mRNA_Ecto-sp13_S_contig67555.17674.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: D7FJS4_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJS4_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 2.900e-23 Identity = 44/45 (97.78%), Postives = 45/45 (100.00%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEV 135
QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPE+
Sbjct: 299 QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEI 343
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: A0A835YJE2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJE2_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 3.940e-17 Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEVR 138
QPTRS GDAYLKY EFN + G HRSAGR LPPPYTPPYITA+PEV+
Sbjct: 235 QPTRSLGDAYLKYSEFNREAGAHRSAGRHLPPPYTPPYITADPEVQ 280
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: A0A7S2V900_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V900_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 9.590e-15 Identity = 36/51 (70.59%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEGT------HRSAGRFLPPPYTPPYITAEPEV 135
QPTRS GDAYLKYPEFNG G H+S GR +PPPYTPPYITA PEV
Sbjct: 280 QPTRSIGDAYLKYPEFNGPPGQPAGVERHKSRGRHIPPPYTPPYITARPEV 330
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: W7TS31_9STRA (Protein phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TS31_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 4.470e-14 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEG-THRSAGRFLPPPYTPPYITAEPEVR 138
QPTR+ GDAYLKY EFNG+ + SAGR++PPPYTPPYITA PEVR
Sbjct: 147 QPTRALGDAYLKYSEFNGRPNRSDSSAGRYIPPPYTPPYITATPEVR 193
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: A0A4D9D382_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D382_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 6.650e-14 Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEG-THRSAGRFLPPPYTPPYITAEPEVR 138
QPTR+ GDAYLKY EFNG+ + SAGR++PPPYTPPYITA PEVR
Sbjct: 563 QPTRALGDAYLKYSEFNGRPNRSDSSAGRYIPPPYTPPYITATPEVR 609
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: A0A2R5GGL4_9STRA (Protein phosphatase 2C 29 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGL4_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.510e-11 Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEVRPR 144
QPTR+FGD YLKY EF +AGR++PPPYTPPYITA PEV+ R
Sbjct: 362 QPTRAFGDFYLKYAEFMRGAEEDAAAGRYVPPPYTPPYITATPEVQVR 409
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: A0A835YMD2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMD2_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.510e-11 Identity = 32/46 (69.57%), Postives = 33/46 (71.74%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEVR 138
QPTRS GDAYLKY EFNG G S GRFL PP T PYI EP+VR
Sbjct: 231 QPTRSLGDAYLKYGEFNGTRGQPASRGRFLDPPCTYPYILTEPQVR 276
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: A0A482STI6_9ARCH (Protein serine/threonine phosphatase 2C family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STI6_9ARCH) HSP 1 Score: 62.8 bits (151), Expect = 2.560e-10 Identity = 27/45 (60.00%), Postives = 33/45 (73.33%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEV 135
Q TRS GDAYLKY EFNG ++ GR +P PYTPPY++ EPE+
Sbjct: 222 QLTRSLGDAYLKYSEFNGSSDANKPVGRHIPEPYTPPYVSHEPEL 266
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: A0A024GCJ0_9STRA (PPM-type phosphatase domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GCJ0_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 3.000e-10 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEGTH--RSAGRFLPPPYTPPYITAEPEV 135
QPTR+FGD LK EFNG + RSAGR +PPPYTPPYIT++PEV
Sbjct: 256 QPTRAFGDFTLKLSEFNGPPYVNGDRSAGRHIPPPYTPPYITSKPEV 302
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Match: A0A7S3MDA6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MDA6_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 4.090e-10 Identity = 26/45 (57.78%), Postives = 35/45 (77.78%), Query Frame = 1
Query: 1 QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEV 135
Q TRS GD YLK EFNG + HRS+GR++P PYTPPY++ +P++
Sbjct: 228 QLTRSIGDEYLKSQEFNGSKDKHRSSGRYIPHPYTPPYVSHQPDL 272 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig67555.17674.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig67555.17674.1 >prot_Ecto-sp13_S_contig67555.17674.1 ID=prot_Ecto-sp13_S_contig67555.17674.1|Name=mRNA_Ecto-sp13_S_contig67555.17674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=48bp QPTRSFGDAYLKYPEFNGKEGTHRSAGRFLPPPYTPPYITAEPEVRPRback to top mRNA from alignment at Ecto-sp13_S_contig67555:96..239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig67555.17674.1 ID=mRNA_Ecto-sp13_S_contig67555.17674.1|Name=mRNA_Ecto-sp13_S_contig67555.17674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=144bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67555:96..239+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig67555:96..239+ >mRNA_Ecto-sp13_S_contig67555.17674.1 ID=mRNA_Ecto-sp13_S_contig67555.17674.1|Name=mRNA_Ecto-sp13_S_contig67555.17674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=144bp|location=Sequence derived from alignment at Ecto-sp13_S_contig67555:96..239+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |