prot_Ecto-sp13_S_contig6836.17792.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6836.17792.1
Unique Nameprot_Ecto-sp13_S_contig6836.17792.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length960
Homology
BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Match: D8LL32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL32_ECTSI)

HSP 1 Score: 1068 bits (2761), Expect = 0.000e+0
Identity = 723/915 (79.02%), Postives = 745/915 (81.42%), Query Frame = 0
Query:    1 MAAVRCYLRDGDPLFIRSNLSKLEAGTLTHLAVGDTVRVARRCRGENKEGGQGIVLAALPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSRWGRSAXXXXXXXXXXXXXXXXXXXXMSSLPSYLRGGGGSPSGSPQSPPEIAVPRGGFRRDRERAHPLKRPRPTGSSQEAKEREKARPDPPRQRAGGGVPGVPPRACGGGGSVELKKAAVNERSSSLQSGEGGQGMDVEDDGIARREVSHGDTVGSEAVQGGAGESAXXXXXXXXXGREGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGSSDGEVPSQGPNAAANGTLRRGGVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-SQPSSNRDVWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCRQECEYFTSRSRAVQQGLYPLE-RSEEDEGLGGSSRGKERXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVDDRERGHADSQTRRRHLPQDWDEEGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAGGITAPQRRRRIGRRLAVXXXXXXXXXXXXXXXXXXXXXXXXSDISDAGSQYDDD-HDHDDSDIDLLYVRQGVRGHGGTLRPRDRRSQRSRGCDSSGGGASVTEQESGLEQGEEEGEGEMSVSSESGRSGGGEEGVVGGGFLQAEGDEDELPPDIQDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATAPGASSTSALVSSLRADLQDLLDRRDQDRGEGGRRGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSTRGENDRGGGSGWGRRGGAALRPAPRLNALAG 912
            MAAVRCYLRDGDPLFIRSNLSKLEAGTLT LAVGDTVRVARRCRGENKEGGQGIVLA LPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCG CNSFESECTCQAPSR GRSAXXXXXXXXXXXXXXXXXX  MSSLPSYLRGGGGSPS SPQSP EIAVP G FRR RERAHPLKRPRP GSSQEAKERE+ARPDPPR++AGGGVPGVPPR  G    VELKKAAV++RSSSLQSGEGGQGMDVEDDG+ RR+VSHGDT GS AV GGAGESA         G EGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGS D E+PS GP+A A GTLRRGGVV+               X              SQPSS+RDVWRP+KKELVEVARR APGMNKLGGTARVVKVDPATGLVDVR+VVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDC+QECEYFTSR RA QQGLY +E RSE              XXXXXXXXXXXXXXXX           GD+DDRERGHADSQTRRRHLPQDWDEEGEP     XXXXXXXXXXXXXXXXXXXXXXXXXXX              IGRRLAV                        SD S AGSQYDD  HDHD SDIDLLYV+ GVRGHGGTL PRDRRSQRSRG DSSGGGAS TEQ+SGLEQGEEEGEGEMSVSSESGRSGGG+EG VGG FLQAEGDEDELPPDI+DPTRGVKDPGVLQARLEELLKQME GDVTKLEEDVAAACRCVESATAPGA+ST+ALVSSLRADLQDLLDRRDQ  GEGGRRG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               GRRG AALRPAPRLNALAG
Sbjct:    1 MAAVRCYLRDGDPLFIRSNLSKLEAGTLTRLAVGDTVRVARRCRGENKEGGQGIVLAVLPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGTCNSFESECTCQAPSRGGRSAXXXXXXXXXXXXXXXXXXS-MSSLPSYLRGGGGSPSVSPQSPKEIAVPGGAFRRGRERAHPLKRPRPAGSSQEAKEREEARPDPPRKQAGGGVPGVPPRVWGXXXGVELKKAAVDDRSSSLQSGEGGQGMDVEDDGLPRRKVSHGDTFGSGAVPGGAGESATAAAAE---GTEGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGSHDREIPSHGPDAPAKGTLRRGGVVDSSNHDPVEGGVGGVGXGSDGNRRDPGEEEESQPSSSRDVWRPRKKELVEVARRMAPGMNKLGGTARVVKVDPATGLVDVRFVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCQQECEYFTSRPRATQQGLYLIEERSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGRSRASQEEGGDIDDRERGHADSQTRRRHLPQDWDEEGEPVPGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----IGRRLAVSSSGSDEGTADDAEVPNRRRLGDRSDGSYAGSQYDDHGHDHD-SDIDLLYVQPGVRGHGGTLHPRDRRSQRSRGRDSSGGGASDTEQDSGLEQGEEEGEGEMSVSSESGRSGGGDEGGVGGAFLQAEGDEDELPPDIRDPTRGVKDPGVLQARLEELLKQMEAGDVTKLEEDVAAACRCVESATAPGATSTAALVSSLRADLQDLLDRRDQFGGEGGRRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRGAAALRPAPRLNALAG 905          
BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Match: A0A6H5K8X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8X1_9PHAE)

