prot_Ecto-sp13_S_contig6745.17659.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6745.17659.1
Unique Nameprot_Ecto-sp13_S_contig6745.17659.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length258
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6745.17659.1 vs. uniprot
Match: D8LJ37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ37_ECTSI)

HSP 1 Score: 223 bits (569), Expect = 1.750e-69
Identity = 207/257 (80.54%), Postives = 210/257 (81.71%), Query Frame = 0 
Query:    1 MDPSADTTPPVAVSAAEAGSSAVDLAVSSSGGVGEAVAKGETTAVSGTAASAVVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFACAGVAAAVPGEAVMGEGLGAGKTSHGAGAXXXESPKPKKDEHADKHADLKKNAMKAVKMAYSQYKKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDMMDSIKGMLGSLGMDSDLSLTKMAHSFGLGXXXXXXXXXXXXEDD 257
            MDPSADTTPPVAV AAEA SSAVD AVSSSGGV EAVAKGETTAVSGTAA A+VA                                  D A AGVAAAVPGEAVMGEGLGAGK SHG GA   ESPKPKKDEHADKHADLKKNAMKAVKMAYSQYKKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDMMDSIKGMLGSLGMDSD+SL+KMAHSFGLGXXXXXXXXXXX EDD
Sbjct:    1 MDPSADTTPPVAVGAAEAASSAVDPAVSSSGGVAEAVAKGETTAVSGTAAPAMVASSPATGSEPVADAAVTPGGTTSSVPVGTSPAHKGDGAGAGVAAAVPGEAVMGEGLGAGKMSHGVGAAAAESPKPKKDEHADKHADLKKNAMKAVKMAYSQYKKHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDMMDSIKGMLGSLGMDSDISLSKMAHSFGLGXXXXXXXXXXXAEDD 257
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6745.17659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJ37_ECTSI1.750e-6980.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6745contigEcto-sp13_S_contig6745:239..3185 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6745.17659.1mRNA_Ecto-sp13_S_contig6745.17659.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6745 239..3390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6745.17659.1 ID=prot_Ecto-sp13_S_contig6745.17659.1|Name=mRNA_Ecto-sp13_S_contig6745.17659.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=258bp
MDPSADTTPPVAVSAAEAGSSAVDLAVSSSGGVGEAVAKGETTAVSGTAA
SAVVASAPATGSEPVADAAATPGGTTSSVPVGMSPAHGGDFACAGVAAAV
PGEAVMGEGLGAGKTSHGAGAAAAESPKPKKDEHADKHADLKKNAMKAVK
MAYSQYKKHKKKKKKKKKYGSSNHGSSSSGGGSHAVSDIMSGIGGGDGGE
SSSSSSSDDDGDMMDSIKGMLGSLGMDSDLSLTKMAHSFGLGGDGSSSSS
SSEAEDD*
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