prot_Ecto-sp13_S_contig68.17737.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig68.17737.1
Unique Nameprot_Ecto-sp13_S_contig68.17737.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length247
Homology
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BLAST of mRNA_Ecto-sp13_S_contig68.17737.1 vs. uniprot
Match: A0A6H5KWL3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWL3_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 5.530e-51
Identity = 169/218 (77.52%), Postives = 172/218 (78.90%), Query Frame = 0 
Query:    1 MEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVS----SSAEGTVIVQVEPAGSVDSAPSSVVGEPTTTXXXXXXXXXXAGPTTEARPGLAAVAXXXXXXXXXXXXXXXXXXXXXXXX-RPMLATDRSESXXXXXXXXXXXXXXXXXXXXXXXXPRPPALVASGSGSMSYSMGSSGHPTSTRSSTTSSPGSNLIGVSLVGSAPSTDSILEPSPESSPRR 213
            MEEGSPRGAQAAFSDAGTSSQVAEGSQV         SSAEGTVIVQVEPA SVDSAPSSVVG     XXXXXXXXX AG TTEAR G     XXXXXXXXXXXXXXXX         RPMLATDRSES         XXXXXXXXXXXXX  PRPPAL+ASGSGSMSYSMGSSGHPTSTRSSTTSSPGSNLIGVSL+ + PS DSILEPSPESSPRR
Sbjct: 1139 MEEGSPRGAQAAFSDAGTSSQVAEGSQVXXXXXXXXXSSAEGTVIVQVEPAASVDSAPSSVVGXXXXXXXXXXXXXXIAGLTTEARLGXXXXXXXXXXXXXXXXXXXXXSSNARARQNRPMLATDRSESSGSEQSAPSXXXXXXXXXXXXXTIPRPPALLASGSGSMSYSMGSSGHPTSTRSSTTSSPGSNLIGVSLISNTPSADSILEPSPESSPRR 1356
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BLAST of mRNA_Ecto-sp13_S_contig68.17737.1 vs. uniprot
Match: D8LBV2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV2_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 4.840e-20
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0 
Query:    1 MEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVSSSAEGTVIVQVEPAGSVDSAPSSVVGE 60
            MEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVSSSAEGTVIVQVEPA SVDSAPSSVV E
Sbjct: 1152 MEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVSSSAEGTVIVQVEPAESVDSAPSSVVAE 1211
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig68.17737.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KWL3_9PHAE5.530e-5177.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LBV2_ECTSI4.840e-2096.67Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig68contigEcto-sp13_S_contig68:22968..23934 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig68.17737.1mRNA_Ecto-sp13_S_contig68.17737.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig68 22968..23960 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig68.17737.1 ID=prot_Ecto-sp13_S_contig68.17737.1|Name=mRNA_Ecto-sp13_S_contig68.17737.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=247bp
MEEGSPRGAQAAFSDAGTSSQVAEGSQVGSQVSSSAEGTVIVQVEPAGSV
DSAPSSVVGEPTTTSSASESTTTTAGPTTEARPGLAAVAAAAGAGAGAAT
ATVFSSNARARQNRPMLATDRSESSGSEQSAPSPGGPLQQQQQQQQTIPR
PPALVASGSGSMSYSMGSSGHPTSTRSSTTSSPGSNLIGVSLVGSAPSTD
SILEPSPESSPRRRRTSPTPPLPPVKEASQEYASSSGTAAAGAVAAT
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