mRNA_Ecto-sp13_S_contig6799.17731.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6799.17731.1
Unique NamemRNA_Ecto-sp13_S_contig6799.17731.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6799.17731.1 vs. uniprot
Match: A0A6H5JZX1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZX1_9PHAE)

HSP 1 Score: 809 bits (2090), Expect = 3.210e-267
Identity = 449/631 (71.16%), Postives = 490/631 (77.65%), Query Frame = 1
Query:    1 EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWYLKLRVPVAIDLPRRRSGASYWYDEHVRAKTEQYFSGRRSSGKGWPMENDLPLRRPRYSFYSRTSSASMDTSGAMAQTLSMDTHRSCGRQNQAGATEDDLPRRRFFFPSMTGSVDDAIDEQAIQEYGVDTEAISEVQDRSHGRGRTPGRPTEEDLPRRRPSFSFASGVSVDRADNLHVVRSTPEHEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRIDDPDLQSVPEHEHGLQYTVDEINDRRDGERRRAGPIEDDLPHRRSGFCPTFGSASHDPDHPGEQAKH-----------ERGKRSNLTQRWGXXXXXXXXXXXXXFSSASTASVDGSSEPEKEAVSTCEDGLESVADEDGGRRWGRVRGGPAEDNLPRRRPVVSSMSDSSTDSKRHGLRQWXXXXXXXXXXXXXXXXXXXTTSICSISDTGLPSAPDRGDGVMFDADEDGLHHGGGGKWFGPVEDGLPQRRSSLSFASTTSVSNSHDSGPQPAPELGKSATSAVSEDGLKNGRGRKWGGPAEDDLPRRRPWFSSTSTSSLSSINNTGLPSASDCRNGGMSGVDENGLKHGRGNK 1860
            EREFI RRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEW  KL VPVAIDLPRRRSGASYWY+EHV AKTEQ+ SGRRSSG+GWPMENDLPLRR RYSF SRTSSASMDTSG MA+++  D HRS GRQNQ  ATEDDLPRRRFF PS++GSVD+AID+QAIQ++GVDT AISEVQDR+HGRGRTPG PTEEDLPRRRP F+ A GV V+RADNLHVVRS PEH +                             G IDD  L SVPEH+HGL+  VDEI+ RR  ERRRAGPIEDDLPHRRSG   T G+ASHDPDHPG QAKH           ERG R ++TQRWG             FSSASTASVDGSSE +KE+VSTCE+ L SV DE+  R WGRVR GPAEDNLP RR V  SM DS+ DS+ HGLR+W  XXXXXXXXXXXXXXX  T S  SI+D GLPS  D GDG + DADEDGL H  G KW GP+EDGLPQRRS  SFAST SV N++++GPQPAPELG SATSAV EDGLKNGR  KWGG A+DDLPRRRPWF STSTSS SSI++TG PSASD  NGG SGVDE+GLKHGRGN+
Sbjct:  644 EREFIIRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWNFKLHVPVAIDLPRRRSGASYWYEEHVDAKTEQFSSGRRSSGEGWPMENDLPLRRSRYSFNSRTSSASMDTSGEMAKSVKKDEHRSYGRQNQGDATEDDLPRRRFFHPSISGSVDNAIDKQAIQDHGVDTGAISEVQDRNHGRGRTPGGPTEEDLPRRRPGFALAPGVLVNRADNLHVVRSAPEHGECQTRKRGGLMEDSLPRRRSCLFSELGSSEGSIDDHGLPSVPEHDHGLEDAVDEIDARRGWERRRAGPIEDDLPHRRSGSSSTSGAASHDPDHPGVQAKHDYSKNTRPTGDERGDRRSVTQRWGEPVEDSLPRRRSVFSSASTASVDGSSERQKESVSTCENDLGSVVDENSRRGWGRVRRGPAEDNLPHRRSVFPSMWDSAKDSRGHGLRKWGEXXXXXXXXXXXXXXXASTASSGSINDAGLPSRTDHGDGALLDADEDGLQHCRGRKWCGPIEDGLPQRRSISSFASTASVGNNNNTGPQPAPELGNSATSAVCEDGLKNGRRPKWGGLAQDDLPRRRPWFFSTSTSSTSSISDTGQPSASDNGNGGTSGVDESGLKHGRGNE 1274          
BLAST of mRNA_Ecto-sp13_S_contig6799.17731.1 vs. uniprot
Match: A0A6H5KD37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD37_9PHAE)

HSP 1 Score: 705 bits (1820), Expect = 4.030e-232
Identity = 380/565 (67.26%), Postives = 414/565 (73.27%), Query Frame = 1
Query:    1 EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWYLKLRVPVAIDLPRRRSGASYWYDEHVRAKTEQYFSGRRSSGKGWPMENDLPLRRPRYSFYSRTSSASMDTSGAMAQTLSMDTHRSCGRQNQAGATEDDLPRRRFFFPSMTGSVDDAIDEQAIQEYGVDTEAISEVQDRSHGRGRTPGRPTEEDLPRRRPSFSFASGVSVDRADNLHVVRSTPEHEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRIDDPDLQSVPEHEHGLQYTVDEINDRRDGERRRAGPIEDDLPHRRSGFCPTFGSASHDPDHPGEQAKHE-----------RGKRSNLTQRWGXXXXXXXXXXXXXFSSASTASVDGSSEPEKEAVSTCEDGLESVADEDGGRRWGRVRGGPAEDNLPRRRPVVSSMSDSSTDSKRHGLRQWXXXXXXXXXXXXXXXXXXXTTSICSISDTGLPSAPDRGDGVMFDADEDGLHHGGGGKWFGPVEDGLPQRRSSLSFASTTSVSNSHDSGPQPAPELGKSATSAVSEDG 1662
            EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGP+PE Y KLRVPVAIDLPRRRSGASYWY+EHV A TEQ   GRRSSG+G PMENDLPLRRPRYSF+SRTSS SM TSG MA+ + MD HRS GRQNQAGAT+DDLPRRRFF PSM GSVD+ I EQA+Q+YG+DT AISEVQDR+HGRGRTPG PTEEDLPRRRP +  A GV VDRADNLHVVRS PEHE+S                            GRIDD  L SV EH+HGL+Y VDEI+ RRD ERRRAGPIEDDLPHRRSGF  T G+ASHDPDHPG Q KH+           RG R ++TQRWG             FSSASTASVDGS++ +KE+V  CE+  E V DE+  R WGRVR GPAEDNLP RRPV  SMSD + DS+ HGLR+W                   T SICSISDTGLPS  D  DGV+ DAD+DGL H  G K  GP+EDGLPQRRS  S AST SV NS  +GPQP PELG SATSAV EDG
Sbjct:  813 EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPHPELYFKLRVPVAIDLPRRRSGASYWYEEHVDANTEQCSPGRRSSGQGLPMENDLPLRRPRYSFHSRTSSPSMYTSGEMAKPMKMDEHRSYGRQNQAGATKDDLPRRRFFSPSMLGSVDNVIAEQAMQDYGIDTGAISEVQDRNHGRGRTPGGPTEEDLPRRRPGYLLAPGVLVDRADNLHVVRSAPEHEESRTQKRGGLMDDSLPRRRSCLFSDLGSSKGRIDDHGLLSVLEHDHGLEYAVDEIDARRDWERRRAGPIEDDLPHRRSGFSSTPGAASHDPDHPGVQTKHDYSKNTRPTGDKRGDRRSVTQRWGEPVEDSVPRRRSDFSSASTASVDGSNKRQKESVLMCENYQEPVVDEESRRGWGRVRAGPAEDNLPHRRPVFPSMSDYAKDSRGHGLRKWGEPVENDLPRRRSWFSSASTASICSISDTGLPSRTDHRDGVLLDADDDGLQHCRGRKRCGPIEDGLPQRRSIFSIASTESVGNSSSTGPQPTPELGNSATSAVCEDG 1377          
BLAST of mRNA_Ecto-sp13_S_contig6799.17731.1 vs. uniprot
Match: A0A6H5KBY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY1_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 6.150e-112
