mRNA_Ecto-sp13_S_contig677.17691.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig677.17691.1
Unique NamemRNA_Ecto-sp13_S_contig677.17691.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 942 bits (2436), Expect = 0.000e+0
Identity = 558/620 (90.00%), Postives = 565/620 (91.13%), Query Frame = 1 
Query:   34 MSGIYPRQWADRKKQQAPARKRRLVTYTMQPLNEQPGHRFGVNRILRLGEDSLLSAGRDGVIRLWDVSSMLDQAAARGSAGGGRRDDAXXXXXXXPQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNTDKGGREAXXXXXXXXXXXXXXRMEVGGRDEEDYRRWGLGGRGEEAAGEANGSGTGMHGVQDAAARAXXXXXXXXXXXXXXXXXRPSALATVAGHGDYVKCLTYAEQHGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAADGGGXXXXXXXXXXXXXXNAMMNSAGYSPAAGRQLGGGQRQGAGAPWLSDEGEGGWTHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAASAVVTA-AXXXXXXXXXXXXXXXXXVFDVTPPFAEYPAEGEGEAGGMGGEGGGCLL 1890
            MSGI PRQW DRKKQ APARKRRLVTYTMQPLNEQPGHRFGVNRI+RLGED LLSAGRDGVIR WDVSSMLDQAAARGSAG GRRDDA        QHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARN DKGGREAXXXXXXXXXXXXXX               GLGG+GEEAAGEANG  TGMHGVQD AARAXXXXXXXXXXXXXXXXXRP+ALATVAGHGDYVKCLTYAEQ GVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGA     XXXXXXXXXXXXXX  MMNSAGYSPAAGRQ  GGQRQGAGAPWLSDEGEGGW HLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGG QAAK+CKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGT+S+GPYE+PM MWLSSTQPHIALWGGEASGGGLALRSGRPAASA V A A  XXXXXXXXXXXXXXXVFDVTPPF E PAE  GEAGGMGGEGGGCLL
Sbjct:    1 MSGINPRQWTDRKKQ-APARKRRLVTYTMQPLNEQPGHRFGVNRIMRLGEDILLSAGRDGVIRRWDVSSMLDQAAARGSAGSGRRDDADDADEHQLQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNADKGGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGGQGEEAAGEANGLRTGMHGVQDTAARAXXXXXXXXXXXXXXXXXRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAXXXXXXXXXXXXXXXXXXXXXMMNSAGYSPAAGRQQVGGQRQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGAQAAKICKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTESSGPYEEPMFMWLSSTQPHIALWGGEASGGGLALRSGRPAASAGVAAVADGXXXXXXXXXXXXXXXVFDVTPPFPEDPAERGGEAGGMGGEGGGCLL 619
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BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: D8LJZ3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ3_ECTSI)

HSP 1 Score: 660 bits (1703), Expect = 3.750e-228
Identity = 404/591 (68.36%), Postives = 408/591 (69.04%), Query Frame = 1 
Query:  118 MQPLNEQPGHRFGVNRILRLGEDSLLSAGRDGVIRLWDVSSMLDQAAARGSAGGGRRDDAXXXXXXXPQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNTDKGGREAXXXXXXXXXXXXXXRMEVGGRDEEDYRRWGLGGRGEEAAGEANGSGTGMHGVQDAAARAXXXXXXXXXXXXXXXXXRPSALATVAGHGDYVKCLTYAEQHGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAADGGGXXXXXXXXXXXXXXNAMMNSAGYSPAAGRQLGGGQRQGAGAPWLSDEGEGGWTHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAASAVVTAAXXXXXXXXXXXXXXXXXVFDVTPPFAEYPAEGEGEAGGMGGEGGGCLL 1890
