prot_Ecto-sp13_S_contig677.17691.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig677.17691.1
Unique Nameprot_Ecto-sp13_S_contig677.17691.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length630
Homology
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 942 bits (2436), Expect = 0.000e+0
Identity = 558/620 (90.00%), Postives = 565/620 (91.13%), Query Frame = 0
Query:   12 MSGIYPRQWADRKKQQAPARKRRLVTYTMQPLNEQPGHRFGVNRILRLGEDSLLSAGRDGVIRLWDVSSMLDQAAARGSAGGGRRDDAXXXXXXXPQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNTDKGGREAXXXXXXXXXXXXXXRMEVGGRDEEDYRRWGLGGRGEEAAGEANGSGTGMHGVQDAAARAXXXXXXXXXXXXXXXXXRPSALATVAGHGDYVKCLTYAEQHGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAADGGGXXXXXXXXXXXXXXNAMMNSAGYSPAAGRQLGGGQRQGAGAPWLSDEGEGGWTHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAASAVVTA-AXXXXXXXXXXXXXXXXXVFDVTPPFAEYPAEGEGEAGGMGGEGGGCLL 630
            MSGI PRQW DRKKQ APARKRRLVTYTMQPLNEQPGHRFGVNRI+RLGED LLSAGRDGVIR WDVSSMLDQAAARGSAG GRRDDA        QHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARN DKGGREAXXXXXXXXXXXXXX               GLGG+GEEAAGEANG  TGMHGVQD AARAXXXXXXXXXXXXXXXXXRP+ALATVAGHGDYVKCLTYAEQ GVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGA     XXXXXXXXXXXXXX  MMNSAGYSPAAGRQ  GGQRQGAGAPWLSDEGEGGW HLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGG QAAK+CKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGT+S+GPYE+PM MWLSSTQPHIALWGGEASGGGLALRSGRPAASA V A A  XXXXXXXXXXXXXXXVFDVTPPF E PAE  GEAGGMGGEGGGCLL
Sbjct:    1 MSGINPRQWTDRKKQ-APARKRRLVTYTMQPLNEQPGHRFGVNRIMRLGEDILLSAGRDGVIRRWDVSSMLDQAAARGSAGSGRRDDADDADEHQLQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNADKGGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGGQGEEAAGEANGLRTGMHGVQDTAARAXXXXXXXXXXXXXXXXXRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAXXXXXXXXXXXXXXXXXXXXXMMNSAGYSPAAGRQQVGGQRQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGAQAAKICKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTESSGPYEEPMFMWLSSTQPHIALWGGEASGGGLALRSGRPAASAGVAAVADGXXXXXXXXXXXXXXXVFDVTPPFPEDPAERGGEAGGMGGEGGGCLL 619          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: D8LJZ3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ3_ECTSI)

HSP 1 Score: 660 bits (1703), Expect = 3.750e-228
Identity = 404/591 (68.36%), Postives = 408/591 (69.04%), Query Frame = 0
Query:   40 MQPLNEQPGHRFGVNRILRLGEDSLLSAGRDGVIRLWDVSSMLDQAAARGSAGGGRRDDAXXXXXXXPQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNTDKGGREAXXXXXXXXXXXXXXRMEVGGRDEEDYRRWGLGGRGEEAAGEANGSGTGMHGVQDAAARAXXXXXXXXXXXXXXXXXRPSALATVAGHGDYVKCLTYAEQHGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAADGGGXXXXXXXXXXXXXXNAMMNSAGYSPAAGRQLGGGQRQGAGAPWLSDEGEGGWTHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALWGGEASGGGLALRSGRPAASAVVTAAXXXXXXXXXXXXXXXXXVFDVTPPFAEYPAEGEGEAGGMGGEGGGCLL 630
            MQPLN QPGHRFGVNRILRLGEDSLLSAGRDGV+R WDVSSMLDQAAARGSAG GRRDD                                                                                                                   GMHG        XXXXXXXXXXXXXXXX RP+ALATVAGHGDYVKCLTYAEQ GVLVSGGLDKRILLWDLQRMSAPLMVLRGGSG      XXXXXXXXXXXXXX       GYSP           QGAGAPWLSDEGEGGW HLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGR GG+D T   EQPMSMWLSSTQPHIALWGGEASGGGL LRSGRPAASA  +A                  VF VTPPFAE PAEG GEAGGMGGE GGCLL
Sbjct:    1 MQPLNGQPGHRFGVNRILRLGEDSLLSAGRDGVVRRWDVSSMLDQAAARGSAGSGRRDD-------------------------------------------------------------------------------------------------------------------GMHGGXXXXXXXXXXXXXXXXXXXXXXXLRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGXXX---XXXXXXXXXXXXXXXXXXXXXGYSPXXXXXXXXXXXQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGREGGSDGTDSCEQPMSMWLSSTQPHIALWGGEASGGGLVLRSGRPAASAGASAVADGEGDRAEEDDMDMD-VFGVTPPFAEDPAEGGGEAGGMGGERGGCLL 472          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A8J4CQE7_9CHLO (Uncharacterized protein n=4 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CQE7_9CHLO)