Identity = 188/227 (82.82%), Postives = 200/227 (88.11%), Query Frame = 1
Query:    1 EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWYLKLRVPVAIDLPRRRSGASYWYDEHVRAKTEQYFSGRRSSGKGWPMENDLPLRRPRYSFYSRTSSASMDTSGAMAQTLSMDTHRSCGRQNQAGATEDDLPRRRFFFPSMTGSVDDAIDEQAIQEYGVDTEAISEVQDRSHGRGRTPGRPTEEDLPRRRPSFSFASGV 681
            EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPE Y KLRVPVAIDLPRRRSGASYW++EHV A TEQ   GRRSSG+GWPMENDLPLRRPRYSF+SRTSS SMDTSG  A+ + MD HRS GRQNQAGAT+DDLPRRRFF PSM GSVD  I EQA+Q+YG+DT AI EV DR+HGRGRTPG PTEEDLPRRRP +  A GV
Sbjct:  672 EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPESYFKLRVPVAIDLPRRRSGASYWHEEHVDANTEQCSPGRRSSGQGWPMENDLPLRRPRYSFHSRTSSPSMDTSGETAKPMKMDEHRSYGRQNQAGATKDDLPRRRFFSPSMLGSVDIVIAEQAMQDYGIDTGAILEVHDRNHGRGRTPGGPTEEDLPRRRPGYVLAPGV 898          
BLAST of mRNA_Ecto-sp13_S_contig6799.17731.1 vs. uniprot
Match: A0A6H5JTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ3_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 6.940e-73
Identity = 236/673 (35.07%), Postives = 293/673 (43.54%), Query Frame = 1
Query:    1 EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWYLK-LRVPVAIDLPRRRSGASYWY---DEHVRAKTEQYFSGRRSSGKGWPMENDLPLRRPRYSFYSRTSSASMDTSG-----------------------------------------------------------AMAQTLSMDT-HRSCGRQNQAGATEDDLPRRRFFFPSMTGSVDDAIDEQAIQEYGVDTEAISEVQDRSHGRGRTPGRPTEEDLPRRRPSFSFASGVSVDRADNLHVVRSTPEHEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRI-------------DDPDLQSVPEHEHGLQYTVDEINDRRDGERRRAGPIEDDLPHRRSGFCPTFGSASHDPDHPGEQAKH-----------ERGKRSNLTQRWGXXXXXXXXXXXXXFSSASTASVDGSSEPEKEAVSTCEDGLESVADEDGGRRWGRV-RGGPAEDNLPRRRPVVSSMSDSSTDSKRHGLRQWXXXXXXXXXXXXXXXXXXXTTSICSISDTGLPSAPDRGDG-----VMFDADEDGLHHGGGGKWFGPVEDGLPQRRSSLSFASTTSVSNSHDSGPQPAPELGKSATSAVSEDGLKNGRGRKWGGPAEDDLPRRRPWFS 1737
            EREFI RRTLRLW  TWF MVG+N+FACVRDTREGIRDPTGSR Q RLRAG+IGPYPEW LK LR PV IDLPRR  G   WY   D+   A T+Q  SGRR   K  P END P+RR  YS  S  ++ SM+ +G                                                           + AQ++S    H S GRQ  AG  EDDLPRRR    +    +DDA+ EQ I E     EA  +VQ     RGR  G P  ED PRRRPS    SG SVD  DN  + +S PEH+                               R              D+ D Q +PE+ + L+  VD+ +    G R +   +EDDLPHRRSG+    G A H  +     A H           ++  RS+ T +WG             F SASTAS+D      ++AV   +DGL+   DE   +R G    GGP +++L  RRP  S  S +S +                                   +  GL + P+ G       V      +    GG      P EDGLP+RRS     S TSV ++ +   Q   E      S+    G + G GR   G  EDD+PRRR WFS