HSP 1 Score: 1013 bits (2619), Expect = 0.000e+0
Identity = 678/838 (80.91%), Postives = 696/838 (83.05%), Query Frame = 0
Query:    1 MAAVRCYLRDGDPLFIRSNLSKLEAGTLTHLAVGDTVRVARRCRGENKEGGQGIVLAALPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSRWGRSAXXXXXXXXXXXXXXXXXXXXMSSLPSYLRGGGGSPSGSPQSPPEIAVPRGGFRRDRERAHPLKRPRPTGSSQEAKEREKARPDPPRQRAGGGVPGVPPRACGGGGSVELKKAAVNERSSSLQSGEGGQGMDVEDDGIARREVSHGDTVGSEAVQGGAGESAXXXXXXXXX--GREGDQTPPQLSKRYDKDSGGGDDDAEAIWTEHAQGSSDGEVPSQGPNAAANGTLRRGGVVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---QPSSNRDVWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCRQECEYFTSRSRAVQQGLYPLERSEEDEGLGGSSRGKERXXXXXXXXXXXXXXXXXXXXXXXXXXXGDVDDRERGHADSQTRRRHLPQDWDEEGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSAGGITAPQRRRRIGRRLAVXXXXXXXXXXXXXXXXXXXXXXXXSDISDAGSQYDDDHDHDDSDIDLLYVRQGVRGHGGTLRPRDRRSQRSRGCDSSGGGASVTEQESGLEQGEEEGEGEMSVSSESGRSGGGEEGVVGGGFLQAEGDEDELPPDIQDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATAPGASSTSALVSSLRADLQDLLDRRDQ 833
            MAAV+CYLRDGDPLFIRSNLSKLEAGTLT LAVGDTVRVARRCRGENKEGGQGIVLA LPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSR GRSAXXXXXXXXXXXXXXXXXX  MSSLPSYLRGGGGSPSGSPQS  E AVPR GFRR+RERAHPLKRPRP GSSQEAKERE ARPDPPR+RAGGGV GVPPR  G    VELKKAAV++ SSSLQSG+GGQGMDVEDD + RREVSHGDT GS AVQGGAGESA  XXXXXXX  GREGDQTPPQLSKR DKDSG      EAIWTEHAQGS  GE+PS GP+AAANGTL RGGVV+         XXXXXXXXXXXXXXXXXXXX    Q SS+RDVWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDC+QECEYFTSR RA QQGLY +ERSEED G GGSS GK  XXXXXXXXXXXXXXXXXX         GDVDDRERGHADSQTRRRHLPQDWDEEGEP   XXXXXXXXXXXXXXXXXXXXXXXXXX      GGITAPQ+RRRIG RLA+                        SD SDAGSQYD       SDIDLLYVR GVRGHGGTLRPRDRRSQRSRG DSS GG SVT+QESGLEQ                         VGG FLQAEGDEDELPPDI+DPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATAPGASST+ LVSSLRADLQDLLDRRDQ
Sbjct:    1 MAAVKCYLRDGDPLFIRSNLSKLEAGTLTRLAVGDTVRVARRCRGENKEGGQGIVLAVLPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGRCNSFESECTCQAPSRGGRSAXXXXXXXXXXXXXXXXXX--MSSLPSYLRGGGGSPSGSPQS--ETAVPRAGFRRERERAHPLKRPRPAGSSQEAKEREGARPDPPRKRAGGGVSGVPPRVWGXX-XVELKKAAVDDSSSSLQSGKGGQGMDVEDDRLPRREVSHGDTFGSGAVQGGAGESATAXXXXXXXAEGREGDQTPPQLSKRCDKDSGXXXXXDEAIWTEHAQGSHGGEIPSHGPDAAANGTLHRGGVVDSGNHDPADGXXXXXXXXXXXXXXXXXXXXXXXFQASSSRDVWRPQKKELVEVARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRATFGRCVHCGSLRVDCQQECEYFTSRPRATQQGLYLMERSEEDGGPGGSSLGKXXXXXXXXXXXXXXXXXXXXRSQASQEEGGDVDDRERGHADSQTRRRHLPQDWDEEGEPVPGXXXXXXXXXXXXXXXXXXXXXXXXXX-----VGGITAPQQRRRIGLRLALSSSDSDEGTADDAGVPNRRRLGDGSDGSDAGSQYDXXXXXXXSDIDLLYVRPGVRGHGGTLRPRDRRSQRSRGRDSSVGGGSVTDQESGLEQXXXXXXXXXXXXXXXXXXXXXXXXXVGGAFLQAEGDEDELPPDIRDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACRCVESATAPGASSTATLVSSLRADLQDLLDRRDQ 828          
BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Match: T0RV44_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RV44_SAPDV)

