDTVRVARRCRGENKEGGQGIVLA LPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSR GRSAXXXXXXXXXXXXXXXXXX  MSSLPSYLRGGGGSPSGSPQS  E AVPR GFRR+RERAHPLKRPRP GSSQEAKERE ARPDPPR+RAGGGV GVPPR  G    VELKKAAV++ SSSLQSG+GGQGMDVEDD + RREVSHGDT GS AVQGGAGESA  XXXXXXX  GREGDQTPPQLSKR DKDSG      EAIWTEHAQGS  GE+PS GP+AAANGTL RGGVV+         XXXXXXXXXXXXXXXXXXXX    Q SS+RDVWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDC+QECEYFTSR RA QQGLY +ERSEED G GGSS GK  XXXXXXXXXXXXXXXXXX         GDVDDRERGHADSQTRRRHLPQDWDEEGEP   XXXXXXXXXXXXXXXXXXXXXXXXXX      GGITAPQ+RRRIG RLA+                        SD SDAGSQYD       SDIDLLYVR GVRGHGGTLRPRDRRSQRSRG DSS GG SVT+QESGLEQ                         VGG FLQAEGDEDELPPDI+DPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATAPGASST+ LVSSLRADLQDLLDRRDQ     D  E   R                                     T  R     G                                                                SGWGRR G  +                                                                                                         A R  A   +V    XXXXXXX             D G +R     AG D       TG   A   +          RELYDRTLA+QL RGGRPVI AGGGVAA  GGRPGSAAAGQ EGERSGVW+REERRRESVGR XXXXX              PLP LVDGV AAANPRRAALSFDTLFA                  KTCSA TAAVGMDG+SGRMLEASG+DPCFVARD TCGSDG      DGGEIARALGMLPQRM DVEELARSHGLQDE
Sbjct:    1 MAAVKCYLRDGDPLFIRSNLSKLEAGTLTRLAVGDTVRVARRCRGENKEGGQGIVLAVLPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSRGGRSAXXXXXXXXXXXXXXXXXX--MSSLPSYLRGGGGSPSGSPQS--ETAVPRAGFRRERERAHPLKRPRPAGSSQEAKEREGARPDPPRKRAGGGVSGVPPRVWGXX-XVELKKAAVDDSSSSLQSGKGGQGMDVEDDRLPRREVSHGDTFGSGAVQGGAGESATAXXXXXXXAEGREGDQTPPQLSKRCDKDSGXXXXXDEAIWTEHAQGSHGGEIPSHGPDAAANGTLHRGGVVDSGNHDPADGXXXXXXXXXXXXXXXXXXXXXXXFQASSSRDVWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCQQECEYFTSRPRATQQGLYLMERSEEDGGPGGSSLGKXXXXXXXXXXXXXXXXXXXXRSQASQEEGGDVDDRERGHADSQTRRRHLPQDWDEEGEPVPGXXXXXXXXXXXXXXXXXXXXXXXXXX-----VGGITAPQQRRRIGLRLALSSSDSDEGTADDAGVPNRRRLGDGSDGSDAGSQYDXXXXXXXSDIDLLYVRPGVRGHGGTLRPRDRRSQRSRGRDSSVGGGSVTDQESGLEQXXXXXXXXXXXXXXXXXXXXXXXXXVGGAFLQAEGDEDELPPDIRDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATAPGASSTATLVSSLRADLQDLLDRRDQVRQTSDVAENIYRRLRRLARSWHDGSGGEGVWLRLASLSQRLEDLRKAALTGIRDCESSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGWGRREGRQVEAXXXXXXXXXXXXRQVAGLDYDMPAVAVDSADDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGRSGXXXXXXXARRRGASCSSVNPRHXXXXXXXXXXXXXXXXRXXXDRGKSRGRRQGAGNDGLFGPSSTGGACARQPRMFPINGRALQRELYDRTLARQLARGGRPVIRAGGGVAAKNGGRPGSAAAGQAEGERSGVWEREERRRESVGRGXXXXXXXXXXXXXXXXXXXPLPALVDGVGAAANPRRAALSFDTLFAVRAADRARCRRTSCTGSVKTCSAKTAAVGMDGSSGRMLEASGVDPCFVARDTTCGSDG------DGGEIARALGMLPQRMADVEELARSHGLQDE 1343
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BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Match: T0RV44_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RV44_SAPDV)

HSP 1 Score: 60.1 bits (144), Expect = 3.360e-5
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 1 
Query: 1189 ELVEVARRTAPGMNKLGGTARVVKV--DPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRA 1377
            +LVEV  RT PG+NK+GG ARV+ V  D     VDVRY + GG E+ +D  YV+P+  DM++KRA
Sbjct:   73 DLVEVETRTWPGINKIGGAARVISVYSDGGDTFVDVRYFL-GGSEKRVDVAYVQPS--DMHQKRA 134
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BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Match: A0A067C220_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C220_SAPPC)

HSP 1 Score: 58.5 bits (140), Expect = 9.900e-5
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 1 
Query: 1189 ELVEVARRTAPGMNKLGGTARVVKV--DPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRA 1377
            +LVEV  RT PG+NK+GG ARV+ V  D     VDVRY + GG E+ +D  YV+P+  D+++KRA
Sbjct:   76 DLVEVETRTWPGINKIGGAARVISVYSDGGDTFVDVRYFL-GGSEKRVDVAYVQPS--DIHQKRA 137
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LL32_ECTSI0.000e+077.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8X1_9PHAE0.000e+063.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
T0RV44_SAPDV3.360e-552.31Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
A0A067C220_SAPPC9.900e-550.77Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6836contigEcto-sp13_S_contig6836:1455..7496 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score60.1
Seed ortholog evalue6.6e-06
Seed eggNOG ortholog112098.XP_008610484.1
Model size3450
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.function. Source PGD
EggNOG OGs29J8N@1,2RSGS@2759
Cds size2880
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6836.17792.1prot_Ecto-sp13_S_contig6836.17792.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6836 1455..6422 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463939.5618956-CDS-Ecto-sp13_S_contig6836:1454..15791681463939.5618956-CDS-Ecto-sp13_S_contig6836:1454..1579Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6836 1455..1579 +
1681463939.5767462-CDS-Ecto-sp13_S_contig6836:2131..22641681463939.5767462-CDS-Ecto-sp13_S_contig6836:2131..2264Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6836 2132..2264 +
1681463939.5877829-CDS-Ecto-sp13_S_contig6836:2602..47431681463939.5877829-CDS-Ecto-sp13_S_contig6836:2602..4743Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6836 2603..4743 +
1681463939.5997765-CDS-Ecto-sp13_S_contig6836:5271..53711681463939.5997765-CDS-Ecto-sp13_S_contig6836:5271..5371Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6836 5272..5371 +
1681463939.6108813-CDS-Ecto-sp13_S_contig6836:5785..59781681463939.6108813-CDS-Ecto-sp13_S_contig6836:5785..5978Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6836 5786..5978 +
1681463939.6222134-CDS-Ecto-sp13_S_contig6836:6234..64221681463939.6222134-CDS-Ecto-sp13_S_contig6836:6234..6422Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6836 6235..6422 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463939.633394-UTR-Ecto-sp13_S_contig6836:6422..64461681463939.633394-UTR-Ecto-sp13_S_contig6836:6422..6446Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6836 6423..6446 +
1681463939.6444595-UTR-Ecto-sp13_S_contig6836:6535..68501681463939.6444595-UTR-Ecto-sp13_S_contig6836:6535..6850Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6836 6536..6850 +
1681463939.6545916-UTR-Ecto-sp13_S_contig6836:7265..74961681463939.6545916-UTR-Ecto-sp13_S_contig6836:7265..7496Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6836 7266..7496 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6836.17792.1

>prot_Ecto-sp13_S_contig6836.17792.1 ID=prot_Ecto-sp13_S_contig6836.17792.1|Name=mRNA_Ecto-sp13_S_contig6836.17792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=960bp