Sbjct:  594 EREFINRRTLRLWGRTWFNMVGSNVFACVRDTREGIRDPTGSRRQDRLRAGQIGPYPEWSLKNLRAPVPIDLPRRNFGGFDWYGGQDDDADAITDQPASGRRRKWKRGPAENDYPIRRSSYSLDSTIAAVSMEEAGQTSSPRSAGISGSDERSGSNENGPIEDNLSFRHSNILVPSAVVVDRRGDAGPLTGREYVSHAQSISAKRRHGSHGRQCGAGLIEDDLPRRRIGLAAGPEILDDAVHEQGIDENEAGLEADEDVQGPRRRRGRRRGEPAGEDFPRRRPSVWSVSGFSVDHVDNTDL-QSVPEHDNDLEHFSDVHGPQNGQSRTRRGPVEDSLPRRRFCSSSIPMSSLDSSDEADRQPLPEYGNDLEAVVDDGSLHGWGHR-QGRHLEDDLPHRRSGYSAASGFARHLDEDLSLPAMHNLDTNMWPASVQQSARSDRTHKWGEPVQDDLPRRRSVFCSASTASMDSIHGSSRQAVP--KDGLKFDVDETPPQRRGSCPHGGPVQNDLSSRRPSFSFRSTTSAEDPP--------------------------------AIDGLQAVPEHGGDAPPLVVNRSWQRERATRGG------PFEDGLPRRRSVFLSTSMTSVDSADEPFLQSVLENRNYRGSSGGWAGRQRGEGRAQEGLVEDDVPRRRSWFS 1224          
BLAST of mRNA_Ecto-sp13_S_contig6799.17731.1 vs. uniprot
Match: D7G5L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L6_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 4.710e-40
Identity = 148/440 (33.64%), Postives = 195/440 (44.32%), Query Frame = 1
Query:   58 MVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWYL-KLRVPVAIDLPRRRSGASYWY---DEHVRAKTEQYFSGRRSSGKGWPMENDLPLRRPRYSFYSRTSSASMDTSGAMAQTLSMDTHRSCGRQ---NQAGATEDDL--PRRRFFFPSMTGSVDDAIDEQAI--QEYGVDTEAIS-EVQDRSHGRGRTPGRPTEEDLPRRRPSFSFASGVSVDRADNLHVVRSTPEHEKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----------RIDDPDLQSVPEHEHGLQYTVDEINDRRDGERRRAGPIEDDLPHRRSGFCPTFGSASHDPDHPGEQAKHERGKRSNLTQRWGXXXXXXXXXXXXXFSSASTASVDGSS-EPEKEAVSTCEDGLESVADEDGGRR-WGRVRGGPAEDNLPRRRPVVSSMSDS 1305
            MVG+NLFACVRDTREGIRDPTGSR QAR RAG +GPYP W L ++R PV IDLPRR SG   WY   D+   A T+Q  S RR   K  P E+  P+R   YS  S   + SM+ +G  +   S DT  S   +   N++G  ED L  P      PS    VD   D   +  +E     +++S + +  SHGR    G   E+DLPRRR   + A  +  D      +     + E                                          +++ D+QS+PEH++ L+Y  +    R    R R GP+ED LP RR  FC                                              SS    SVD SS E +++ +    + LE+V +EDG +  WG  RGG  ED+LPRRR   S+ S S
Sbjct:    1 MVGSNLFACVRDTREGIRDPTGSRHQARSRAGPVGPYPVWSLSRIRAPVPIDLPRRNSGGFDWYGGQDDDANAITDQRASDRRWRWKRGPTESAHPVRPSSYSLDSTIVAVSMEKAGQTSSLRSADTFGSDDERSGSNESGPIEDSLSFPHSSILIPSAVVVVDRQGDAGPLTARECASHFQSVSLKRRHGSHGRQNGAGL-IEDDLPRRRIGLAAAPKILDDAVHKQVIDEKEADLESDEDVQGGPRRRRGRRPGEPTEEDFPLRRSSVWSVSGFSVDHVNNTDVQSMPEHDNDLEYFSNAHGPRNRQSRARQGPVEDSLPRRR--FCS---------------------------------------------SSIPMTSVDNSSIEADRQPLPQHGNDLEAVVEEDGSQHGWGHRRGGLLEDDLPRRRSGYSATSTS 392          
