prot_Ecto-sp13_S_contig674.17652.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig674.17652.1
Unique Nameprot_Ecto-sp13_S_contig674.17652.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length382
Homology
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BLAST of mRNA_Ecto-sp13_S_contig674.17652.1 vs. uniprot
Match: D8LEP2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP2_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 6.070e-80
Identity = 165/198 (83.33%), Postives = 168/198 (84.85%), Query Frame = 0 
Query:  157 GDRADKGQDAAAXXXXXXXXXXXXXEMIRIRAGGGAGGEGTTDLVALSRSTLESHLRLFLASQQRVGALEEEVAGARREASAGAGAKQALSLHVSEG--GTDAIVDKVAGASAQHRFPHGATLTGTLTFAELPAVAPAAGGGDFVLDGRGSAGRAAVGKGGLEIMRAERKQEGWGSGASGIAGEVQRPSILHQKMDTG 352
            GD ADKGQ     XXXXXXXXXXXX MIRIRAGGGAGGE TTDLVALSRSTLESHLRLFL SQQRVGALEEE+A ARREASAGAGAK    LHVSEG  GTDAIVDKVAGA AQ RF HGATLTG  T AELPAVAPAAGGGDFV DGRGSAGRAAVGKGGLEIMRAE+KQEGWGS ASGIAGE+Q P ILH K   G
Sbjct:   21 GDGADKGQ----AXXXXXXXXXXXXXMIRIRAGGGAGGEDTTDLVALSRSTLESHLRLFLTSQQRVGALEEEIAAARREASAGAGAKP---LHVSEGEGGTDAIVDKVAGACAQQRFLHGATLTGIPTVAELPAVAPAAGGGDFVRDGRGSAGRAAVGKGGLEIMRAEKKQEGWGSAASGIAGELQHPFILHGKWTPG 211
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig674.17652.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LEP2_ECTSI6.070e-8083.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 110..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig674contigEcto-sp13_S_contig674:8700..11050 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig674.17652.1mRNA_Ecto-sp13_S_contig674.17652.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig674 8152..11309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig674.17652.1 ID=prot_Ecto-sp13_S_contig674.17652.1|Name=mRNA_Ecto-sp13_S_contig674.17652.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=382bp
MEPPFTRRFVVKTHRPEAPDDQKQFIERLQQTVVFKISQILNTMINRPQH
TGIDGTGETSPNPFEERSTETSGRANKDERIQAINLEILEEIQQTFSKVA
AAQNDKVFQAEGLLKEAQRKQNILEKVIEEKDREIERRLPPDGIDVPTET
QQSLDFGDRADKGQDAAAAAAAAAAAAASKGEMIRIRAGGGAGGEGTTDL
VALSRSTLESHLRLFLASQQRVGALEEEVAGARREASAGAGAKQALSLHV
SEGGTDAIVDKVAGASAQHRFPHGATLTGTLTFAELPAVAPAAGGGDFVL
DGRGSAGRAAVGKGGLEIMRAERKQEGWGSGASGIAGEVQRPSILHQKMD
TGVEEIRATPVAEAAAETAGCEPARWRRGGV*
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