MAAVRCYLRDGDPLFIRSNLSKLEAGTLTHLAVGDTVRVARRCRGENKEG
GQGIVLAALPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGR
CNSFESECTCQAPSRWGRSAAAAAAAAAEEAALAAAKKASMSSLPSYLRG
GGGSPSGSPQSPPEIAVPRGGFRRDRERAHPLKRPRPTGSSQEAKEREKA
RPDPPRQRAGGGVPGVPPRACGGGGSVELKKAAVNERSSSLQSGEGGQGM
DVEDDGIARREVSHGDTVGSEAVQGGAGESAAAAAAAAAEGREGDQTPPQ
LSKRYDKDSGGGDDDAEAIWTEHAQGSSDGEVPSQGPNAAANGTLRRGGV
VESGNNDPADGGGGGGGGSDGNRRDPGEEEESQPSSNRDVWRPQKKELVE
VARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPA
TLDMNEKRATFGRCVHCGSLRVDCRQECEYFTSRSRAVQQGLYPLERSEE
DEGLGGSSRGKERRRAERDQHRRRRRRRHNGRSRASQEEGGDVDDRERGH
ADSQTRRRHLPQDWDEEGEPVPGSSEEEEKEEEEEREDRVADRDSSSSGS
NSDSAGGITAPQRRRRIGRRLAVSSSGSDEGTADDAGVPYRRRLGDRSDI
SDAGSQYDDDHDHDDSDIDLLYVRQGVRGHGGTLRPRDRRSQRSRGCDSS
GGGASVTEQESGLEQGEEEGEGEMSVSSESGRSGGGEEGVVGGGFLQAEG
DEDELPPDIQDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACR
CVESATAPGASSTSALVSSLRADLQDLLDRRDQDRGEGGRRGKKRPRRRA
SSDGGKERRRRAAARPRAGAIEEEGDDGTSTRGENDRGGGSGWGRRGGAA
LRPAPRLNALAGAVAAAAALVLAAVGLLLLLSTPGITADGAARSTAAAAG
VDVEVETGA*
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mRNA from alignment at Ecto-sp13_S_contig6836:1455..7496+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6836.17792.1 ID=mRNA_Ecto-sp13_S_contig6836.17792.1|Name=mRNA_Ecto-sp13_S_contig6836.17792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6042bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6836:1455..7496+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGCGGTGAGGTGCTACCTGCGGGACGGCGACCCTCTGTTCATCCG
TTCGAACCTTTCCAAGCTGGAGGCCGGCACGCTGACGCATCTCGCAGTCG
GGGACACCGTCAGAGTGGCGAGACGGTGAGGCTGCGACTCGGGTGGCTAC
AGTACTGTAGAAAATGACCGCTTCGATGCCGCAGGAGCAGGAGCGGCCAG
CGTTGAGGCATTCGGTGGGAAATACCACACGTGCTTGGTGTCCCGTGGGC
ACCCGCAGCTTTGTACATGTCGCATTTGCTCAACCAAGTACATAACGTCC
TATACGGGGGATACGACGGTTTTCGCTCTACCGGCCGCCTCTTGGTATTG
GGTGTATAGCCCTTGTGGAGAGGAAAACGTCCTCAGCAAACGCATGAAGG
ACGGCGAAGCAGCAGCAGTGCCTTGCACACTCTGCGAAGTGAAGTCCTAC
GAAGGTTGTTGGAAATGTTCGCGCGGCAGAGACTGCTGCTCTCGTGGCAC
ACGTTACTCTTTCCTACCAGATGTGGGTTGTGGCGGGACGGCGCGTGCCT
GCCGGGGTTTGGGTATGCTTTTTGAAGCGCTCACGTAGTATCGCGGGGTC
CCCCCTCCCCCCTAGATCATGTTCCTTTCGACGATATCTAACCCCCAAGG
CTATGATGTTCCGTTTCGTGCGGCCAGGTGTCGCGGGGAGAATAAGGAGG
GAGGGCAGGGCATCGTGCTGGCCGCGCTACCGGAATATTTCTACGATGTC
AAGTACGTCGGTGGTGTCGAGTACGGCGTCGACGCCTGCTTCGTGGAGAA
GATCAAACTGGTGCGATTGTGGTGCTTGTCTGTCTCAGGGCGCTTGTGGT
ACACACGACTCGACAAGATGACAAATTAATGCAGTTTGTTTTTCTCCGTC
CAGGATAGCGTTGTTTGTTATAGATCCAGGATGTTCGTGCGTTTTTTAGG
GATATCACCTCTGGTGCCTGCACCGGCGGGTGGGACAAAACAGAGTTTCG
GAAAACGCTGCCTTGTTTAGGCTGCATGTCCTTCTTCTGAACGCTCGCAC
AATCATCCTCTGAATTTTTTTTCGCCGGTGATGTCAACGCAATAACCGAT
ATTTCCTCCGTGGATCTATAGCACATCCCCCGATCACCACCGCAACAGGG
AAGCACGAAGCGCAGAGGCGGGACCTCCAGATGCGGCAGGTGCAACTCCT
TCGAGTCCGAGTGCACCTGCCAGGCACCGTCCCGCTGGGGGCGGTCTGCC
GCGGCGGCGGCGGCGGCGGCGGCGGAGGAAGCGGCGCTGGCGGCCGCAAA
GAAGGCGTCCATGTCGTCCCTGCCGTCGTACCTTCGCGGCGGCGGCGGCT
CACCGTCGGGATCACCGCAATCTCCTCCGGAGATTGCGGTCCCGAGGGGG
GGCTTTCGAAGGGATCGGGAGCGAGCCCACCCTCTCAAGAGACCCCGACC
CACCGGAAGCAGCCAGGAGGCCAAGGAGAGGGAGAAAGCCAGGCCAGACC
CACCGAGACAGCGGGCTGGTGGCGGGGTACCAGGGGTTCCGCCGCGTGCG
TGTGGGGGTGGGGGTAGCGTAGAACTGAAGAAGGCCGCCGTAAACGAGAG
GAGTAGTTCTCTTCAATCCGGCGAAGGGGGACAGGGTATGGATGTGGAGG
ACGATGGGATAGCAAGGCGCGAGGTTAGCCACGGAGATACCGTCGGTAGT
GAGGCGGTGCAGGGCGGAGCAGGTGAGAGCGCCGCCGCCGCCGCCGCCGC
CGCGGCCGAAGGAAGAGAAGGAGACCAAACACCGCCCCAGCTTTCGAAAC
GGTACGACAAAGACTCCGGCGGGGGTGATGACGATGCCGAGGCGATCTGG
ACGGAGCATGCCCAAGGAAGTAGTGACGGAGAGGTGCCCTCCCAAGGACC
CAACGCCGCCGCGAACGGCACGTTGCGTCGCGGCGGTGTTGTCGAAAGTG
GCAATAACGACCCCGCGGATGGCGGCGGCGGCGGCGGCGGCGGAAGCGAT
GGAAATCGGCGAGACCCTGGAGAGGAGGAAGAGTCCCAGCCGTCGTCTAA
CCGAGACGTGTGGCGGCCTCAAAAGAAGGAACTGGTCGAGGTGGCGCGAC
GCACCGCGCCGGGGATGAATAAGCTCGGAGGTACCGCGCGCGTGGTGAAG
GTCGACCCGGCCACCGGTCTGGTGGACGTCCGGTACGTCGTGGAGGGGGG
CTGGGAGCGGAACATCGACCCTGTGTACGTGCGCCCGGCCACCCTGGACA
TGAACGAGAAGCGAGCCACGTTTGGTAGGTGCGTCCATTGCGGCAGCCTG
CGCGTGGACTGCCGACAGGAGTGCGAGTACTTCACCTCGCGATCCCGGGC
AGTGCAGCAAGGCTTGTACCCCCTGGAGAGAAGCGAGGAAGACGAGGGTC
TAGGAGGGAGCTCCCGCGGAAAGGAGCGGCGGCGCGCTGAGCGCGACCAA
CACCGTCGTCGGCGTCGTCGGCGTCACAATGGTCGTTCACGGGCGTCGCA
GGAGGAGGGCGGTGATGTCGACGACCGAGAGAGGGGGCACGCGGATAGCC
AAACGCGACGGCGGCATCTGCCCCAAGACTGGGACGAGGAAGGGGAGCCC
GTTCCAGGTAGCAGCGAGGAGGAAGAGAAGGAGGAGGAGGAGGAGAGAGA
AGATAGAGTCGCCGACCGAGATAGTAGTAGCAGCGGTAGCAACAGCGACA
GTGCGGGGGGGATTACCGCGCCGCAGCGAAGAAGACGAATCGGTCGGCGA
CTGGCCGTCAGCAGCAGCGGCAGCGACGAAGGGACAGCGGACGACGCCGG
GGTTCCTTACCGTCGGAGGCTGGGGGATCGATCCGACATAAGCGATGCCG
GAAGCCAGTACGACGACGACCACGATCACGACGACTCCGATATCGACCTC