HSP 1 Score: 60.1 bits (144), Expect = 2.660e-5
Identity = 34/65 (52.31%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  397 ELVEVARRTAPGMNKLGGTARVVKV--DPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRA 459
            +LVEV  RT PG+NK+GG ARV+ V  D     VDVRY + GG E+ +D  YV+P+  DM++KRA
Sbjct:   73 DLVEVETRTWPGINKIGGAARVISVYSDGGDTFVDVRYFL-GGSEKRVDVAYVQPS--DMHQKRA 134          
BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Match: A0A067C220_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C220_SAPPC)

HSP 1 Score: 58.5 bits (140), Expect = 7.840e-5
Identity = 33/65 (50.77%), Postives = 45/65 (69.23%), Query Frame = 0
Query:  397 ELVEVARRTAPGMNKLGGTARVVKV--DPATGLVDVRYVVEGGWERNIDPVYVRPATLDMNEKRA 459
            +LVEV  RT PG+NK+GG ARV+ V  D     VDVRY + GG E+ +D  YV+P+  D+++KRA
Sbjct:   76 DLVEVETRTWPGINKIGGAARVISVYSDGGDTFVDVRYFL-GGSEKRVDVAYVQPS--DIHQKRA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6836.17792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LL32_ECTSI0.000e+079.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K8X1_9PHAE0.000e+080.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
T0RV44_SAPDV2.660e-552.31Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
A0A067C220_SAPPC7.840e-550.77Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 932..959
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 909..931
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..908
NoneNo IPR availableTMHMMTMhelixcoord: 909..931

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6836contigEcto-sp13_S_contig6836:1455..6422 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6836.17792.1mRNA_Ecto-sp13_S_contig6836.17792.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6836 1455..7496 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6836.17792.1 ID=prot_Ecto-sp13_S_contig6836.17792.1|Name=mRNA_Ecto-sp13_S_contig6836.17792.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=960bp
MAAVRCYLRDGDPLFIRSNLSKLEAGTLTHLAVGDTVRVARRCRGENKEG
GQGIVLAALPEYFYDVKYVGGVEYGVDACFVEKIKLGSTKRRGGTSRCGR
CNSFESECTCQAPSRWGRSAAAAAAAAAEEAALAAAKKASMSSLPSYLRG
GGGSPSGSPQSPPEIAVPRGGFRRDRERAHPLKRPRPTGSSQEAKEREKA
RPDPPRQRAGGGVPGVPPRACGGGGSVELKKAAVNERSSSLQSGEGGQGM
DVEDDGIARREVSHGDTVGSEAVQGGAGESAAAAAAAAAEGREGDQTPPQ
LSKRYDKDSGGGDDDAEAIWTEHAQGSSDGEVPSQGPNAAANGTLRRGGV
VESGNNDPADGGGGGGGGSDGNRRDPGEEEESQPSSNRDVWRPQKKELVE
VARRTAPGMNKLGGTARVVKVDPATGLVDVRYVVEGGWERNIDPVYVRPA
TLDMNEKRATFGRCVHCGSLRVDCRQECEYFTSRSRAVQQGLYPLERSEE
DEGLGGSSRGKERRRAERDQHRRRRRRRHNGRSRASQEEGGDVDDRERGH
ADSQTRRRHLPQDWDEEGEPVPGSSEEEEKEEEEEREDRVADRDSSSSGS
NSDSAGGITAPQRRRRIGRRLAVSSSGSDEGTADDAGVPYRRRLGDRSDI
SDAGSQYDDDHDHDDSDIDLLYVRQGVRGHGGTLRPRDRRSQRSRGCDSS
GGGASVTEQESGLEQGEEEGEGEMSVSSESGRSGGGEEGVVGGGFLQAEG
DEDELPPDIQDPTRGVKDPGVLQARLEELLKQMETGDVTKLEEDVAAACR
CVESATAPGASSTSALVSSLRADLQDLLDRRDQDRGEGGRRGKKRPRRRA
SSDGGKERRRRAAARPRAGAIEEEGDDGTSTRGENDRGGGSGWGRRGGAA
LRPAPRLNALAGAVAAAAALVLAAVGLLLLLSTPGITADGAARSTAAAAG
VDVEVETGA*
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