            MQPLN QPGHRFGVNRILRLGEDSLLSAGRDGV+R WDVSSMLDQAAARGSAG GRRDD                                                                                                                   GMHG        XXXXXXXXXXXXXXXX RP+ALATVAGHGDYVKCLTYAEQ GVLVSGGLDKRILLWDLQRMSAPLMVLRGGSG      XXXXXXXXXXXXXX       GYSP           QGAGAPWLSDEGEGGW HLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGR GG+D T   EQPMSMWLSSTQPHIALWGGEASGGGL LRSGRPAASA  +A                  VF VTPPFAE PAEG GEAGGMGGE GGCLL
Sbjct:    1 MQPLNGQPGHRFGVNRILRLGEDSLLSAGRDGVVRRWDVSSMLDQAAARGSAGSGRRDD-------------------------------------------------------------------------------------------------------------------GMHGGXXXXXXXXXXXXXXXXXXXXXXXLRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGXXX---XXXXXXXXXXXXXXXXXXXXXGYSPXXXXXXXXXXXQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGREGGSDGTDSCEQPMSMWLSSTQPHIALWGGEASGGGLVLRSGRPAASAGASAVADGEGDRAEEDDMDMD-VFGVTPPFAEDPAEGGGEAGGMGGERGGCLL 472
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BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A8J4CQE7_9CHLO (Uncharacterized protein n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CQE7_9CHLO)

HSP 1 Score: 116 bits (290), Expect = 3.130e-23
Identity = 64/171 (37.43%), Postives = 104/171 (60.82%), Query Frame = 1 
Query: 1165 SVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVY-YSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELEL-GRGGGTDSTGPYEQPMSMWLSSTQPHIALW 1671
            SV+ +A +  A L+A+G ++ ++RLLDPRAG      VCKL GH D VR + ++  GTR++SG+SDG I++WDV  + C+  +E+   SVW++  SPCD   Y YS GR R +YRT+ +T  + L+ + ++ V  + ++   R G     G     + +W +++  H+ LW
Sbjct:  168 SVYALALSPSARLLAAGTSESLVRLLDPRAG----TSVCKLKGHKDVVRTLAVNSCGTRLLSGASDGAIKLWDVGMRRCIQTFEVHTDSVWSLV-SPCDSLTYVYSAGRDRAIYRTNTQTCCAELLALEEAPVRALAVDQDARPGPPGDFGSAR--VGLWAATSASHVNLW 331
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BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A8J4BNG0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BNG0_9CHLO)

HSP 1 Score: 114 bits (284), Expect = 1.680e-22
Identity = 62/176 (35.23%), Postives = 106/176 (60.23%), Query Frame = 1 
Query: 1150 RQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVY-YSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELEL-GRGGGTDSTGPYEQPMSMWLSSTQPHIALW 1671
            R+   SV+ +A    A L+A+G ++ ++RLLDPR+G      VCKL GH D VR + ++  GT+++SG+SDG I++WDV  + C+  +E+   SVW++  SPCD   Y YS GR R +YRT+ +T  + L+ + ++ V  + ++   R G +   G     + +W +++  H+ +W
Sbjct:  163 REEPCSVYALALGPSARLLAAGTSESLVRLLDPRSG----RSVCKLKGHKDVVRTLAVNSCGTKLLSGASDGAIKLWDVGMRRCIQTFEVHTDSVWSLV-SPCDSLAYVYSAGRDRAIYRTNTQTCCAELLALEEAPVRALAVDQDARPGPSGDFGSAR--VGLWAATSASHVNMW 331
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BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: UPI001C4C6EF9 (LOW QUALITY PROTEIN: WD repeat-containing protein 48-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4C6EF9)

HSP 1 Score: 112 bits (280), Expect = 3.470e-22
Identity = 64/178 (35.96%), Postives = 101/178 (56.74%), Query Frame = 1 
Query: 1156 NKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRV-----VSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESS-LVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW 1671
            NK S++ +A     +++ SG T++++R+ DPR      AK+ KL GH DNV+ + ++  GT+V     VSGSSDGTIR+W + QQ C+  Y +    VWA+Q +     VY SGGR +++Y TD R  +   L+C   + VL MEL+             + P ++W+S+T+  +  W
Sbjct:  167 NKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRT----CAKLMKLKGHTDNVKSLLLNRDGTQVSTDLAVSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVY-SGGRDKKIYCTDLRNPDIRVLICEEKAPVLKMELDRSA----------DPPPAIWVSTTKSSVNKW 329
[Close]
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: D8UDZ2_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UDZ2_VOLCA)

HSP 1 Score: 108 bits (269), Expect = 9.160e-21
Identity = 55/143 (38.46%), Postives = 90/143 (62.94%), Query Frame = 1 
Query: 1150 RQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELE 1578
            R+   SV+ +A +  A L+A+G ++ ++RLLDPR GGG    VCKL GH D VR + ++  GT+++SG+SDGTI++WDV  + C+  +++   SVWA+      L   YS GR R ++RT+ +T  S L+ + +  V  + ++
Sbjct:  179 REEACSVYSLALSPSAGLLAAGTSESLVRLLDPRTGGG----VCKLRGHKDVVRALAVNSCGTKLLSGASDGTIKLWDVGMRRCVQTFQVHADSVWALLSPDDSLSYVYSAGRDRALFRTNTQTCFSELLALENGPVCALAVD 317
[Close]
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A150GVM6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GVM6_GONPE)

HSP 1 Score: 103 bits (257), Expect = 9.110e-20
Identity = 67/215 (31.16%), Postives = 101/215 (46.98%), Query Frame = 1 
Query: 1162 GSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCL-------------------------------GVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW-------GGEASGG 1692
            GSV+ +A  + AS+VA+G ++ +IRLLDPR+G     K+ KL GH D VR + ++  GT ++SG+SDG+I++WDV  Q C+                                 Y +   SVW++        V YS GR R +YRT   +  + L+ V D  V  M L+   G      G       +W+++   H+ LW       GG  +GG
Sbjct:  177 GSVYALALNSSASVVAAGTSEALIRLLDPRSG----KKIAKLRGHQDTVRALLVNSDGTTLLSGASDGSIKLWDVGMQRCVQTTPPYPPSENRPSXXXXXXXXXXXXXXXXXXTYTVHSDSVWSLLSPDDSFSVIYSAGRDRALYRTHTHSRTTELLAVEDGPVTAMALDSDVGAAGPGGGGAP---GLWVATPASHVNLWVLPREAPGGAGTGG 384
[Close]
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A662YR29_ACIRT (WD repeat-containing protein 48 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A662YR29_ACIRT)

HSP 1 Score: 104 bits (260), Expect = 1.140e-19
Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 1 
Query: 1225 RMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESS-LVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW 1671
            +++R+ DPR      AK+ KL GH DNV+ + ++  GT+ +SGSSDGTIR+W + QQ C+  Y +    VWA+Q +     VY SGGR R++Y TD R  +   L+C   + VL MEL+             + P ++W+S+T+  +  W
Sbjct:   52 KVLRVWDPRT----CAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVY-SGGRDRKIYCTDLRNPDIRVLICEEKASVLKMELDRSA----------DPPPAIWVSTTKSSVNKW 186
[Close]
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A6I8RNR1_XENTR (WD repeat-containing protein 48 n=3 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8RNR1_XENTR)

HSP 1 Score: 104 bits (259), Expect = 1.300e-19
Identity = 59/173 (34.10%), Postives = 96/173 (55.49%), Query Frame = 1 
Query: 1156 NKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSL-VCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW 1671
            NK S++ +A     +++ SG T++++R+ DPR       K+ KL GH DNV+ + +       +SGSSDGTIR+W + QQ C+  Y +    VWA+Q +     VY SGGR R++Y TD R  +  L +C   + VL MEL+             + P+++W+++T+  +  W
Sbjct:  170 NKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRT----CQKLMKLKGHTDNVKALTLLN--AECLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEGFTHVY-SGGRDRKIYCTDLRNPDIRLLICEEKAPVLKMELDRSA----------DPPLALWVATTKSSVNKW 325
[Close]
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A3L7HN06_CRIGR (WD repeat-containing protein 48 n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A3L7HN06_CRIGR)

HSP 1 Score: 103 bits (258), Expect = 1.640e-19
Identity = 57/153 (37.25%), Postives = 87/153 (56.86%), Query Frame = 1 
Query: 1216 GTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESS-LVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW 1671
            GT  ++R+ DPR      AK+ KL GH DNV+ + ++  GT+ +SGSSDGTIR+W + QQ C+  Y +    VWA+Q +     VY SGGR R++Y TD R  +   L+C   + VL MEL+             + P ++W+++T+  +  W
Sbjct:  187 GTIIVLRVWDPRT----CAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVY-SGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSA----------DPPPAIWVATTKSTVNKW 324
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE0.000e+090.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJZ3_ECTSI3.750e-22868.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A8J4CQE7_9CHLO3.130e-2337.43Uncharacterized protein n=4 Tax=Volvox reticulifer... [more]
A0A8J4BNG0_9CHLO1.680e-2235.23Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
UPI001C4C6EF93.470e-2235.96LOW QUALITY PROTEIN: WD repeat-containing protein ... [more]
D8UDZ2_VOLCA9.160e-2138.46Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A150GVM6_GONPE9.110e-2031.16Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A662YR29_ACIRT1.140e-1937.33WD repeat-containing protein 48 n=1 Tax=Acipenser ... [more]
A0A6I8RNR1_XENTR1.300e-1934.10WD repeat-containing protein 48 n=3 Tax=Xenopus tr... [more]
A0A3L7HN06_CRIGR1.640e-1937.25WD repeat-containing protein 48 n=2 Tax=Boreoeuthe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig677contigEcto-sp13_S_contig677:1..5523 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score661.4
Seed ortholog evalue4.3e-187
Seed eggNOG ortholog2880.D8LJZ3
Preferred nameWDR48
Model size1892
KEGG koko:K15361
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000724,GO:0000725,GO:0001501,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0007276,GO:0007283,GO:0007338,GO:0007548,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008284,GO:0008406,GO:0008584,GO:0009566,GO:0009653,GO:0009790,GO:0009887,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0016579,GO:0016787,GO:0019222,GO:0019538,GO:0019783,GO:0019953,GO:0022414,GO:0030162,GO:0030428,GO:0031323,GO:0031325,GO:0031396,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032182,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0033554,GO:0034641,GO:0035264,GO:0035295,GO:0036211,GO:0036459,GO:0040007,GO:0040012,GO:0040017,GO:0042127,GO:0042592,GO:0042769,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043588,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0045137,GO:0045862,GO:0046483,GO:0046546,GO:0046661,GO:0048232,GO:0048513,GO:0048518,GO:0048520,GO:0048522,GO:0048568,GO:0048589,GO:0048608,GO:0048609,GO:0048705,GO:0048731,GO:0048856,GO:0048872,GO:0050678,GO:0050679,GO:0050789,GO:0050794,GO:0050795,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051286,GO:0051606,GO:0051704,GO:0051716,GO:0060255,GO:0060341,GO:0061458,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0072520,GO:0080090,GO:0090085,GO:0090304,GO:0090325,GO:0090326,GO:0101005,GO:0140096,GO:1901360,GO:1901564,GO:1902525,GO:1903003,GO:1903320,GO:1903322,GO:1903827,GO:1903829,GO:2000008,GO:2000010
Exons7
EggNOG free text desc.regulation of protein monoubiquitination
EggNOG OGsKOG0308@1,KOG0308@2759
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-06_007540.1
Cds size1890
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig677.17691.1prot_Ecto-sp13_S_contig677.17691.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig677 1..5523 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463930.515533-CDS-Ecto-sp13_S_contig677:0..3081681463930.515533-CDS-Ecto-sp13_S_contig677:0..308Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 1..308 -
1681463930.5314322-CDS-Ecto-sp13_S_contig677:582..7131681463930.5314322-CDS-Ecto-sp13_S_contig677:582..713Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 583..713 -
1681463930.54655-CDS-Ecto-sp13_S_contig677:1425..15321681463930.54655-CDS-Ecto-sp13_S_contig677:1425..1532Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 1426..1532 -
1681463930.5588853-CDS-Ecto-sp13_S_contig677:2118..28221681463930.5588853-CDS-Ecto-sp13_S_contig677:2118..2822Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 2119..2822 -
1681463930.5694315-CDS-Ecto-sp13_S_contig677:3407..37521681463930.5694315-CDS-Ecto-sp13_S_contig677:3407..3752Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 3408..3752 -
1681463930.5794075-CDS-Ecto-sp13_S_contig677:4247..44641681463930.5794075-CDS-Ecto-sp13_S_contig677:4247..4464Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 4248..4464 -
1681463930.589609-CDS-Ecto-sp13_S_contig677:5445..55231681463930.589609-CDS-Ecto-sp13_S_contig677:5445..5523Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig677 5446..5523 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig677.17691.1

>prot_Ecto-sp13_S_contig677.17691.1 ID=prot_Ecto-sp13_S_contig677.17691.1|Name=mRNA_Ecto-sp13_S_contig677.17691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=630bp
SECITIPAGSNMSGIYPRQWADRKKQQAPARKRRLVTYTMQPLNEQPGHR
FGVNRILRLGEDSLLSAGRDGVIRLWDVSSMLDQAAARGSAGGGRRDDAD
DADEHQPQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDL
AAADRARNTDKGGREAAAAAAAAAAVVAARRMEVGGRDEEDYRRWGLGGR
GEEAAGEANGSGTGMHGVQDAAARAAASNRRTPPLPPPPPPPRPSALATV
AGHGDYVKCLTYAEQHGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAA
DGGGSDGGWGAGAGSASNNAMMNSAGYSPAAGRQLGGGQRQGAGAPWLSD
EGEGGWTHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADAS
LVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVS
GSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRV
YRTDFRTGESSLVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSST
QPHIALWGGEASGGGLALRSGRPAASAVVTAAAADGDGDRAEEDDMDMDV
FDVTPPFAEYPAEGEGEAGGMGGEGGGCLL
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mRNA from alignment at Ecto-sp13_S_contig677:1..5523-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig677.17691.1 ID=mRNA_Ecto-sp13_S_contig677.17691.1|Name=mRNA_Ecto-sp13_S_contig677.17691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5523bp|location=Sequence derived from alignment at Ecto-sp13_S_contig677:1..5523- (Ectocarpus species13 EcNAP12_S_4_19m)
TCGGAGTGTATCACGATACCTGCTGGTTCCAACATGAGCGGGATTTATCC
CCGCCAGTGGGCCGACAGGAAGAAGCAGGTGATGCGAAGAGATGGAGTTG
CGTCGATGCAGGCTGAGTTGTTGCCTTTTATACGACGTGCGATTTGGTGG
ACGGGATGAAATTTCAAATCCGTCTCCATTTTCAGGTCTTTCTACTTCCG
CTATCTATGCCATGCATAGTTGCTCTGTCGTTGCTGTGTCTCGTCATGGG
ATAACCAGAATTGGGTTCCGACCAGGACGCACTTTTGCATGGGCTCACCA
GGAACGGAGATTAACCCACGTCCCAAGCCAAAATGGTTGTGGGTAAGTTT
TCAAAGGAGATGCTGTGCGGCGAGTCCTCGCGGCCCATATTTTCGCCTGC
TTTGCCTGCTGTCTCTTGATAGATAACCCCACCGCAACCCCGGTTCCATT
CCCGCATCACTCCTCATTTCTCTCTGCACTCGCATCCGAACCCGAAAAGC
CCGCCTTGGTCCTGCTGCTTCTGGTGCCACGAAATAAACCACCAGACATT
CACTGCAATTACAGTAGCTCTACCGTCATCGCATAATCTATACGCTGCAC
TTCCCCATCTTGAGGCATTTTCTCGAACGTTCTCGAACGGGTAGTCTACA
TAGAATACAGTACAGTAGTACGCTGATGCGATTTCGAATGTGAATGCCAG
GCATGCCATCACACATCATGTAGGAAACGATACGCTGTATGTGGTACACA
GGGCTACATGTTGCCAATCCCTTATCGTGCTTGACGCTTGACGCACGCAT
TTAGTCTGTAGCGGGGAGTCTTCGATACAGATAAGTGTGTCAGAGGGAAG
AAGCTTGAGTACAGAATATTGTGCACAACGAATTATCCCGAAGCGCGAAC
ACGTCTCCCGAACTACAGTAGTCCTCTCAGGATTGCTGCTGTCCGCCTCT
CGACTATGCAAACAAACAACCGAGTTGTACCGGGGGGGGGGGACTCTACA
CCCACAAAACTTCAAAAAAAAAAACGCCTGGTTGGCCGATCAAAACAAAA
AACACGCAGCAGGCCCCTGCAAGAAAGCGACGATTGGTGACCTACACCAT
GCAGCCCTTGAACGAGCAGCCCGGACACCGCTTCGGCGTGAACCGCATCC
TGCGGCTGGGCGAGGACAGCCTACTCTCCGCCGGTCGCGACGGGGTGATT
CGGCTATGGGACGTTTCCTCGATGCTTGATCAGGCGGCAGCAAGAGGAAG
CGCCGGCGGCGGACGACGAGATGATGGTGCGAAAAACGCTTCTCTCGCCC
CGTATATGCGTTTGCGTACGTGCTCAACAGTCTGGTCTTTTGCGCGGCGG
CGGCGGCGGCGGCGGCGGCCTGTATTTTGCCTGTCCGAGCGTGTTCCTTG
TCTGTCGATCAATCTTGACCGTGGAGCCTATTTGGACACCAGCTCTTTCT
CTTCTTCGTTTGACGTCGATTGGTTGTCGATTTGAGTGCTGTTATCCAAC
TTGTTCGCACATGATCCCCCCTCCCCAACACGCAAATGCTAGGATCACAC
CAAGCGTAGCGGCAGGAGCGGAGAGACTCGGCAATGCCACTCAGAGCAAG
ATCGTTGCAGTGTTTTTTTTTCGCCTACTCTCTTTGAGCTTTTTCTTCCC
GATATTGTATGCTTTCTGCCTACCCTCCCAATGCCAAGACGTACGCTCCA
ACACCCGGCTGCGACCCTCCCCCCCCCCCCCCGCCCCTCTCCGTCCAAAC
GTCACAACCATCGTCCACCAGCCGACGACGCGGACGAACATCAACCGCAG
CACCCTCAGCCACCGTGCACCGGCGTTTTCGCCTCCCACACGGACTGGGT
TACTGGCCTCGCGGTAGCCGAGGGCCGCATCATGGCATCCGCGTCCTACG
ACGGCACTCTCAAGCTGTGGGACCTGGCGGCCGCAGATAGAGCCCGCAAC
ACCGACAAAGGCGGACGAGAAGCAGCAGCGGCAGCGGCAGCAGCAGCAGC
GGTGGTCGCCGCGCGTCGAATGGAGGTCGGGGGCAGGGATGAGGAGGATT
ACCGACGGTGGGGGCTAGGGGGACGGGGCGAGGAGGCAGCAGGAGAGGCG
AACGGGTCAGGGACAGGTGACGGAGGAGGCAGTGTGCGGTGGGTGTTTTG
TGGGCCGGCCGAATTACGACGTGTGGGGCCGTGTGTGTGAAACGTCCTTC
CAAAGTGCTGCTTTCGAGTGTTAGTTCGGGTGGAGTGGTAGATCCTCTTT
GGCGATTTGGCAGCACCCCTGTTTCTGTTCTTCCAGGGAAGGGCGCAGCG
GAAAGGGAAGGCGTAGGGTATCGTCTGTTCCAATCGGGAGTGTAGAAGAG
ATTGAATTCGTCTGACTGACGGCCGACTAGCGGTTTGACGGCGTCGCTTC
TACTACCTACGCGCGAAGCCAGGAAATCCGGTTGAAGGACGGTTCCTCAA
GCGGTGAGATCAGCACTAAAAAGAACCTCTCATATTCGTCACCTCCCGCT
TTCTCTGATGTTGCCTTGCCCAGTCGTGTATTCATAGTTGACGTTTCAGA
CAGGATCATGCGCCGCACATCCAAAATTTCGGACAGCGAAGAAGTTGCGG
GCGTTTTCCATGTCAGAGCAGAGGGACTGAAAGGTCGATTGCGTTTTTCT
GTTCCAACACAAAAACTCCACCCTCCCCCCCTTTTGCCGTGTGCCCTCCA
GGCATGCATGGCGTCCAAGACGCCGCTGCGAGAGCAGCGGCATCGAACAG
AAGAACGCCGCCGCTGCCGCCGCCTCCGCCGCCCCCCCGCCCCAGCGCTC
TGGCCACGGTCGCTGGCCACGGCGACTACGTCAAGTGCCTGACGTACGCG
GAGCAGCACGGCGTTCTTGTCTCGGGGGGGCTGGACAAGCGCATCCTCTT
GTGGGACCTGCAGCGGATGTCGGCGCCGCTGATGGTCCTGCGCGGCGGGT
CGGGGGCAGCAGATGGCGGCGGCTCGGACGGCGGCTGGGGAGCGGGGGCA
GGAAGCGCGAGCAACAACGCGATGATGAATTCCGCCGGCTACTCGCCGGC
CGCGGGGCGACAGCTGGGGGGCGGGCAACGACAAGGCGCGGGGGCTCCGT
GGTTGAGCGACGAGGGCGAAGGGGGGTGGACCCACCTCAGGGACCCCTTG
CGCGTGGCGCTGAGGGCTGGGCAGGCGGCGGCCGGGCCGAACGAGGTCCT
GGAGCTCTGTCGGCAGAACAAGGGCTCGGTGCACTGCGTGGCGGCCGCCG
CGGACGCGTCTCTCGTTGCGAGCGGCGGCACGGACCGCATGATCCGCCTC
CTGGACCCGAGGGCCGGCGGGGGGCAGGCGGCCAAGGTCTGCAAGCTGGA
CGGTCACGGGGACAACGTGCGCTGCGTGAAGATCGACGAGGGCGGCACTC
GCGTGGTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTCTCTCT
CTCTGCCTCTCTCTCTCGCTCTCGATCGAATAAGACTCCTCTTGCTTGTG
TAGGTTTCCTGTCGTGCTCATTGCTCGCTTGCCTGTAATCTTGCTGTCTG
TCACTCGATTTTTTCTGCTCCCATTGTGCAGTCATCTCGCCTGCGTTTGA
CCGATCTCTATCGCCGTGGAATCGTCTCATGTACCGCTTCGCTTGCTCCT
GCTTTGGCACCTGATGGGTCAGTGCGACAAAGCTGCGTACTCGTAAGTCT
CTAACCTGCCCGGCAGCCGGCCGCCGGTTTGTGCTTGCAACCGTTCACCA
TCGAACTCGAGCGACCCTTTTCTACCGTCGTCCATAGTCCTTGCTGCACG
CGCGCCTGCCCCGCCTTCCTCGCGGCCGGCCACCCCGCCGTGCATCGTCG
TGCGGCTGCTCGGTCCTTGGAGGGCGTCATTTCACGTCATGTCGTCTCAT
GTCATGTCGTGTCGTGCCACGTCATCTGATTCCGTGTCACGTTGTCTCAT
GTCATGTCATGCCATGTCGTGTCATGCCATGTCATGTTCAGGTGTCCGGC
TCCTCCGACGGCACGATCAGGGTGTGGGACGTGCGGCAGCAGTGCTGCCT
GGGCGTGTACGAGCTTCCCGGCGGATCAGTGTGGGCGATGCAGCCGAGGT
GGGTGTAGGTTATGTAGGGAGGGGGTCAGGTGAGAGTGGAGGGGAGGGGG
GGGGTATACCAGAGGCGTGCAGAGCACAACATCGCGTGCGTGTGGCAAGG
ACAAGTCCTTTGTTGAGACACGAGCAATACACGTCGACACGACACGATCC
CTCGTGGGCGTTGGACGTGTTGTTGTTGTCTGGTGGTGGTAGTAGCGGTA
GTTGTATGTTGTGCATGGTAGACTCGAGGTTTGCAGCGTGAGTTCTCGTC
TATTTTGCACAGGGCCTCGAAAACACGTCAGCGGCGACTGGGGGGAGCGG
GGGGCGTGTCATGTGTGCTCTTACCTGCTTTGTTTGGTGTTTGGCGGGTT
GTTTCATGTGGGCCCCCCTTCCCCATATGGAGGTGGTGGCCTGGAGTGTG
CTGTAGCCCGCAGCTTTGAGCCTAATACAGTGGTGGTTGATTCAGAAGGC
GCGGTAGACGTGTTGTGCCCCCCCCTCCCCCTCCCCTCTCGTCAATGTCG
AAGTCGACCTTTTGTGTTTCACGCAGACCACCTTTGGGTACCTCTTTCGA
TTTTTTTCCACGATTCACGCCGTTGCTTCTCGCTTCGAGTGTGGCTCCTC
CATTGCTACCGCCGTCTCCGCCGTCCCCCCTGCTCCTATTGATCAACCTC
ACCCCCTAGCACCGCGTTTGGCTCGTTGTTGCGTTGTTCCCCGGGGGCGT
GTATACGAAGCCCCTGCGACTTGGACGTGTACTATAGTGGTGGCCGAGGG
AGGCGGGTCTATCGCACGGACTTCCGCACGGGAGAGAGCTCGTTGGTGTG
CGTGACCGACTCGGAAGTGTTGGACATGGAGCTCGAACTCGGTGAGTGCT
GTTGAACTGGGGTTAGGCGCAAGCCTCGCCGGATTTGTAGGCGACGGCCA
CGTCTATGCGATTGCTCTCTTCGTATCAAGCACCCCCAAGGGGGTCACAG
GCTCGCAACGTCTGGACGATTGCAGCAGCTTTGATCAGTTTCGGTGTTAA
CTAACTCTTTCCGATGGCCACCTTCTCTGTCGCCCCCTCTCCTACCCATG
TGCGGGCTCGGCCGCAAACTCCCGGGGGGCAATGCGGAATACTCAACGCA
TGCCACGGGTTTCAGGTCGAGGAGGGGGCACCGACAGCACCGGCCCGTAC
GAGCAGCCCATGTCCATGTGGCTCTCCTCCACGCAGCCCCACATCGCCCT
TTGGGGGGGTGAGGCAAGCGGCGGGGGCCTTGCGCTCCGATCCGGTCGCC
CAGCGGCATCGGCCGTGGTGACGGCGGCGGCGGCGGACGGCGATGGGGAC
AGGGCGGAGGAAGACGACATGGACATGGATGTGTTTGACGTCACGCCGCC
CTTCGCCGAGTACCCAGCGGAGGGAGAAGGGGAAGCAGGGGGTATGGGCG
GCGAAGGCGGCGGGTGTCTATTG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig677:1..5523-

>mRNA_Ecto-sp13_S_contig677.17691.1 ID=mRNA_Ecto-sp13_S_contig677.17691.1|Name=mRNA_Ecto-sp13_S_contig677.17691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1890bp|location=Sequence derived from alignment at Ecto-sp13_S_contig677:1..5523- (Ectocarpus species13 EcNAP12_S_4_19m)
TCGGAGTGTATCACGATACCTGCTGGTTCCAACATGAGCGGGATTTATCC
CCGCCAGTGGGCCGACAGGAAGAAGCAGCAGGCCCCTGCAAGAAAGCGAC
GATTGGTGACCTACACCATGCAGCCCTTGAACGAGCAGCCCGGACACCGC
TTCGGCGTGAACCGCATCCTGCGGCTGGGCGAGGACAGCCTACTCTCCGC
CGGTCGCGACGGGGTGATTCGGCTATGGGACGTTTCCTCGATGCTTGATC
AGGCGGCAGCAAGAGGAAGCGCCGGCGGCGGACGACGAGATGATGCCGAC
GACGCGGACGAACATCAACCGCAGCACCCTCAGCCACCGTGCACCGGCGT
TTTCGCCTCCCACACGGACTGGGTTACTGGCCTCGCGGTAGCCGAGGGCC
GCATCATGGCATCCGCGTCCTACGACGGCACTCTCAAGCTGTGGGACCTG
GCGGCCGCAGATAGAGCCCGCAACACCGACAAAGGCGGACGAGAAGCAGC
AGCGGCAGCGGCAGCAGCAGCAGCGGTGGTCGCCGCGCGTCGAATGGAGG
TCGGGGGCAGGGATGAGGAGGATTACCGACGGTGGGGGCTAGGGGGACGG
GGCGAGGAGGCAGCAGGAGAGGCGAACGGGTCAGGGACAGGCATGCATGG
CGTCCAAGACGCCGCTGCGAGAGCAGCGGCATCGAACAGAAGAACGCCGC
CGCTGCCGCCGCCTCCGCCGCCCCCCCGCCCCAGCGCTCTGGCCACGGTC
GCTGGCCACGGCGACTACGTCAAGTGCCTGACGTACGCGGAGCAGCACGG
CGTTCTTGTCTCGGGGGGGCTGGACAAGCGCATCCTCTTGTGGGACCTGC
AGCGGATGTCGGCGCCGCTGATGGTCCTGCGCGGCGGGTCGGGGGCAGCA
GATGGCGGCGGCTCGGACGGCGGCTGGGGAGCGGGGGCAGGAAGCGCGAG
CAACAACGCGATGATGAATTCCGCCGGCTACTCGCCGGCCGCGGGGCGAC
AGCTGGGGGGCGGGCAACGACAAGGCGCGGGGGCTCCGTGGTTGAGCGAC
GAGGGCGAAGGGGGGTGGACCCACCTCAGGGACCCCTTGCGCGTGGCGCT
GAGGGCTGGGCAGGCGGCGGCCGGGCCGAACGAGGTCCTGGAGCTCTGTC
GGCAGAACAAGGGCTCGGTGCACTGCGTGGCGGCCGCCGCGGACGCGTCT
CTCGTTGCGAGCGGCGGCACGGACCGCATGATCCGCCTCCTGGACCCGAG
GGCCGGCGGGGGGCAGGCGGCCAAGGTCTGCAAGCTGGACGGTCACGGGG
ACAACGTGCGCTGCGTGAAGATCGACGAGGGCGGCACTCGCGTGGTGTCC
GGCTCCTCCGACGGCACGATCAGGGTGTGGGACGTGCGGCAGCAGTGCTG
CCTGGGCGTGTACGAGCTTCCCGGCGGATCAGTGTGGGCGATGCAGCCGA
GCCCCTGCGACTTGGACGTGTACTATAGTGGTGGCCGAGGGAGGCGGGTC
TATCGCACGGACTTCCGCACGGGAGAGAGCTCGTTGGTGTGCGTGACCGA
CTCGGAAGTGTTGGACATGGAGCTCGAACTCGGTCGAGGAGGGGGCACCG
ACAGCACCGGCCCGTACGAGCAGCCCATGTCCATGTGGCTCTCCTCCACG
CAGCCCCACATCGCCCTTTGGGGGGGTGAGGCAAGCGGCGGGGGCCTTGC
GCTCCGATCCGGTCGCCCAGCGGCATCGGCCGTGGTGACGGCGGCGGCGG
CGGACGGCGATGGGGACAGGGCGGAGGAAGACGACATGGACATGGATGTG
TTTGACGTCACGCCGCCCTTCGCCGAGTACCCAGCGGAGGGAGAAGGGGA
AGCAGGGGGTATGGGCGGCGAAGGCGGCGGGTGTCTATTG
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