CTGTATGTCCGGCAGGGTGTCCGCGGCCACGGCGGGACTCTTCGCCCTCG
TGATCGTCGTAGCCAACGAAGCCGCGGATGTGACAGCAGTGGCGGAGGAG
CCAGTGTTACCGAGCAAGAGTCGGGGCTAGAACAGGGCGAGGAGGAGGGA
GAGGGAGAGATGAGCGTCTCCTCTGAATCGGGCCGCAGCGGTGGTGGTGA
GGAGGGGGTCGTCGGGGGGGGGTTCCTGCAGGCGGAGGGGGACGAGGACG
AGCTCCCGCCGGACATTCAGGATCCCACGAGAGGGGTCAAGGACCCCGGC
GTGCTCCAGGCGAGGCTCGAGGAGTTGCTGAAGCAGATGGAGACGGGCGA
CGTGACGAAGCTGGAGGAAGACGTTGCTGCGGCGTGCCGGTGAGAGACTC
GCTCCGGGGCGGTAGTACATGTAGCGGTATGGGGTGCGAATGTTTACGTT
GTGGCTCTGGGTGTGTGCTCTTCGTTTCAGTCTTATTATCTCATTGTTCC
GTGGCCGCTCGATTACGAAAGAGCTAATTCTGTAACAGCATCCGGCAGAA
GAACGTCTCCGCGCTTTGGTGTCAAGGCTGGACCGGAAATATTCGGCACG
AAAAACGTCGTGCGTTTGGTTCTTGGTCGGCCACTGATACAACTCAACGG
CTACCGCTGCCTAGGGCCTTGCCTTTTCGGGGTTATGTTTTCTTGAATGG
AAACGAACAAGGCGCTCCTCGGAACCTGGCCGACACCTCACGGCTTCATG
CAAGCACGTTGCTATTTTTTCCCGCTCACCCGGTCCTCCTCCTTGGTCTA
TGCCATGTGCCTCCCTTTCGTACGCGACACACGTCTGTCTGGGTGCTTAA
GACCCAACAACGATGCCTGTACCTCTTCTCTCGCAATACCACCGCCCACG
AAAAAAAAACACGTCAGGTGCGTGGAGTCGGCGACCGCGCCCGGCGCCAG
CAGCACATCCGCCTTAGTCTCCTCCCTCAGAGCCGACCTGCAGGACCTCT
TGGACCGGCGTGACCAGGTGAGGCAGACGTCGGACGTCGCCGAGAACATC
TACCGCCGCCTGAGGAGGCTCGCCAGGAGCTGGCACGACGGTAGCGGCGG
GGAGGGCGTCTGGCTCCGGCTGGCGAGCCTCTCGCAGAGGCTAGAAGACC
TGAGAAAGGCCGCCCTGACGGGCATCCGCGACTGCGAGAGCTCCGCCGTC
GCTGCCGCCTGGAGCGACGGGGGCGGGGGCTCCGCGGAATCTGGTTCGTC
CTCCTCGGAGGGCTCCCGTTCGGATGACGAGTTCAGCCTCGGACCGAGCC
GGCCCCGTCAGCAGCCGCAACCGGCCGCAAGGGTAAAAATAAGGAAGCCA
CGTCGAAGCAGTGCTGGTGATACTCGTCTTTCTGGTCGTGGCGGCGGCGG
CGGCGGCAGCGGCGGCGGGGGGGGTGGTGAGGACCGCGGGGAGGGGGGGC
GTCGAGGCAAGAAGCGTCCCCGACGGCGGGCATCTTCCGACGGCGGGAAG
GAGAGGAGGAGGCGCGCCGCCGCTCGTCCTCGCGCCGGGGCTATCGAAGA
AGAAGGCGACGACGGGACCAGCACCCGTGGGGAGAATGACCGTGGTGGAG
GGTCGGGGTGGGGAAGAAGAGGAGGTAGGCAGGTGGAGGCGATGGAGGAA
GAAGAAGAAGAAGAAGAAGAAGGAGAGCGTCAAGTGGCCGGGCTTGACTA
CGACATGCCGGCGGTGGCCGTCGACTCGACCGATGACAGCGGGGGTGACG
GGGGCCGGAGCTCGGCAGACTCGTCTGATTCTGGGTCGTCCCCCTATTCG
TCGTCTTCATCGACGGCCGAAACAGCTTCGCCGCCGTCGCCGCTGAGGCC
GTCCCGCCCGCCCGCACCGCCTGGCGGCAGGCGCGGCGCTCAGACCGGCT
CCACGGCTAAACGCTCTGGCAGGAGCGGTGGCGGCGGCGGCGGCGCTGGT
GCTCGCCGCTGTGGGTCTTCTTCTTCTTCTGTCAACCCCCGGCATCACCG
CCGACGGGGCGGCGAGAAGCACGGCGGCGGCGGCGGGGGTGGACGTGGAG
GTGGAGACCGGGGCGTGAGCCGCGGCAGACGACAAGGCGCTGGTAACGAC
GGGCTGTTTGGGCCATCGTCGACGGGGGGAGCGTGTGCACGGCAACCGAG
GATGTTTCCGATAAACGGCCGGGCGTTGCAGAGGGAGCTGTACGACAGGA
CCCTGGCGCAGCAGCTAACTCGAGGCGGGCGGCCGGTGATCGGGGCGGGC
GGCGGCGTGGCCGCGATCACCGGCGGACGCCCGGGCAGTGCGGCCGCCGG
CCAAGAGGAGGGCGAGCGGAGCGGGGTTTGGAAGCGCGAGGAGCGGAGGA
GGGAATCCGTCGGGCGCGGCGGCGGCGGCGGCGGAAGAGAAGGCCGCGGC
AGTCCGGGGCCCCGTCCGCTACCTGTGCTGGTGGACGGGGTGGTGGCGGC
GGCCAACCCCCGGCGGGCAGCGCTCAGTTTTGATACCTTGTTTGCGGTGA
GAGCGGCCGACCGCGCCAGATGCAGACGGACAACCTGTACGGGGTCCGTG
GTTTGTTGATGAGGTCGCTGTTCTGTCATGTGCTAGTTCTGGATGTTTTG
GGTCACTGGAGGCCGTGATTGCTCGAGGAGCCCCGCTTGCTCCAACCGCA
TGGTTGCTAGGGGCAGGTGCAGGATGCTTTTTTTTTGACAGCCGGCGTGT
TGCCACGGCAAGTAGCGACTTGGCGTAGAGCCTGACTGCCGCACCGATGT
ACGTGCTCTTCGGTTTTGTTCTGCCGCGACATTCGGTAGACCGTTTCCCC
CGCTTTCGCTCTCCCTCTTCCCCTCCCCCTTCCCCTTGCTTTCTCTTACT
CCTGCCCCTCCTCCCTCCCCCTCCCCCCGTCGCGTTGCTCTGTTCCGTCA
CCGTCTCGAAGAAAACTTGCTCTGCCACAACTGCGGCGGTCGGCATGGAC
GGCAACAGCGGCCGCATGCTTGAGGCGAGTGGCATCGACCCGTGCTTCGT
GGCTCGAGACCCGACTTGCGGCAGCGATGGTGGCGGTGGCAGTAGTGGTG
ACGGTGGAGAGATCGCTCGAGCGCTCGGCATGTTGCCGCAACGGATGACC
GACGTGGAGGAGCTCGCGAGGTCGCACGGTCTGCAAGACGAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6836:1455..7496+

>mRNA_Ecto-sp13_S_contig6836.17792.1 ID=mRNA_Ecto-sp13_S_contig6836.17792.1|Name=mRNA_Ecto-sp13_S_contig6836.17792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=2880bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6836:1455..7496+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCGGCGGTGAGGTGCTACCTGCGGGACGGCGACCCTCTGTTCATCCG
TTCGAACCTTTCCAAGCTGGAGGCCGGCACGCTGACGCATCTCGCAGTCG
GGGACACCGTCAGAGTGGCGAGACGGTGTCGCGGGGAGAATAAGGAGGGA
GGGCAGGGCATCGTGCTGGCCGCGCTACCGGAATATTTCTACGATGTCAA
GTACGTCGGTGGTGTCGAGTACGGCGTCGACGCCTGCTTCGTGGAGAAGA
TCAAACTGGGAAGCACGAAGCGCAGAGGCGGGACCTCCAGATGCGGCAGG
TGCAACTCCTTCGAGTCCGAGTGCACCTGCCAGGCACCGTCCCGCTGGGG
GCGGTCTGCCGCGGCGGCGGCGGCGGCGGCGGCGGAGGAAGCGGCGCTGG
CGGCCGCAAAGAAGGCGTCCATGTCGTCCCTGCCGTCGTACCTTCGCGGC
GGCGGCGGCTCACCGTCGGGATCACCGCAATCTCCTCCGGAGATTGCGGT
CCCGAGGGGGGGCTTTCGAAGGGATCGGGAGCGAGCCCACCCTCTCAAGA
GACCCCGACCCACCGGAAGCAGCCAGGAGGCCAAGGAGAGGGAGAAAGCC
AGGCCAGACCCACCGAGACAGCGGGCTGGTGGCGGGGTACCAGGGGTTCC
GCCGCGTGCGTGTGGGGGTGGGGGTAGCGTAGAACTGAAGAAGGCCGCCG
TAAACGAGAGGAGTAGTTCTCTTCAATCCGGCGAAGGGGGACAGGGTATG
GATGTGGAGGACGATGGGATAGCAAGGCGCGAGGTTAGCCACGGAGATAC
