mRNA_Ecto-sp13_S_contig67837.17711.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: A0A6H5K1R5_9PHAE (PNPLA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1R5_9PHAE) HSP 1 Score: 102 bits (253), Expect = 6.610e-25 Identity = 49/50 (98.00%), Postives = 50/50 (100.00%), Query Frame = 1
Query: 16 MASGTLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
MASGTLREWLG+GPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS
Sbjct: 1 MASGTLREWLGKGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 50
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: A0A4Q6EC83_9PROT (Patatin (Fragment) n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6EC83_9PROT) HSP 1 Score: 67.8 bits (164), Expect = 2.430e-13 Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = 1
Query: 22 SGTLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
SG LR+WLGEGPF+LALSSS+ G + H G+ AL E+GL PAKVSG+S
Sbjct: 9 SGHLRDWLGEGPFTLALSSSFFGFYAHCGIAAALFEAGLVPAKVSGAS 56
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: A0A813I6K8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813I6K8_POLGL) HSP 1 Score: 59.3 bits (142), Expect = 6.280e-9 Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 1
Query: 4 SKTGMASGTLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
S++ A TL+EWL EGPF+L LSSS+ G + HAG++ AL+E+G+ P+ V+GSS
Sbjct: 29 SESTSAERTLQEWLLEGPFTLVLSSSFFGFYAHAGLLTALLEAGVVPSAVAGSS 82
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: A0A7S3XKZ4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKZ4_HETAK) HSP 1 Score: 58.2 bits (139), Expect = 1.640e-8 Identity = 26/46 (56.52%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 28 TLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
TLR+WL E PF+L LSSS+ G + H G++ AL+E GL P+K++GSS
Sbjct: 15 TLRQWLSEKPFTLTLSSSFFGFYAHTGLLRALIEEGLEPSKLTGSS 60
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: A0A521TXX2_9DELT (Patatin n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A521TXX2_9DELT) HSP 1 Score: 57.8 bits (138), Expect = 1.690e-8 Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 16 MASGTLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
M++ TLR WL EGPF+LA+SS + G + HAG + ALV++G SP +GSS
Sbjct: 1 MSTPTLRAWLHEGPFTLAMSSGFFGFYVHAGALTALVDAGFSPEAATGSS 50
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: A0A0F6SGK1_9DELT (PNPLA domain-containing protein n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6SGK1_9DELT) HSP 1 Score: 56.6 bits (135), Expect = 4.580e-8 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 28 TLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
TLREWL EGPF+LA+SS + G + H GV+ L + GL P++ SGSS
Sbjct: 7 TLREWLHEGPFALAMSSGFFGFFAHTGVLSVLEDEGLVPSRASGSS 52
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: A0A2D5QR51_9DELT (Patatin n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2D5QR51_9DELT) HSP 1 Score: 55.8 bits (133), Expect = 9.720e-8 Identity = 29/55 (52.73%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 1 LSKTGMASGTLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
LS+ ++ TLR WL + PFSLALSS + G + HAGVV AL GL P ++ GSS
Sbjct: 14 LSEAHSSNLTLRTWLNQAPFSLALSSGFFGFFAHAGVVSALEMEGLKPQRLMGSS 68
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: B5JSH1_9GAMM (Phospholipase, patatin family n=1 Tax=gamma proteobacterium HTCC5015 TaxID=391615 RepID=B5JSH1_9GAMM) HSP 1 Score: 54.3 bits (129), Expect = 3.220e-7 Identity = 27/48 (56.25%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 22 SGTLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
S TL++WL E PF+L LSS + + H G+ AL ESGL PAK+SGSS
Sbjct: 2 SQTLQQWLSEKPFTLCLSSGFFSFYAHLGLWAALEESGLKPAKLSGSS 49
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: UPI001FEB32FD (patatin-like phospholipase family protein n=1 Tax=Pleionea sediminis TaxID=2569479 RepID=UPI001FEB32FD) HSP 1 Score: 53.1 bits (126), Expect = 8.340e-7 Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1
Query: 28 TLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
TL WL E PF+L +SS + G + HAGV+ AL E L PAKV+GSS
Sbjct: 2 TLHNWLQEKPFTLTMSSGFFGFFAHAGVLSALAEHNLFPAKVTGSS 47
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Match: A0A2N8LY58_9GAMM (PNPLA domain-containing protein n=5 Tax=Alcanivoracaceae TaxID=224372 RepID=A0A2N8LY58_9GAMM) HSP 1 Score: 51.6 bits (122), Expect = 3.040e-6 Identity = 26/48 (54.17%), Postives = 34/48 (70.83%), Query Frame = 1
Query: 22 SGTLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSS 165
S TL +WL PF+LA+SS + G + H GVV AL E GL+PA++ GSS
Sbjct: 5 SQTLADWLAAKPFTLAMSSGFFGFFAHFGVVKALQEHGLTPARLCGSS 52 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67837.17711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig67837.17711.1 >prot_Ecto-sp13_S_contig67837.17711.1 ID=prot_Ecto-sp13_S_contig67837.17711.1|Name=mRNA_Ecto-sp13_S_contig67837.17711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp MASGTLREWLGEGPFSLALSSSWLGLWCHAGVVCALVESGLSPAKVSGSSback to top mRNA from alignment at Ecto-sp13_S_contig67837:36..200- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig67837.17711.1 ID=mRNA_Ecto-sp13_S_contig67837.17711.1|Name=mRNA_Ecto-sp13_S_contig67837.17711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=165bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67837:36..200- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig67837:36..200- >mRNA_Ecto-sp13_S_contig67837.17711.1 ID=mRNA_Ecto-sp13_S_contig67837.17711.1|Name=mRNA_Ecto-sp13_S_contig67837.17711.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=150bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67837:36..200- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |