prot_Ecto-sp13_S_contig675.17665.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig675.17665.1
Unique Nameprot_Ecto-sp13_S_contig675.17665.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length48
Homology
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BLAST of mRNA_Ecto-sp13_S_contig675.17665.1 vs. uniprot
Match: D7FR33_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR33_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 7.260e-15
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0 
Query:    1 ALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPSESAE 37
            ALGE LRLALAQSGVEWIDNR+  EEWPTLKPSESAE
Sbjct:   13 ALGEPLRLALAQSGVEWIDNRLPSEEWPTLKPSESAE 49
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BLAST of mRNA_Ecto-sp13_S_contig675.17665.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 8.700e-14
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:    1 ALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPS 33
            ALGEQLRLALAQSGVEWIDNRVTFEEWPTLKP+
Sbjct:   13 ALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPT 45
[Close]
BLAST of mRNA_Ecto-sp13_S_contig675.17665.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI)

HSP 1 Score: 62.0 bits (149), Expect = 2.050e-10
Identity = 28/33 (84.85%), Postives = 30/33 (90.91%), Query Frame = 0 
Query:    1 ALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPS 33
            ALGE LRLALAQSGVEWIDNRV  E+WPTLKP+
Sbjct:   13 ALGEPLRLALAQSGVEWIDNRVPSEQWPTLKPT 45
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig675.17665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FR33_ECTSI7.260e-1589.19Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D8LK37_ECTSI8.700e-1496.97Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
D8LHF0_ECTSI2.050e-1084.85Glutathione S-transferase n=1 Tax=Ectocarpus silic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1050.130coord: 1..42
e-value: 2.2E-8
score: 36.1
IPR004045Glutathione S-transferase, N-terminalPROSITEPS50404GST_NTERcoord: 1..47
score: 10.088

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig675contigEcto-sp13_S_contig675:2704..2847 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig675.17665.1mRNA_Ecto-sp13_S_contig675.17665.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig675 2704..2847 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig675.17665.1 ID=prot_Ecto-sp13_S_contig675.17665.1|Name=mRNA_Ecto-sp13_S_contig675.17665.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=48bp
ALGEQLRLALAQSGVEWIDNRVTFEEWPTLKPSESAERGGSVLLFLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N