CGTCGGTAGTGAGGCGGTGCAGGGCGGAGCAGGTGAGAGCGCCGCCGCCG
CCGCCGCCGCCGCGGCCGAAGGAAGAGAAGGAGACCAAACACCGCCCCAG
CTTTCGAAACGGTACGACAAAGACTCCGGCGGGGGTGATGACGATGCCGA
GGCGATCTGGACGGAGCATGCCCAAGGAAGTAGTGACGGAGAGGTGCCCT
CCCAAGGACCCAACGCCGCCGCGAACGGCACGTTGCGTCGCGGCGGTGTT
GTCGAAAGTGGCAATAACGACCCCGCGGATGGCGGCGGCGGCGGCGGCGG
CGGAAGCGATGGAAATCGGCGAGACCCTGGAGAGGAGGAAGAGTCCCAGC
CGTCGTCTAACCGAGACGTGTGGCGGCCTCAAAAGAAGGAACTGGTCGAG
GTGGCGCGACGCACCGCGCCGGGGATGAATAAGCTCGGAGGTACCGCGCG
CGTGGTGAAGGTCGACCCGGCCACCGGTCTGGTGGACGTCCGGTACGTCG
TGGAGGGGGGCTGGGAGCGGAACATCGACCCTGTGTACGTGCGCCCGGCC
ACCCTGGACATGAACGAGAAGCGAGCCACGTTTGGTAGGTGCGTCCATTG
CGGCAGCCTGCGCGTGGACTGCCGACAGGAGTGCGAGTACTTCACCTCGC
GATCCCGGGCAGTGCAGCAAGGCTTGTACCCCCTGGAGAGAAGCGAGGAA
GACGAGGGTCTAGGAGGGAGCTCCCGCGGAAAGGAGCGGCGGCGCGCTGA
GCGCGACCAACACCGTCGTCGGCGTCGTCGGCGTCACAATGGTCGTTCAC
GGGCGTCGCAGGAGGAGGGCGGTGATGTCGACGACCGAGAGAGGGGGCAC
GCGGATAGCCAAACGCGACGGCGGCATCTGCCCCAAGACTGGGACGAGGA
AGGGGAGCCCGTTCCAGGTAGCAGCGAGGAGGAAGAGAAGGAGGAGGAGG
AGGAGAGAGAAGATAGAGTCGCCGACCGAGATAGTAGTAGCAGCGGTAGC
AACAGCGACAGTGCGGGGGGGATTACCGCGCCGCAGCGAAGAAGACGAAT
CGGTCGGCGACTGGCCGTCAGCAGCAGCGGCAGCGACGAAGGGACAGCGG
ACGACGCCGGGGTTCCTTACCGTCGGAGGCTGGGGGATCGATCCGACATA
AGCGATGCCGGAAGCCAGTACGACGACGACCACGATCACGACGACTCCGA
TATCGACCTCCTGTATGTCCGGCAGGGTGTCCGCGGCCACGGCGGGACTC
TTCGCCCTCGTGATCGTCGTAGCCAACGAAGCCGCGGATGTGACAGCAGT
GGCGGAGGAGCCAGTGTTACCGAGCAAGAGTCGGGGCTAGAACAGGGCGA
GGAGGAGGGAGAGGGAGAGATGAGCGTCTCCTCTGAATCGGGCCGCAGCG
GTGGTGGTGAGGAGGGGGTCGTCGGGGGGGGGTTCCTGCAGGCGGAGGGG
GACGAGGACGAGCTCCCGCCGGACATTCAGGATCCCACGAGAGGGGTCAA
GGACCCCGGCGTGCTCCAGGCGAGGCTCGAGGAGTTGCTGAAGCAGATGG
AGACGGGCGACGTGACGAAGCTGGAGGAAGACGTTGCTGCGGCGTGCCGG
TGCGTGGAGTCGGCGACCGCGCCCGGCGCCAGCAGCACATCCGCCTTAGT
CTCCTCCCTCAGAGCCGACCTGCAGGACCTCTTGGACCGGCGTGACCAGG
ACCGCGGGGAGGGGGGGCGTCGAGGCAAGAAGCGTCCCCGACGGCGGGCA
TCTTCCGACGGCGGGAAGGAGAGGAGGAGGCGCGCCGCCGCTCGTCCTCG
CGCCGGGGCTATCGAAGAAGAAGGCGACGACGGGACCAGCACCCGTGGGG
AGAATGACCGTGGTGGAGGGTCGGGGTGGGGAAGAAGAGGAGGCGCGGCG
CTCAGACCGGCTCCACGGCTAAACGCTCTGGCAGGAGCGGTGGCGGCGGC
GGCGGCGCTGGTGCTCGCCGCTGTGGGTCTTCTTCTTCTTCTGTCAACCC
CCGGCATCACCGCCGACGGGGCGGCGAGAAGCACGGCGGCGGCGGCGGGG
GTGGACGTGGAGGTGGAGACCGGGGCGTGA
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