BLAST of mRNA_Ecto-sp13_S_contig6799.17731.1 vs. uniprot
Match: A0A6H5J9C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.970e-14
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 1
Query:    1 EREFITRRTLRLWAPTWFRMVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWYLKLRV 195
            ERE   R TLRLW   WFRMV +N+FAC+RDTREGIR PT S  Q RLR GRIGP+P+W LK R 
Sbjct:  639 EREVTKRLTLRLWGRAWFRMVFSNMFACLRDTREGIRGPTHSARQGRLRTGRIGPFPDW-LKRRT 702          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6799.17731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JZX1_9PHAE3.210e-26771.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD37_9PHAE4.030e-23267.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBY1_9PHAE6.150e-11282.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTJ3_9PHAE6.940e-7335.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G5L6_ECTSI4.710e-4033.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9C2_9PHAE2.970e-1466.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6799contigEcto-sp13_S_contig6799:977..4130 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2871
Hectar predicted targeting categoryother localisation
Exons3
Cds size1806
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463933.9393096-UTR-Ecto-sp13_S_contig6799:976..19841681463933.9393096-UTR-Ecto-sp13_S_contig6799:976..1984Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6799 977..1984 -
1681463933.9859166-UTR-Ecto-sp13_S_contig6799:4073..41301681463933.9859166-UTR-Ecto-sp13_S_contig6799:4073..4130Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6799 4074..4130 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463933.9518971-CDS-Ecto-sp13_S_contig6799:1984..19851681463933.9518971-CDS-Ecto-sp13_S_contig6799:1984..1985Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6799 1985..1985 -
1681463933.963037-CDS-Ecto-sp13_S_contig6799:2002..37821681463933.963037-CDS-Ecto-sp13_S_contig6799:2002..3782Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6799 2003..3782 -
1681463933.9743314-CDS-Ecto-sp13_S_contig6799:4048..40731681463933.9743314-CDS-Ecto-sp13_S_contig6799:4048..4073Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6799 4049..4073 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6799.17731.1prot_Ecto-sp13_S_contig6799.17731.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6799 1985..4073 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6799.17731.1

>prot_Ecto-sp13_S_contig6799.17731.1 ID=prot_Ecto-sp13_S_contig6799.17731.1|Name=mRNA_Ecto-sp13_S_contig6799.17731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=602bp
MVGNNLFACVRDTREGIRDPTGSRLQARLRAGRIGPYPEWYLKLRVPVAI
DLPRRRSGASYWYDEHVRAKTEQYFSGRRSSGKGWPMENDLPLRRPRYSF
YSRTSSASMDTSGAMAQTLSMDTHRSCGRQNQAGATEDDLPRRRFFFPSM
TGSVDDAIDEQAIQEYGVDTEAISEVQDRSHGRGRTPGRPTEEDLPRRRP
SFSFASGVSVDRADNLHVVRSTPEHEKSRTRTSGGPMEDGLPRRRSCLFS
ALGSSKGRIDDPDLQSVPEHEHGLQYTVDEINDRRDGERRRAGPIEDDLP
HRRSGFCPTFGSASHDPDHPGEQAKHERGKRSNLTQRWGEPVEDGLPRRR
SCFSSASTASVDGSSEPEKEAVSTCEDGLESVADEDGGRRWGRVRGGPAE
DNLPRRRPVVSSMSDSSTDSKRHGLRQWGEPVEHDLPQRRSWFSSASTTS
ICSISDTGLPSAPDRGDGVMFDADEDGLHHGGGGKWFGPVEDGLPQRRSS
LSFASTTSVSNSHDSGPQPAPELGKSATSAVSEDGLKNGRGRKWGGPAED
DLPRRRPWFSSTSTSSLSSINNTGLPSASDCRNGGMSGVDENGLKHGRGN
K*
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mRNA from alignment at Ecto-sp13_S_contig6799:977..4130-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6799.17731.1 ID=mRNA_Ecto-sp13_S_contig6799.17731.1|Name=mRNA_Ecto-sp13_S_contig6799.17731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3154bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6799:977..4130- (Ectocarpus species13 EcNAP12_S_4_19m)
GAGCGGGAGTTCATCACCCGTCGCACTCTCCGGCTGTGGGCACCCACATG GTTCAGGATGGTCGGCAACAACCTGTTCGCATGTAAGTTCCTGTTGCGAT ATACTTTTGGAAGCGGAAAAGCGCGACCGCGGAAGGGCTTGACCACGAGT CTGAGGGGCAATCCACAAAGGCCTTCCAAATACAGAAGTAAGCAGACCAT TTCATGTAGTAAAACAACATAGATGGCCACAATATCGATCAATGTTGGGA CTCGTGGGTGTGAGACGTCAGTCCGGCTGTTCAAGCGTGTCAACGAAAAA CGAGTACTACAGTGATGCCCAATGGAATTCCACCCTCCTCTAACGCAGGT GTGAGGGATACGAGAGAGGGTATCCGTGACCCGACAGGCTCCAGGCTCCA AGCGCGTCTGCGAGCCGGGCGAATCGGCCCTTATCCTGAGTGGTACTTGA AACTACGGGTACCGGTCGCTATCGACCTGCCACGTCGCCGTTCTGGTGCT TCATATTGGTACGACGAGCACGTGCGTGCCAAAACTGAGCAATACTTCTC TGGAAGACGTTCGAGCGGTAAAGGATGGCCCATGGAGAATGATCTACCTC TCCGTCGTCCGCGATATTCTTTTTATTCGCGTACCTCTTCCGCAAGCATG GATACATCCGGCGCAATGGCTCAGACCCTGAGTATGGACACGCACCGAAG CTGTGGAAGGCAGAACCAAGCAGGTGCTACCGAGGACGATCTGCCCCGCC GCCGTTTCTTTTTCCCCTCGATGACGGGAAGTGTGGATGATGCCATCGAC GAACAGGCGATCCAGGAATATGGTGTTGACACGGAAGCTATCTCAGAGGT GCAAGATCGAAGTCACGGTCGGGGTCGCACACCCGGAAGACCGACAGAGG AAGATTTGCCGCGTCGTCGCCCGAGCTTTTCGTTTGCTTCAGGGGTTTCG GTCGACCGGGCCGACAACCTCCACGTTGTCCGGTCTACTCCGGAGCATGA GAAAAGTCGAACACGAACAAGTGGAGGGCCAATGGAGGACGGCTTACCCC GGCGTCGTTCCTGTCTGTTCTCTGCCTTGGGAAGTTCGAAAGGGCGCATC GACGATCCTGACCTGCAGTCAGTGCCGGAACACGAACATGGTCTGCAGTA TACTGTCGATGAGATCAATGATCGACGTGATGGGGAGCGTCGACGGGCAG GACCCATCGAAGACGATCTGCCACACCGCCGCTCCGGTTTCTGCCCGACT TTTGGTTCCGCGTCACATGACCCCGACCACCCTGGTGAGCAGGCTAAGCA CGAACGAGGTAAAAGAAGTAATCTCACTCAGAGATGGGGCGAACCCGTCG AAGATGGCCTGCCCCGTCGTCGATCGTGTTTCTCTTCCGCTTCAACGGCT TCGGTGGACGGCAGCAGTGAACCCGAAAAGGAGGCCGTGTCGACGTGTGA GGATGGCCTGGAATCTGTGGCCGATGAAGACGGTGGGCGTCGTTGGGGTC GTGTGCGAGGAGGACCCGCCGAGGACAACTTGCCCCGCCGCCGCCCGGTT GTCTCTTCCATGTCGGATTCGTCGACGGATTCCAAACGGCATGGACTGCG ACAATGGGGAGAACCCGTTGAGCACGACTTGCCCCAGCGTAGGTCGTGGT TCTCTTCTGCTTCAACGACATCGATATGCAGCATCAGCGACACCGGACTA CCGTCAGCACCGGACCGCGGAGACGGTGTTATGTTTGATGCCGACGAGGA CGGCCTTCATCATGGTGGAGGAGGAAAATGGTTTGGACCGGTTGAAGACG GCCTACCCCAGCGCCGCTCTAGTCTCTCTTTTGCGTCGACGACGTCGGTG AGCAATAGCCATGACAGTGGCCCGCAGCCAGCACCGGAGCTTGGAAAGAG TGCAACGTCTGCTGTAAGCGAGGACGGTCTGAAAAATGGTCGAGGACGAA AATGGGGAGGGCCCGCCGAGGACGACTTGCCCCGGCGTCGACCGTGGTTC TCTTCCACTTCGACGTCATCGCTGAGCAGCATCAACAACACCGGATTACC TTCAGCGTCGGACTGTCGAAACGGCGGGATGTCTGGTGTCGACGAAAACG GACTTAAGCATGGTCGAGGAAACAAATGGTGGGAACCCGTCGAAGACGAC CTGCCTCGGCGTCCCCCAATCTTTTCTTCTGGGTGGACGGTATCGATGAG CGACAGGAATAGCATAGGCCCGCAGCCGTCGCTCGAGAATGGGAATGGTG CAACGTCTACTGTCGCTGAGGACGGCCTCCGGCATAGTCGCGGCCAAAAA TCGGGACGGCCCGTTGAACACGACTTGCCCCAGCGTCGATCGTGGTTCTC TTCTACTCCCACGGCATCGATAAGCAGCACCAGTGATACTGGCTTTCAGT CACCGCAGTCACCGCAGGGCCATCGGAATGGGGTGGCTCGTAGCGTCGAT AAGGACGACGGTCGAAAGCATGGTCGAGGGCGAAAATGGCGGGAACCTGC TGAAGGCGGTCTCCCCCGGCGTCGATCGAGTTCGACGTCTACGGTAGGGT ATGCGGTAGGTTTTCCCGACGAGTCTGGCCTGGAGATAGCACCGGAGCAT GACAGCGGCCTTTCGTCTGTGGTCGATGAGAGCGATTGGCGGCATGCTCA AGGTCAACAATGGAGAGGGCCTTTCGAGGATGAACTGCCTCGGCGTCGCT GCATCAGCTCGTCCAAAACGGAGCATTTGACCAATGTCATTTCTGCGTCT GACCGACAAGTAAGTTGTGGTCACGGTGACGATGGCTTTGGGTCGGTCTT CAGTGACGACGGCTCCCCAAGCGGTTTGGGAGGTCGACGCCTAGGAGCGG TTCCAGACAAGTTCCCGCACCGTCGGCAAAACTTCGGCTCTGTTACAAGT TTTCTGGCCGACACATTCGATGAATCAGTCCCGCCAGAAAAGTACGATCA CGGCGCTACCCCACGCGCCTCTTCCGACGAGGACGGGCAAGGGCATACTC GTACTGGTGTCGATCTTTCCAAGCATCGGCGTCATGTTTGGTGGTCGGAC ATGATGGAGGGGGGATCTCTCGAGCTTTGGAGTGAAACATTACCTGTCGA GGCGGATCTCCTTTGGGAAACCGGGAGGAGTCCGTCTTCTAGGACAGGAG ACCA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6799:977..4130-