HSP 1 Score: 116 bits (290), Expect = 3.130e-23
Identity = 64/171 (37.43%), Postives = 104/171 (60.82%), Query Frame = 0
Query:  389 SVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVY-YSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELEL-GRGGGTDSTGPYEQPMSMWLSSTQPHIALW 557
            SV+ +A +  A L+A+G ++ ++RLLDPRAG      VCKL GH D VR + ++  GTR++SG+SDG I++WDV  + C+  +E+   SVW++  SPCD   Y YS GR R +YRT+ +T  + L+ + ++ V  + ++   R G     G     + +W +++  H+ LW
Sbjct:  168 SVYALALSPSARLLAAGTSESLVRLLDPRAG----TSVCKLKGHKDVVRTLAVNSCGTRLLSGASDGAIKLWDVGMRRCIQTFEVHTDSVWSLV-SPCDSLTYVYSAGRDRAIYRTNTQTCCAELLALEEAPVRALAVDQDARPGPPGDFGSAR--VGLWAATSASHVNLW 331          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A8J4BNG0_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BNG0_9CHLO)

HSP 1 Score: 114 bits (284), Expect = 1.680e-22
Identity = 62/176 (35.23%), Postives = 106/176 (60.23%), Query Frame = 0
Query:  384 RQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVY-YSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELEL-GRGGGTDSTGPYEQPMSMWLSSTQPHIALW 557
            R+   SV+ +A    A L+A+G ++ ++RLLDPR+G      VCKL GH D VR + ++  GT+++SG+SDG I++WDV  + C+  +E+   SVW++  SPCD   Y YS GR R +YRT+ +T  + L+ + ++ V  + ++   R G +   G     + +W +++  H+ +W
Sbjct:  163 REEPCSVYALALGPSARLLAAGTSESLVRLLDPRSG----RSVCKLKGHKDVVRTLAVNSCGTKLLSGASDGAIKLWDVGMRRCIQTFEVHTDSVWSLV-SPCDSLAYVYSAGRDRAIYRTNTQTCCAELLALEEAPVRALAVDQDARPGPSGDFGSAR--VGLWAATSASHVNMW 331          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: UPI001C4C6EF9 (LOW QUALITY PROTEIN: WD repeat-containing protein 48-like n=1 Tax=Plectropomus leopardus TaxID=160734 RepID=UPI001C4C6EF9)

HSP 1 Score: 112 bits (280), Expect = 3.470e-22
Identity = 64/178 (35.96%), Postives = 101/178 (56.74%), Query Frame = 0
Query:  386 NKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRV-----VSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESS-LVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW 557
            NK S++ +A     +++ SG T++++R+ DPR      AK+ KL GH DNV+ + ++  GT+V     VSGSSDGTIR+W + QQ C+  Y +    VWA+Q +     VY SGGR +++Y TD R  +   L+C   + VL MEL+             + P ++W+S+T+  +  W
Sbjct:  167 NKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRT----CAKLMKLKGHTDNVKSLLLNRDGTQVSTDLAVSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVY-SGGRDKKIYCTDLRNPDIRVLICEEKAPVLKMELDRSA----------DPPPAIWVSTTKSSVNKW 329          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: D8UDZ2_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UDZ2_VOLCA)

HSP 1 Score: 108 bits (269), Expect = 9.160e-21
Identity = 55/143 (38.46%), Postives = 90/143 (62.94%), Query Frame = 0
Query:  384 RQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELE 526
            R+   SV+ +A +  A L+A+G ++ ++RLLDPR GGG    VCKL GH D VR + ++  GT+++SG+SDGTI++WDV  + C+  +++   SVWA+      L   YS GR R ++RT+ +T  S L+ + +  V  + ++
Sbjct:  179 REEACSVYSLALSPSAGLLAAGTSESLVRLLDPRTGGG----VCKLRGHKDVVRALAVNSCGTKLLSGASDGTIKLWDVGMRRCVQTFQVHADSVWALLSPDDSLSYVYSAGRDRALFRTNTQTCFSELLALENGPVCALAVD 317          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A150GVM6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GVM6_GONPE)

HSP 1 Score: 103 bits (257), Expect = 9.110e-20
Identity = 67/215 (31.16%), Postives = 101/215 (46.98%), Query Frame = 0
Query:  388 GSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCL-------------------------------GVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSLVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW-------GGEASGG 564
            GSV+ +A  + AS+VA+G ++ +IRLLDPR+G     K+ KL GH D VR + ++  GT ++SG+SDG+I++WDV  Q C+                                 Y +   SVW++        V YS GR R +YRT   +  + L+ V D  V  M L+   G      G       +W+++   H+ LW       GG  +GG
Sbjct:  177 GSVYALALNSSASVVAAGTSEALIRLLDPRSG----KKIAKLRGHQDTVRALLVNSDGTTLLSGASDGSIKLWDVGMQRCVQTTPPYPPSENRPSXXXXXXXXXXXXXXXXXXTYTVHSDSVWSLLSPDDSFSVIYSAGRDRALYRTHTHSRTTELLAVEDGPVTAMALDSDVGAAGPGGGGAP---GLWVATPASHVNLWVLPREAPGGAGTGG 384          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A662YR29_ACIRT (WD repeat-containing protein 48 n=1 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A662YR29_ACIRT)

HSP 1 Score: 104 bits (260), Expect = 1.140e-19
Identity = 56/150 (37.33%), Postives = 86/150 (57.33%), Query Frame = 0
Query:  409 RMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESS-LVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW 557
            +++R+ DPR      AK+ KL GH DNV+ + ++  GT+ +SGSSDGTIR+W + QQ C+  Y +    VWA+Q +     VY SGGR R++Y TD R  +   L+C   + VL MEL+             + P ++W+S+T+  +  W
Sbjct:   52 KVLRVWDPRT----CAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHVY-SGGRDRKIYCTDLRNPDIRVLICEEKASVLKMELDRSA----------DPPPAIWVSTTKSSVNKW 186          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A6I8RNR1_XENTR (WD repeat-containing protein 48 n=3 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A6I8RNR1_XENTR)

HSP 1 Score: 104 bits (259), Expect = 1.300e-19
Identity = 59/173 (34.10%), Postives = 96/173 (55.49%), Query Frame = 0
Query:  386 NKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESSL-VCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW 557
            NK S++ +A     +++ SG T++++R+ DPR       K+ KL GH DNV+ + +       +SGSSDGTIR+W + QQ C+  Y +    VWA+Q +     VY SGGR R++Y TD R  +  L +C   + VL MEL+             + P+++W+++T+  +  W
Sbjct:  170 NKDSIYSLAMNQMGTVIVSGSTEKVLRVWDPRT----CQKLMKLKGHTDNVKALTLLN--AECLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNEGFTHVY-SGGRDRKIYCTDLRNPDIRLLICEEKAPVLKMELDRSA----------DPPLALWVATTKSSVNKW 325          
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Match: A0A3L7HN06_CRIGR (WD repeat-containing protein 48 n=2 Tax=Boreoeutheria TaxID=1437010 RepID=A0A3L7HN06_CRIGR)