>mRNA_Ecto-sp13_S_contig6799.17731.1 ID=mRNA_Ecto-sp13_S_contig6799.17731.1|Name=mRNA_Ecto-sp13_S_contig6799.17731.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1806bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6799:977..4130- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGTCGGCAACAACCTGTTCGCATGTGTGAGGGATACGAGAGAGGGTAT
CCGTGACCCGACAGGCTCCAGGCTCCAAGCGCGTCTGCGAGCCGGGCGAA
TCGGCCCTTATCCTGAGTGGTACTTGAAACTACGGGTACCGGTCGCTATC
GACCTGCCACGTCGCCGTTCTGGTGCTTCATATTGGTACGACGAGCACGT
GCGTGCCAAAACTGAGCAATACTTCTCTGGAAGACGTTCGAGCGGTAAAG
GATGGCCCATGGAGAATGATCTACCTCTCCGTCGTCCGCGATATTCTTTT
TATTCGCGTACCTCTTCCGCAAGCATGGATACATCCGGCGCAATGGCTCA
GACCCTGAGTATGGACACGCACCGAAGCTGTGGAAGGCAGAACCAAGCAG
GTGCTACCGAGGACGATCTGCCCCGCCGCCGTTTCTTTTTCCCCTCGATG
ACGGGAAGTGTGGATGATGCCATCGACGAACAGGCGATCCAGGAATATGG
TGTTGACACGGAAGCTATCTCAGAGGTGCAAGATCGAAGTCACGGTCGGG
GTCGCACACCCGGAAGACCGACAGAGGAAGATTTGCCGCGTCGTCGCCCG
AGCTTTTCGTTTGCTTCAGGGGTTTCGGTCGACCGGGCCGACAACCTCCA
CGTTGTCCGGTCTACTCCGGAGCATGAGAAAAGTCGAACACGAACAAGTG
GAGGGCCAATGGAGGACGGCTTACCCCGGCGTCGTTCCTGTCTGTTCTCT
GCCTTGGGAAGTTCGAAAGGGCGCATCGACGATCCTGACCTGCAGTCAGT
GCCGGAACACGAACATGGTCTGCAGTATACTGTCGATGAGATCAATGATC
GACGTGATGGGGAGCGTCGACGGGCAGGACCCATCGAAGACGATCTGCCA
CACCGCCGCTCCGGTTTCTGCCCGACTTTTGGTTCCGCGTCACATGACCC
CGACCACCCTGGTGAGCAGGCTAAGCACGAACGAGGTAAAAGAAGTAATC
TCACTCAGAGATGGGGCGAACCCGTCGAAGATGGCCTGCCCCGTCGTCGA
TCGTGTTTCTCTTCCGCTTCAACGGCTTCGGTGGACGGCAGCAGTGAACC
CGAAAAGGAGGCCGTGTCGACGTGTGAGGATGGCCTGGAATCTGTGGCCG
ATGAAGACGGTGGGCGTCGTTGGGGTCGTGTGCGAGGAGGACCCGCCGAG
GACAACTTGCCCCGCCGCCGCCCGGTTGTCTCTTCCATGTCGGATTCGTC
GACGGATTCCAAACGGCATGGACTGCGACAATGGGGAGAACCCGTTGAGC
ACGACTTGCCCCAGCGTAGGTCGTGGTTCTCTTCTGCTTCAACGACATCG
ATATGCAGCATCAGCGACACCGGACTACCGTCAGCACCGGACCGCGGAGA
CGGTGTTATGTTTGATGCCGACGAGGACGGCCTTCATCATGGTGGAGGAG
GAAAATGGTTTGGACCGGTTGAAGACGGCCTACCCCAGCGCCGCTCTAGT
CTCTCTTTTGCGTCGACGACGTCGGTGAGCAATAGCCATGACAGTGGCCC
GCAGCCAGCACCGGAGCTTGGAAAGAGTGCAACGTCTGCTGTAAGCGAGG
ACGGTCTGAAAAATGGTCGAGGACGAAAATGGGGAGGGCCCGCCGAGGAC
GACTTGCCCCGGCGTCGACCGTGGTTCTCTTCCACTTCGACGTCATCGCT
GAGCAGCATCAACAACACCGGATTACCTTCAGCGTCGGACTGTCGAAACG
GCGGGATGTCTGGTGTCGACGAAAACGGACTTAAGCATGGTCGAGGAAAC
AAATGA
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