HSP 1 Score: 103 bits (258), Expect = 1.640e-19
Identity = 57/153 (37.25%), Postives = 87/153 (56.86%), Query Frame = 0
Query:  406 GTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVSGSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRVYRTDFRTGESS-LVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSSTQPHIALW 557
            GT  ++R+ DPR      AK+ KL GH DNV+ + ++  GT+ +SGSSDGTIR+W + QQ C+  Y +    VWA+Q +     VY SGGR R++Y TD R  +   L+C   + VL MEL+             + P ++W+++T+  +  W
Sbjct:  187 GTIIVLRVWDPRT----CAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIATYRVHDEGVWALQVNDAFTHVY-SGGRDRKIYCTDLRNPDIRVLICEEKAPVLKMELDRSA----------DPPPAIWVATTKSTVNKW 324          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig677.17691.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE0.000e+090.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJZ3_ECTSI3.750e-22868.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A8J4CQE7_9CHLO3.130e-2337.43Uncharacterized protein n=4 Tax=Volvox reticulifer... [more]
A0A8J4BNG0_9CHLO1.680e-2235.23Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
UPI001C4C6EF93.470e-2235.96LOW QUALITY PROTEIN: WD repeat-containing protein ... [more]
D8UDZ2_VOLCA9.160e-2138.46Uncharacterized protein n=1 Tax=Volvox carteri f. ... [more]
A0A150GVM6_GONPE9.110e-2031.16Uncharacterized protein n=1 Tax=Gonium pectorale T... [more]
A0A662YR29_ACIRT1.140e-1937.33WD repeat-containing protein 48 n=1 Tax=Acipenser ... [more]
A0A6I8RNR1_XENTR1.300e-1934.10WD repeat-containing protein 48 n=3 Tax=Xenopus tr... [more]
A0A3L7HN06_CRIGR1.640e-1937.25WD repeat-containing protein 48 n=2 Tax=Boreoeuthe... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 64..78
score: 39.06
coord: 448..462
score: 41.76
coord: 136..150
score: 42.07
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 243..282
e-value: 3.8E-5
score: 33.1
coord: 464..504
e-value: 60.0
score: 5.8
coord: 111..149
e-value: 3.0E-7
score: 40.1
coord: 39..77
e-value: 0.058
score: 22.5
coord: 422..461
e-value: 3.1E-9
score: 46.7
coord: 376..415
e-value: 0.042
score: 23.0
IPR001680WD40 repeatPFAMPF00400WD40coord: 41..77
e-value: 0.037
score: 14.9
coord: 426..461
e-value: 3.7E-7
score: 30.7
coord: 248..282
e-value: 0.04
score: 14.8
coord: 114..149
e-value: 0.0025
score: 18.6
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 64..80
score: 9.272
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 429..463
score: 15.855
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 118..158
score: 12.246
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 250..291
score: 12.681
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 229..309
e-value: 2.8E-7
score: 31.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 371..562
e-value: 5.3E-27
score: 96.5
NoneNo IPR availablePANTHERPTHR44156FAMILY NOT NAMEDcoord: 55..151
coord: 242..519
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 269..283
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 136..150
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 448..462
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 64..78
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 250..291
score: 11.866
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 118..158
score: 11.524
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 383..470
score: 17.007
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 39..515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig677contigEcto-sp13_S_contig677:1..5523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig677.17691.1mRNA_Ecto-sp13_S_contig677.17691.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig677 1..5523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig677.17691.1 ID=prot_Ecto-sp13_S_contig677.17691.1|Name=mRNA_Ecto-sp13_S_contig677.17691.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=630bp
SECITIPAGSNMSGIYPRQWADRKKQQAPARKRRLVTYTMQPLNEQPGHR
FGVNRILRLGEDSLLSAGRDGVIRLWDVSSMLDQAAARGSAGGGRRDDAD
DADEHQPQHPQPPCTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDL
AAADRARNTDKGGREAAAAAAAAAAVVAARRMEVGGRDEEDYRRWGLGGR
GEEAAGEANGSGTGMHGVQDAAARAAASNRRTPPLPPPPPPPRPSALATV
AGHGDYVKCLTYAEQHGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGAA
DGGGSDGGWGAGAGSASNNAMMNSAGYSPAAGRQLGGGQRQGAGAPWLSD
EGEGGWTHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADAS
LVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVS
GSSDGTIRVWDVRQQCCLGVYELPGGSVWAMQPSPCDLDVYYSGGRGRRV
YRTDFRTGESSLVCVTDSEVLDMELELGRGGGTDSTGPYEQPMSMWLSST
QPHIALWGGEASGGGLALRSGRPAASAVVTAAAADGDGDRAEEDDMDMDV
FDVTPPFAEYPAEGEGEAGGMGGEGGGCLL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf